Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 AL096840.1-201ENST00000603287 93 ntBASIC2.23□□□□□ -2.05
NOD1Q9Y239 AC006160.2-201ENST00000637708 154 ntBASIC2.23□□□□□ -2.05
NOD1Q9Y239 Y_RNA.57-201ENST00000362806 113 ntBASIC2.22□□□□□ -2.05
NOD1Q9Y239 RNU6-580P-201ENST00000365159 107 ntBASIC2.22□□□□□ -2.05
NOD1Q9Y239 RNU6-787P-201ENST00000384032 107 ntBASIC2.22□□□□□ -2.05
NOD1Q9Y239 Y_RNA.437-201ENST00000384113 113 ntBASIC2.22□□□□□ -2.05
NOD1Q9Y239 RNA5SP402-201ENST00000517148 110 ntBASIC2.22□□□□□ -2.05
NOD1Q9Y239 RNU6-165P-201ENST00000517170 99 ntBASIC2.22□□□□□ -2.05
NOD1Q9Y239 AL137847.3-201ENST00000611521 109 ntBASIC2.22□□□□□ -2.05
NOD1Q9Y239 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
NOD1Q9Y239 RNU6-571P-201ENST00000384128 107 ntBASIC2.21□□□□□ -2.06
NOD1Q9Y239 MIR4666B-201ENST00000578142 81 ntBASIC2.21□□□□□ -2.06
NOD1Q9Y239 AL359851.1-201ENST00000569460 4997 ntBASIC2.21□□□□□ -2.06
NOD1Q9Y239 AC008163.1-202ENST00000636004 2889 ntBASIC2.21□□□□□ -2.06
NOD1Q9Y239 SNORD115-27-201ENST00000364430 82 ntBASIC2.2□□□□□ -2.06
NOD1Q9Y239 SNORD93-201ENST00000408813 74 ntBASIC2.2□□□□□ -2.06
NOD1Q9Y239 RNU6-519P-201ENST00000410590 108 ntBASIC2.2□□□□□ -2.06
NOD1Q9Y239 MIR18B-201ENST00000454574 71 ntBASIC2.2□□□□□ -2.06
NOD1Q9Y239 AL512310.8-201ENST00000550183 120 ntBASIC2.2□□□□□ -2.06
NOD1Q9Y239 MIR3198-2-201ENST00000577868 80 ntBASIC2.2□□□□□ -2.06
NOD1Q9Y239 ZNF355P-201ENST00000427301 3216 ntBASIC2.19□□□□□ -2.06
NOD1Q9Y239 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
NOD1Q9Y239 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
NOD1Q9Y239 MIR4491-201ENST00000581087 68 ntBASIC2.19□□□□□ -2.06
NOD1Q9Y239 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.19□□□□□ -2.06
NOD1Q9Y239 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
NOD1Q9Y239 Y_RNA.313-201ENST00000365095 103 ntBASIC2.18□□□□□ -2.06
NOD1Q9Y239 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
NOD1Q9Y239 MIR5002-201ENST00000584713 97 ntBASIC2.18□□□□□ -2.06
NOD1Q9Y239 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
NOD1Q9Y239 RNU6-53P-201ENST00000365367 106 ntBASIC2.17□□□□□ -2.06
NOD1Q9Y239 RNU6-531P-201ENST00000516694 104 ntBASIC2.17□□□□□ -2.06
NOD1Q9Y239 SNORA25.16-201ENST00000516741 121 ntBASIC2.17□□□□□ -2.06
NOD1Q9Y239 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.17□□□□□ -2.06
NOD1Q9Y239 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
NOD1Q9Y239 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
NOD1Q9Y239 RNU4-58P-201ENST00000363192 141 ntBASIC2.16□□□□□ -2.06
NOD1Q9Y239 Y_RNA.164-201ENST00000363709 102 ntBASIC2.16□□□□□ -2.06
NOD1Q9Y239 RNU1-36P-201ENST00000365130 165 ntBASIC2.16□□□□□ -2.06
NOD1Q9Y239 MIR519C-201ENST00000385053 87 ntBASIC2.16□□□□□ -2.06
NOD1Q9Y239 Y_RNA.588-201ENST00000391254 102 ntBASIC2.16□□□□□ -2.06
NOD1Q9Y239 RNA5SP489-201ENST00000410986 109 ntBASIC2.16□□□□□ -2.06
NOD1Q9Y239 RNA5SP395-201ENST00000516567 118 ntBASIC2.16□□□□□ -2.06
NOD1Q9Y239 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.16□□□□□ -2.06
NOD1Q9Y239 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.16□□□□□ -2.06
NOD1Q9Y239 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
NOD1Q9Y239 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
NOD1Q9Y239 RNU6-403P-201ENST00000363163 104 ntBASIC2.15□□□□□ -2.07
NOD1Q9Y239 Y_RNA.330-201ENST00000365230 109 ntBASIC2.15□□□□□ -2.07
NOD1Q9Y239 SNORA72.6-201ENST00000384520 129 ntBASIC2.15□□□□□ -2.07
NOD1Q9Y239 Y_RNA.607-201ENST00000410597 98 ntBASIC2.15□□□□□ -2.07
NOD1Q9Y239 AC087499.7-201ENST00000441958 109 ntBASIC2.15□□□□□ -2.07
NOD1Q9Y239 AC048334.1-201ENST00000477975 159 ntBASIC2.15□□□□□ -2.07
NOD1Q9Y239 AC023790.1-201ENST00000482174 347 ntBASIC2.15□□□□□ -2.07
NOD1Q9Y239 MIR514B-201ENST00000516774 80 ntBASIC2.15□□□□□ -2.07
NOD1Q9Y239 AL512598.1-201ENST00000610158 273 ntBASIC2.15□□□□□ -2.07
NOD1Q9Y239 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.15□□□□□ -2.07
NOD1Q9Y239 RNU6-524P-201ENST00000384270 107 ntBASIC2.14□□□□□ -2.07
NOD1Q9Y239 RNU6-1054P-201ENST00000411293 104 ntBASIC2.14□□□□□ -2.07
NOD1Q9Y239 snoU13.21-201ENST00000459368 105 ntBASIC2.14□□□□□ -2.07
NOD1Q9Y239 AC008834.1-201ENST00000511612 175 ntBASIC2.14□□□□□ -2.07
NOD1Q9Y239 SNORA25.15-201ENST00000516487 89 ntBASIC2.14□□□□□ -2.07
NOD1Q9Y239 RN7SKP88-201ENST00000516847 250 ntBASIC2.14□□□□□ -2.07
NOD1Q9Y239 7SK.8-201ENST00000612110 250 ntBASIC2.14□□□□□ -2.07
NOD1Q9Y239 7SK.11-201ENST00000615477 250 ntBASIC2.14□□□□□ -2.07
NOD1Q9Y239 7SK.13-201ENST00000622040 250 ntBASIC2.14□□□□□ -2.07
NOD1Q9Y239 AC023934.1-201ENST00000574529 2389 ntBASIC2.14□□□□□ -2.07
NOD1Q9Y239 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
NOD1Q9Y239 RNU1-78P-201ENST00000391248 165 ntBASIC2.13□□□□□ -2.07
NOD1Q9Y239 RPS27P16-201ENST00000425758 201 ntBASIC2.13□□□□□ -2.07
NOD1Q9Y239 AC104435.1-201ENST00000483483 166 ntBASIC2.13□□□□□ -2.07
NOD1Q9Y239 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.13□□□□□ -2.07
NOD1Q9Y239 RNU6-652P-201ENST00000365488 107 ntBASIC2.12□□□□□ -2.07
NOD1Q9Y239 MIR516A2-201ENST00000384888 90 ntBASIC2.12□□□□□ -2.07
NOD1Q9Y239 MIR516A1-201ENST00000385033 90 ntBASIC2.12□□□□□ -2.07
NOD1Q9Y239 RNA5SP247-201ENST00000411181 105 ntBASIC2.12□□□□□ -2.07
NOD1Q9Y239 AC108667.1-201ENST00000428618 249 ntBASIC2.12□□□□□ -2.07
NOD1Q9Y239 SNORD4B-201ENST00000459083 72 ntBASIC2.12□□□□□ -2.07
NOD1Q9Y239 RNU7-185P-201ENST00000459215 60 ntBASIC2.12□□□□□ -2.07
NOD1Q9Y239 MIR5089-201ENST00000580047 84 ntBASIC2.12□□□□□ -2.07
NOD1Q9Y239 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.11□□□□□ -2.07
NOD1Q9Y239 SNORD115-37-201ENST00000363768 82 ntBASIC2.11□□□□□ -2.07
NOD1Q9Y239 SNORD113.3-201ENST00000364630 78 ntBASIC2.11□□□□□ -2.07
NOD1Q9Y239 MIR1257-201ENST00000408490 117 ntBASIC2.11□□□□□ -2.07
NOD1Q9Y239 SNORD83.1-201ENST00000411362 77 ntBASIC2.11□□□□□ -2.07
NOD1Q9Y239 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.11□□□□□ -2.07
NOD1Q9Y239 AC003989.2-201ENST00000440224 169 ntBASIC2.11□□□□□ -2.07
NOD1Q9Y239 Y_RNA.648-201ENST00000459455 110 ntBASIC2.11□□□□□ -2.07
NOD1Q9Y239 AC093729.1-201ENST00000513074 128 ntBASIC2.11□□□□□ -2.07
NOD1Q9Y239 RNU6-1053P-201ENST00000515930 101 ntBASIC2.11□□□□□ -2.07
NOD1Q9Y239 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.11□□□□□ -2.07
NOD1Q9Y239 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
NOD1Q9Y239 RNA5SP190-201ENST00000365222 118 ntBASIC2.1□□□□□ -2.07
NOD1Q9Y239 RNU6-279P-201ENST00000391297 101 ntBASIC2.1□□□□□ -2.07
NOD1Q9Y239 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.1□□□□□ -2.07
NOD1Q9Y239 SNORA31.2-201ENST00000516019 134 ntBASIC2.1□□□□□ -2.07
NOD1Q9Y239 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.1□□□□□ -2.07
NOD1Q9Y239 MIR4422-201ENST00000581938 83 ntBASIC2.1□□□□□ -2.07
NOD1Q9Y239 AC084768.2-201ENST00000622736 221 ntBASIC2.1□□□□□ -2.07
NOD1Q9Y239 RNU4-32P-201ENST00000363404 141 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 461.8 ms