Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF39Q9H2S5 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RNF39Q9H2S5 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
RNF39Q9H2S5 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
RNF39Q9H2S5 Y_RNA.174-201ENST00000363781 105 ntBASIC3.66□□□□□ -1.82
RNF39Q9H2S5 SNORA48.2-201ENST00000390926 124 ntBASIC3.66□□□□□ -1.82
RNF39Q9H2S5 MIR938-201ENST00000401216 83 ntBASIC3.66□□□□□ -1.82
RNF39Q9H2S5 RNA5SP100-201ENST00000410903 110 ntBASIC3.66□□□□□ -1.82
RNF39Q9H2S5 RNA5SP59-201ENST00000410922 110 ntBASIC3.66□□□□□ -1.82
RNF39Q9H2S5 UBBP3-201ENST00000445497 241 ntBASIC3.66□□□□□ -1.82
RNF39Q9H2S5 5S_rRNA.3-201ENST00000517021 110 ntBASIC3.66□□□□□ -1.82
RNF39Q9H2S5 MIR548AG1-201ENST00000579932 66 ntBASIC3.66□□□□□ -1.82
RNF39Q9H2S5 MIR4298-201ENST00000584380 73 ntBASIC3.66□□□□□ -1.82
RNF39Q9H2S5 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.66□□□□□ -1.82
RNF39Q9H2S5 5S_rRNA.19-201ENST00000612131 110 ntBASIC3.66□□□□□ -1.82
RNF39Q9H2S5 5S_rRNA.18-201ENST00000621941 110 ntBASIC3.66□□□□□ -1.82
RNF39Q9H2S5 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RNF39Q9H2S5 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
RNF39Q9H2S5 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
RNF39Q9H2S5 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
RNF39Q9H2S5 RNU1-51P-201ENST00000365345 176 ntBASIC3.65□□□□□ -1.83
RNF39Q9H2S5 RPS29P31-201ENST00000446147 164 ntBASIC3.65□□□□□ -1.83
RNF39Q9H2S5 RN7SL20P-201ENST00000488827 297 ntBASIC3.65□□□□□ -1.83
RNF39Q9H2S5 U1.36-201ENST00000620684 176 ntBASIC3.65□□□□□ -1.83
RNF39Q9H2S5 MIR8057-201ENST00000620957 69 ntBASIC3.65□□□□□ -1.83
RNF39Q9H2S5 AL353746.1-201ENST00000566293 6881 ntBASIC3.65□□□□□ -1.83
RNF39Q9H2S5 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RNF39Q9H2S5 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RNF39Q9H2S5 SNORA38.1-201ENST00000364172 131 ntBASIC3.64□□□□□ -1.83
RNF39Q9H2S5 RNU6-1326P-201ENST00000391262 107 ntBASIC3.64□□□□□ -1.83
RNF39Q9H2S5 MIR5680-201ENST00000577577 84 ntBASIC3.64□□□□□ -1.83
RNF39Q9H2S5 MIR4738-201ENST00000579134 87 ntBASIC3.64□□□□□ -1.83
RNF39Q9H2S5 uc_338.16-201ENST00000621804 95 ntBASIC3.64□□□□□ -1.83
RNF39Q9H2S5 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
RNF39Q9H2S5 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.64□□□□□ -1.83
RNF39Q9H2S5 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RNF39Q9H2S5 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RNF39Q9H2S5 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC3.63□□□□□ -1.83
RNF39Q9H2S5 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC3.63□□□□□ -1.83
RNF39Q9H2S5 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.62□□□□□ -1.83
RNF39Q9H2S5 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RNF39Q9H2S5 SNORD113.3-201ENST00000364630 78 ntBASIC3.62□□□□□ -1.83
RNF39Q9H2S5 Y_RNA.345-201ENST00000365384 92 ntBASIC3.62□□□□□ -1.83
RNF39Q9H2S5 RNU1-148P-201ENST00000384472 162 ntBASIC3.62□□□□□ -1.83
RNF39Q9H2S5 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.62□□□□□ -1.83
RNF39Q9H2S5 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RNF39Q9H2S5 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.61□□□□□ -1.83
RNF39Q9H2S5 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RNF39Q9H2S5 RNA5SP374-201ENST00000362939 125 ntBASIC3.61□□□□□ -1.83
RNF39Q9H2S5 MIR128-1-201ENST00000384921 82 ntBASIC3.61□□□□□ -1.83
RNF39Q9H2S5 AC022018.1-201ENST00000430685 241 ntBASIC3.61□□□□□ -1.83
RNF39Q9H2S5 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RNF39Q9H2S5 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNF39Q9H2S5 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
RNF39Q9H2S5 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNF39Q9H2S5 RNU1-141P-201ENST00000364623 158 ntBASIC3.6□□□□□ -1.83
RNF39Q9H2S5 RNU6-458P-201ENST00000384179 107 ntBASIC3.6□□□□□ -1.83
RNF39Q9H2S5 U6.58-201ENST00000613107 107 ntBASIC3.6□□□□□ -1.83
RNF39Q9H2S5 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.6□□□□□ -1.83
RNF39Q9H2S5 MIR29B1-201ENST00000385015 81 ntBASIC3.59□□□□□ -1.83
RNF39Q9H2S5 MIR1255B2-201ENST00000408618 67 ntBASIC3.59□□□□□ -1.83
RNF39Q9H2S5 AL591806.2-201ENST00000433122 173 ntBASIC3.59□□□□□ -1.83
RNF39Q9H2S5 SCARNA17.3-201ENST00000516381 125 ntBASIC3.59□□□□□ -1.83
RNF39Q9H2S5 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.84
RNF39Q9H2S5 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RNF39Q9H2S5 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
RNF39Q9H2S5 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RNF39Q9H2S5 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
RNF39Q9H2S5 RNU6-995P-201ENST00000391244 107 ntBASIC3.58□□□□□ -1.84
RNF39Q9H2S5 AL161935.2-201ENST00000414627 60 ntBASIC3.58□□□□□ -1.84
RNF39Q9H2S5 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RNF39Q9H2S5 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
RNF39Q9H2S5 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RNF39Q9H2S5 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
RNF39Q9H2S5 SNORD41.1-201ENST00000391000 69 ntBASIC3.57□□□□□ -1.84
RNF39Q9H2S5 MIR5004-201ENST00000579078 107 ntBASIC3.57□□□□□ -1.84
RNF39Q9H2S5 AC244205.2-202ENST00000635781 342 ntBASIC3.57□□□□□ -1.84
RNF39Q9H2S5 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.56□□□□□ -1.84
RNF39Q9H2S5 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.56□□□□□ -1.84
RNF39Q9H2S5 MIR2276-201ENST00000516886 89 ntBASIC3.56□□□□□ -1.84
RNF39Q9H2S5 AL021368.2-201ENST00000606125 5352 ntBASIC3.56□□□□□ -1.84
RNF39Q9H2S5 AC245166.1-201ENST00000521012 253 ntBASIC3.55□□□□□ -1.84
RNF39Q9H2S5 AC012493.3-201ENST00000604494 112 ntBASIC3.55□□□□□ -1.84
RNF39Q9H2S5 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
RNF39Q9H2S5 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
RNF39Q9H2S5 MIR125B1-201ENST00000385236 88 ntBASIC3.54□□□□□ -1.84
RNF39Q9H2S5 MIR2682-201ENST00000580305 110 ntBASIC3.54□□□□□ -1.84
RNF39Q9H2S5 uc_338.32-201ENST00000615087 172 ntBASIC3.54□□□□□ -1.84
RNF39Q9H2S5 U2.18-201ENST00000622185 84 ntBASIC3.54□□□□□ -1.84
RNF39Q9H2S5 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
RNF39Q9H2S5 MIR582-201ENST00000365731 98 ntBASIC3.53□□□□□ -1.84
RNF39Q9H2S5 RNU7-40P-201ENST00000516397 64 ntBASIC3.53□□□□□ -1.84
RNF39Q9H2S5 uc_338.1-201ENST00000612113 180 ntBASIC3.53□□□□□ -1.84
RNF39Q9H2S5 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.53□□□□□ -1.84
RNF39Q9H2S5 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.53□□□□□ -1.84
RNF39Q9H2S5 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
RNF39Q9H2S5 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
RNF39Q9H2S5 RNU6-598P-201ENST00000364017 105 ntBASIC3.52□□□□□ -1.85
RNF39Q9H2S5 MIR548E-201ENST00000408287 88 ntBASIC3.52□□□□□ -1.85
RNF39Q9H2S5 MIR548L-201ENST00000408303 86 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms