Protein–RNA interactions for Protein: Q9H9J4

USP42, Ubiquitin carboxyl-terminal hydrolase 42, humanhuman

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP42Q9H9J4 AC097635.1-201ENST00000450678 155 ntBASIC-0.58□□□□□ -2.5
USP42Q9H9J4 RNU6-1338P-201ENST00000516328 91 ntBASIC-0.58□□□□□ -2.5
USP42Q9H9J4 RNU6-875P-201ENST00000516488 106 ntBASIC-0.58□□□□□ -2.5
USP42Q9H9J4 SNORA40.15-201ENST00000516884 107 ntBASIC-0.58□□□□□ -2.5
USP42Q9H9J4 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.58□□□□□ -2.5
USP42Q9H9J4 MIR369-201ENST00000362155 70 ntBASIC-0.59□□□□□ -2.5
USP42Q9H9J4 RNU6-728P-201ENST00000365375 104 ntBASIC-0.59□□□□□ -2.5
USP42Q9H9J4 Y_RNA.356-201ENST00000365475 113 ntBASIC-0.59□□□□□ -2.5
USP42Q9H9J4 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.59□□□□□ -2.5
USP42Q9H9J4 MIR624-201ENST00000385217 97 ntBASIC-0.59□□□□□ -2.5
USP42Q9H9J4 RNU6-101P-201ENST00000410323 104 ntBASIC-0.59□□□□□ -2.5
USP42Q9H9J4 Y_RNA.619-201ENST00000410951 90 ntBASIC-0.59□□□□□ -2.5
USP42Q9H9J4 RNU7-188P-201ENST00000517063 64 ntBASIC-0.59□□□□□ -2.5
USP42Q9H9J4 MIR4500-201ENST00000579472 76 ntBASIC-0.59□□□□□ -2.5
USP42Q9H9J4 MIR3681-201ENST00000580089 72 ntBASIC-0.59□□□□□ -2.5
USP42Q9H9J4 MIR4473-201ENST00000583731 91 ntBASIC-0.59□□□□□ -2.5
USP42Q9H9J4 RNU1-141P-201ENST00000364623 158 ntBASIC-0.6□□□□□ -2.5
USP42Q9H9J4 RNU6-1283P-201ENST00000365314 105 ntBASIC-0.6□□□□□ -2.5
USP42Q9H9J4 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.6□□□□□ -2.5
USP42Q9H9J4 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.6□□□□□ -2.5
USP42Q9H9J4 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.6□□□□□ -2.5
USP42Q9H9J4 SNORA79-201ENST00000408376 140 ntBASIC-0.6□□□□□ -2.5
USP42Q9H9J4 RNU4-63P-201ENST00000411313 118 ntBASIC-0.6□□□□□ -2.5
USP42Q9H9J4 SNORD116-25-201ENST00000516517 92 ntBASIC-0.6□□□□□ -2.5
USP42Q9H9J4 RNU6-570P-201ENST00000517051 105 ntBASIC-0.6□□□□□ -2.5
USP42Q9H9J4 AL442663.2-201ENST00000554385 511 ntBASIC-0.6□□□□□ -2.5
USP42Q9H9J4 AL365265.1-201ENST00000621045 234 ntBASIC-0.6□□□□□ -2.5
USP42Q9H9J4 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.61□□□□□ -2.51
USP42Q9H9J4 SNORD42.2-201ENST00000365570 69 ntBASIC-0.61□□□□□ -2.51
USP42Q9H9J4 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.61□□□□□ -2.51
USP42Q9H9J4 MIR181B2-201ENST00000385004 89 ntBASIC-0.61□□□□□ -2.51
USP42Q9H9J4 RNA5SP266-201ENST00000410273 108 ntBASIC-0.61□□□□□ -2.51
USP42Q9H9J4 RNU2-35P-201ENST00000516446 142 ntBASIC-0.61□□□□□ -2.51
USP42Q9H9J4 MIR548AG2-201ENST00000581228 64 ntBASIC-0.61□□□□□ -2.51
USP42Q9H9J4 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.62□□□□□ -2.51
USP42Q9H9J4 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.62□□□□□ -2.51
USP42Q9H9J4 Y_RNA.210-201ENST00000364161 110 ntBASIC-0.62□□□□□ -2.51
USP42Q9H9J4 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.62□□□□□ -2.51
USP42Q9H9J4 Y_RNA.276-201ENST00000364732 109 ntBASIC-0.62□□□□□ -2.51
USP42Q9H9J4 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.62□□□□□ -2.51
USP42Q9H9J4 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.62□□□□□ -2.51
USP42Q9H9J4 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.62□□□□□ -2.51
USP42Q9H9J4 RNU7-195P-201ENST00000458793 62 ntBASIC-0.62□□□□□ -2.51
USP42Q9H9J4 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.62□□□□□ -2.51
USP42Q9H9J4 RNU6-138P-201ENST00000515952 107 ntBASIC-0.62□□□□□ -2.51
USP42Q9H9J4 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.62□□□□□ -2.51
USP42Q9H9J4 IGKV1-22-201ENST00000524313 326 ntBASIC-0.62□□□□□ -2.51
USP42Q9H9J4 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.62□□□□□ -2.51
USP42Q9H9J4 MTND5P40-201ENST00000559945 246 ntBASIC-0.62□□□□□ -2.51
USP42Q9H9J4 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.62□□□□□ -2.51
USP42Q9H9J4 uc_338.10-201ENST00000621872 182 ntBASIC-0.62□□□□□ -2.51
USP42Q9H9J4 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.62□□□□□ -2.51
USP42Q9H9J4 AC139792.2-201ENST00000624218 587 ntBASIC-0.62□□□□□ -2.51
USP42Q9H9J4 Y_RNA.44-201ENST00000362676 108 ntBASIC-0.63□□□□□ -2.51
USP42Q9H9J4 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.63□□□□□ -2.51
USP42Q9H9J4 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.63□□□□□ -2.51
USP42Q9H9J4 MIR519A1-201ENST00000385257 85 ntBASIC-0.63□□□□□ -2.51
USP42Q9H9J4 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.63□□□□□ -2.51
USP42Q9H9J4 AC093423.1-201ENST00000440817 142 ntBASIC-0.63□□□□□ -2.51
USP42Q9H9J4 RNU7-74P-201ENST00000459104 62 ntBASIC-0.63□□□□□ -2.51
USP42Q9H9J4 RNU7-13P-201ENST00000516413 62 ntBASIC-0.63□□□□□ -2.51
USP42Q9H9J4 RNU6-175P-201ENST00000516896 107 ntBASIC-0.63□□□□□ -2.51
USP42Q9H9J4 RNA5SP66-201ENST00000517178 101 ntBASIC-0.63□□□□□ -2.51
USP42Q9H9J4 Y_RNA.721-201ENST00000517207 102 ntBASIC-0.63□□□□□ -2.51
USP42Q9H9J4 MIR4795-201ENST00000584182 89 ntBASIC-0.63□□□□□ -2.51
USP42Q9H9J4 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.64□□□□□ -2.51
USP42Q9H9J4 SNORA3B-201ENST00000391305 131 ntBASIC-0.64□□□□□ -2.51
USP42Q9H9J4 AL603914.1-201ENST00000401964 204 ntBASIC-0.64□□□□□ -2.51
USP42Q9H9J4 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-0.64□□□□□ -2.51
USP42Q9H9J4 AL121914.1-201ENST00000450188 156 ntBASIC-0.64□□□□□ -2.51
USP42Q9H9J4 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-0.64□□□□□ -2.51
USP42Q9H9J4 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.64□□□□□ -2.51
USP42Q9H9J4 RNA5SP169-201ENST00000517268 117 ntBASIC-0.64□□□□□ -2.51
USP42Q9H9J4 MIR548AE1-201ENST00000583292 70 ntBASIC-0.64□□□□□ -2.51
USP42Q9H9J4 RNU6-524P-201ENST00000384270 107 ntBASIC-0.64□□□□□ -2.51
USP42Q9H9J4 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.64□□□□□ -2.51
USP42Q9H9J4 RNU6-455P-201ENST00000384681 107 ntBASIC-0.64□□□□□ -2.51
USP42Q9H9J4 MIR206-201ENST00000384872 86 ntBASIC-0.64□□□□□ -2.51
USP42Q9H9J4 MIR519E-201ENST00000385075 84 ntBASIC-0.64□□□□□ -2.51
USP42Q9H9J4 SNORD63B-201ENST00000411005 70 ntBASIC-0.64□□□□□ -2.51
USP42Q9H9J4 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.64□□□□□ -2.51
USP42Q9H9J4 RNA5SP236-201ENST00000516169 116 ntBASIC-0.64□□□□□ -2.51
USP42Q9H9J4 AP001328.1-201ENST00000528550 176 ntBASIC-0.64□□□□□ -2.51
USP42Q9H9J4 YWHAEP2-201ENST00000580066 112 ntBASIC-0.64□□□□□ -2.51
USP42Q9H9J4 MIR4282-201ENST00000583613 67 ntBASIC-0.64□□□□□ -2.51
USP42Q9H9J4 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.65□□□□□ -2.51
USP42Q9H9J4 RNU4-17P-201ENST00000365598 141 ntBASIC-0.65□□□□□ -2.51
USP42Q9H9J4 Y_RNA.419-201ENST00000384041 102 ntBASIC-0.65□□□□□ -2.51
USP42Q9H9J4 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.65□□□□□ -2.51
USP42Q9H9J4 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.65□□□□□ -2.51
USP42Q9H9J4 MIR548I2-201ENST00000408348 149 ntBASIC-0.65□□□□□ -2.51
USP42Q9H9J4 RNU7-48P-201ENST00000458875 63 ntBASIC-0.65□□□□□ -2.51
USP42Q9H9J4 RNU7-106P-201ENST00000459514 67 ntBASIC-0.65□□□□□ -2.51
USP42Q9H9J4 AC113195.1-201ENST00000579952 141 ntBASIC-0.65□□□□□ -2.51
USP42Q9H9J4 AC069503.3-201ENST00000618674 145 ntBASIC-0.65□□□□□ -2.51
USP42Q9H9J4 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.66□□□□□ -2.52
USP42Q9H9J4 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.66□□□□□ -2.52
USP42Q9H9J4 SNORD114-29-201ENST00000364819 70 ntBASIC-0.66□□□□□ -2.52
USP42Q9H9J4 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.66□□□□□ -2.52
USP42Q9H9J4 MIR539-201ENST00000365690 78 ntBASIC-0.66□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms