Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 RNU1-40P-201ENST00000516816 164 ntBASIC2.33□□□□□ -2.04
EFCC1Q9HA90 RNU1-97P-201ENST00000516872 164 ntBASIC2.33□□□□□ -2.04
EFCC1Q9HA90 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
EFCC1Q9HA90 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
EFCC1Q9HA90 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.33□□□□□ -2.04
EFCC1Q9HA90 RNA5SP133-201ENST00000363368 119 ntBASIC2.32□□□□□ -2.04
EFCC1Q9HA90 RNA5SP212-201ENST00000391223 107 ntBASIC2.32□□□□□ -2.04
EFCC1Q9HA90 snoU13.2-201ENST00000459201 104 ntBASIC2.32□□□□□ -2.04
EFCC1Q9HA90 AC138749.4-201ENST00000563970 127 ntBASIC2.32□□□□□ -2.04
EFCC1Q9HA90 AL096861.1-201ENST00000610899 123 ntBASIC2.32□□□□□ -2.04
EFCC1Q9HA90 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
EFCC1Q9HA90 RNA5SP48-201ENST00000363969 126 ntBASIC2.31□□□□□ -2.04
EFCC1Q9HA90 RNY1P2-201ENST00000364820 117 ntBASIC2.31□□□□□ -2.04
EFCC1Q9HA90 SNORD41-201ENST00000386967 70 ntBASIC2.31□□□□□ -2.04
EFCC1Q9HA90 SUMO2P12-201ENST00000405924 140 ntBASIC2.31□□□□□ -2.04
EFCC1Q9HA90 SNORD13-201ENST00000459299 104 ntBASIC2.31□□□□□ -2.04
EFCC1Q9HA90 snoU13.18-201ENST00000459483 104 ntBASIC2.31□□□□□ -2.04
EFCC1Q9HA90 MIR4287-201ENST00000579398 78 ntBASIC2.31□□□□□ -2.04
EFCC1Q9HA90 MIR4712-201ENST00000583750 82 ntBASIC2.31□□□□□ -2.04
EFCC1Q9HA90 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
EFCC1Q9HA90 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
EFCC1Q9HA90 Y_RNA.119-201ENST00000363301 96 ntBASIC2.3□□□□□ -2.04
EFCC1Q9HA90 AP1B1P2-201ENST00000416196 106 ntBASIC2.3□□□□□ -2.04
EFCC1Q9HA90 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.3□□□□□ -2.04
EFCC1Q9HA90 AC087499.7-201ENST00000441958 109 ntBASIC2.3□□□□□ -2.04
EFCC1Q9HA90 SNORA25.15-201ENST00000516487 89 ntBASIC2.3□□□□□ -2.04
EFCC1Q9HA90 RNU6-850P-201ENST00000516934 103 ntBASIC2.3□□□□□ -2.04
EFCC1Q9HA90 SNRPGP19-201ENST00000603826 189 ntBASIC2.3□□□□□ -2.04
EFCC1Q9HA90 MIR6740-201ENST00000618268 113 ntBASIC2.3□□□□□ -2.04
EFCC1Q9HA90 HSBP1P2-201ENST00000299671 229 ntBASIC2.29□□□□□ -2.04
EFCC1Q9HA90 MIR1236-201ENST00000408340 102 ntBASIC2.29□□□□□ -2.04
EFCC1Q9HA90 AC073261.1-201ENST00000429409 121 ntBASIC2.29□□□□□ -2.04
EFCC1Q9HA90 AC025033.1-201ENST00000463883 194 ntBASIC2.29□□□□□ -2.04
EFCC1Q9HA90 RNU6-396P-201ENST00000365369 105 ntBASIC2.28□□□□□ -2.04
EFCC1Q9HA90 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
EFCC1Q9HA90 RNU4-62P-201ENST00000410125 130 ntBASIC2.28□□□□□ -2.04
EFCC1Q9HA90 AC244636.1-201ENST00000421152 228 ntBASIC2.28□□□□□ -2.04
EFCC1Q9HA90 JTBP1-201ENST00000441314 247 ntBASIC2.28□□□□□ -2.04
EFCC1Q9HA90 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.28□□□□□ -2.04
EFCC1Q9HA90 SNORA4-201ENST00000584302 138 ntBASIC2.28□□□□□ -2.04
EFCC1Q9HA90 MIR5002-201ENST00000584713 97 ntBASIC2.28□□□□□ -2.04
EFCC1Q9HA90 AL096840.1-201ENST00000603287 93 ntBASIC2.28□□□□□ -2.04
EFCC1Q9HA90 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
EFCC1Q9HA90 AC003989.2-201ENST00000440224 169 ntBASIC2.27□□□□□ -2.05
EFCC1Q9HA90 SNORD4B-201ENST00000459083 72 ntBASIC2.27□□□□□ -2.05
EFCC1Q9HA90 SNORA25.13-201ENST00000516395 103 ntBASIC2.27□□□□□ -2.05
EFCC1Q9HA90 AC140658.3-201ENST00000567603 271 ntBASIC2.27□□□□□ -2.05
EFCC1Q9HA90 MIR5089-201ENST00000580047 84 ntBASIC2.27□□□□□ -2.05
EFCC1Q9HA90 AL773524.1-201ENST00000614065 229 ntBASIC2.27□□□□□ -2.05
EFCC1Q9HA90 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.27□□□□□ -2.05
EFCC1Q9HA90 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.26□□□□□ -2.05
EFCC1Q9HA90 MIR676-201ENST00000390702 67 ntBASIC2.26□□□□□ -2.05
EFCC1Q9HA90 MIR1302-7-201ENST00000408841 72 ntBASIC2.26□□□□□ -2.05
EFCC1Q9HA90 RNA5SP95-201ENST00000410319 137 ntBASIC2.26□□□□□ -2.05
EFCC1Q9HA90 AL450471.1-201ENST00000447509 127 ntBASIC2.26□□□□□ -2.05
EFCC1Q9HA90 RNU7-62P-201ENST00000458856 62 ntBASIC2.26□□□□□ -2.05
EFCC1Q9HA90 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
EFCC1Q9HA90 Y_RNA.565-201ENST00000384719 101 ntBASIC2.25□□□□□ -2.05
EFCC1Q9HA90 RNU6-1165P-201ENST00000410119 107 ntBASIC2.25□□□□□ -2.05
EFCC1Q9HA90 uc_338.6-201ENST00000613544 171 ntBASIC2.25□□□□□ -2.05
EFCC1Q9HA90 MIR8063-201ENST00000621930 81 ntBASIC2.25□□□□□ -2.05
EFCC1Q9HA90 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
EFCC1Q9HA90 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
EFCC1Q9HA90 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
EFCC1Q9HA90 SNRPGP12-201ENST00000449481 213 ntBASIC2.24□□□□□ -2.05
EFCC1Q9HA90 RNU7-85P-201ENST00000458851 63 ntBASIC2.24□□□□□ -2.05
EFCC1Q9HA90 snoU13.11-201ENST00000459219 104 ntBASIC2.24□□□□□ -2.05
EFCC1Q9HA90 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.24□□□□□ -2.05
EFCC1Q9HA90 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.24□□□□□ -2.05
EFCC1Q9HA90 Y_RNA.224-201ENST00000364308 111 ntBASIC2.23□□□□□ -2.05
EFCC1Q9HA90 SNORA72.6-201ENST00000384520 129 ntBASIC2.23□□□□□ -2.05
EFCC1Q9HA90 MIR516A2-201ENST00000384888 90 ntBASIC2.23□□□□□ -2.05
EFCC1Q9HA90 MIR516A1-201ENST00000385033 90 ntBASIC2.23□□□□□ -2.05
EFCC1Q9HA90 RNU6-129P-201ENST00000391022 107 ntBASIC2.23□□□□□ -2.05
EFCC1Q9HA90 AL161935.2-201ENST00000414627 60 ntBASIC2.23□□□□□ -2.05
EFCC1Q9HA90 HSPE1P24-201ENST00000450782 238 ntBASIC2.23□□□□□ -2.05
EFCC1Q9HA90 MIR3122-201ENST00000577243 73 ntBASIC2.23□□□□□ -2.05
EFCC1Q9HA90 AL357312.1-201ENST00000603879 298 ntBASIC2.23□□□□□ -2.05
EFCC1Q9HA90 MIR30D-201ENST00000362283 70 ntBASIC2.22□□□□□ -2.05
EFCC1Q9HA90 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
EFCC1Q9HA90 MIR4299-201ENST00000577899 72 ntBASIC2.22□□□□□ -2.05
EFCC1Q9HA90 MIR4713-201ENST00000582691 75 ntBASIC2.22□□□□□ -2.05
EFCC1Q9HA90 GHRLOS.1-201ENST00000610995 70 ntBASIC2.22□□□□□ -2.05
EFCC1Q9HA90 AL627230.6-201ENST00000611129 280 ntBASIC2.22□□□□□ -2.05
EFCC1Q9HA90 RNU6-403P-201ENST00000363163 104 ntBASIC2.21□□□□□ -2.06
EFCC1Q9HA90 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
EFCC1Q9HA90 snoU13.25-201ENST00000458945 104 ntBASIC2.21□□□□□ -2.06
EFCC1Q9HA90 RNU6-531P-201ENST00000516694 104 ntBASIC2.21□□□□□ -2.06
EFCC1Q9HA90 MIR4264-201ENST00000583520 66 ntBASIC2.21□□□□□ -2.06
EFCC1Q9HA90 BX248123.2-201ENST00000606318 124 ntBASIC2.21□□□□□ -2.06
EFCC1Q9HA90 AL512598.1-201ENST00000610158 273 ntBASIC2.21□□□□□ -2.06
EFCC1Q9HA90 AC084768.2-201ENST00000622736 221 ntBASIC2.21□□□□□ -2.06
EFCC1Q9HA90 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
EFCC1Q9HA90 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
EFCC1Q9HA90 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.2□□□□□ -2.06
EFCC1Q9HA90 RNU6-478P-201ENST00000363904 110 ntBASIC2.2□□□□□ -2.06
EFCC1Q9HA90 RNU6-654P-201ENST00000364373 107 ntBASIC2.2□□□□□ -2.06
EFCC1Q9HA90 RNU6-571P-201ENST00000384128 107 ntBASIC2.2□□□□□ -2.06
EFCC1Q9HA90 MIR563-201ENST00000385080 79 ntBASIC2.2□□□□□ -2.06
EFCC1Q9HA90 SNORD93-201ENST00000408813 74 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms