Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 AL161935.2-201ENST00000414627 60 ntBASIC2.37□□□□□ -2.03
NUCKS1Q9H1E3 RN7SL429P-201ENST00000479090 223 ntBASIC2.37□□□□□ -2.03
NUCKS1Q9H1E3 RN7SL489P-201ENST00000486185 223 ntBASIC2.37□□□□□ -2.03
NUCKS1Q9H1E3 RN7SL327P-201ENST00000488659 223 ntBASIC2.37□□□□□ -2.03
NUCKS1Q9H1E3 RNU6-922P-201ENST00000516753 99 ntBASIC2.37□□□□□ -2.03
NUCKS1Q9H1E3 RN7SL853P-201ENST00000617250 223 ntBASIC2.37□□□□□ -2.03
NUCKS1Q9H1E3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
NUCKS1Q9H1E3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.36□□□□□ -2.03
NUCKS1Q9H1E3 RNU6-957P-201ENST00000363652 99 ntBASIC2.36□□□□□ -2.03
NUCKS1Q9H1E3 SNORA16B-201ENST00000364674 135 ntBASIC2.36□□□□□ -2.03
NUCKS1Q9H1E3 MIR513A1-201ENST00000385138 129 ntBASIC2.36□□□□□ -2.03
NUCKS1Q9H1E3 RNU7-62P-201ENST00000458856 62 ntBASIC2.36□□□□□ -2.03
NUCKS1Q9H1E3 RNU6-531P-201ENST00000516694 104 ntBASIC2.36□□□□□ -2.03
NUCKS1Q9H1E3 uc_338.20-201ENST00000621563 178 ntBASIC2.36□□□□□ -2.03
NUCKS1Q9H1E3 RNU6-649P-201ENST00000384463 107 ntBASIC2.35□□□□□ -2.03
NUCKS1Q9H1E3 MIR221-201ENST00000385135 110 ntBASIC2.35□□□□□ -2.03
NUCKS1Q9H1E3 MIR518E-201ENST00000385252 88 ntBASIC2.35□□□□□ -2.03
NUCKS1Q9H1E3 MT-TF-201ENST00000387314 71 ntBASIC2.35□□□□□ -2.03
NUCKS1Q9H1E3 SNORD63B-201ENST00000411005 70 ntBASIC2.35□□□□□ -2.03
NUCKS1Q9H1E3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
NUCKS1Q9H1E3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
NUCKS1Q9H1E3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
NUCKS1Q9H1E3 MT-TN-201ENST00000387400 73 ntBASIC2.34□□□□□ -2.03
NUCKS1Q9H1E3 Y_RNA.596-201ENST00000410462 109 ntBASIC2.34□□□□□ -2.03
NUCKS1Q9H1E3 AC025033.1-201ENST00000463883 194 ntBASIC2.34□□□□□ -2.03
NUCKS1Q9H1E3 SNORA25.16-201ENST00000516741 121 ntBASIC2.34□□□□□ -2.03
NUCKS1Q9H1E3 RNU1-40P-201ENST00000516816 164 ntBASIC2.34□□□□□ -2.03
NUCKS1Q9H1E3 RNU1-97P-201ENST00000516872 164 ntBASIC2.34□□□□□ -2.03
NUCKS1Q9H1E3 SNORA31.25-201ENST00000517242 134 ntBASIC2.34□□□□□ -2.03
NUCKS1Q9H1E3 MIR5002-201ENST00000584713 97 ntBASIC2.34□□□□□ -2.03
NUCKS1Q9H1E3 Y_RNA.12-201ENST00000362393 112 ntBASIC2.33□□□□□ -2.04
NUCKS1Q9H1E3 RNU6-540P-201ENST00000384622 101 ntBASIC2.33□□□□□ -2.04
NUCKS1Q9H1E3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.33□□□□□ -2.04
NUCKS1Q9H1E3 snoU13.25-201ENST00000458945 104 ntBASIC2.33□□□□□ -2.04
NUCKS1Q9H1E3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.33□□□□□ -2.04
NUCKS1Q9H1E3 MIR4491-201ENST00000581087 68 ntBASIC2.33□□□□□ -2.04
NUCKS1Q9H1E3 RNU4-58P-201ENST00000363192 141 ntBASIC2.32□□□□□ -2.04
NUCKS1Q9H1E3 RN7SKP223-201ENST00000410582 62 ntBASIC2.32□□□□□ -2.04
NUCKS1Q9H1E3 RNU6-1194P-201ENST00000516208 104 ntBASIC2.32□□□□□ -2.04
NUCKS1Q9H1E3 MIR2115-201ENST00000516657 100 ntBASIC2.32□□□□□ -2.04
NUCKS1Q9H1E3 YWHAEP2-201ENST00000580066 112 ntBASIC2.32□□□□□ -2.04
NUCKS1Q9H1E3 MIR3945-201ENST00000581853 98 ntBASIC2.32□□□□□ -2.04
NUCKS1Q9H1E3 YWHAEP3-201ENST00000582767 121 ntBASIC2.32□□□□□ -2.04
NUCKS1Q9H1E3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
NUCKS1Q9H1E3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NUCKS1Q9H1E3 RNU6-53P-201ENST00000365367 106 ntBASIC2.31□□□□□ -2.04
NUCKS1Q9H1E3 U8.13-201ENST00000390842 128 ntBASIC2.31□□□□□ -2.04
NUCKS1Q9H1E3 Y_RNA.588-201ENST00000391254 102 ntBASIC2.31□□□□□ -2.04
NUCKS1Q9H1E3 SNORD30.1-201ENST00000391309 70 ntBASIC2.31□□□□□ -2.04
NUCKS1Q9H1E3 RNU2-59P-201ENST00000410482 191 ntBASIC2.31□□□□□ -2.04
NUCKS1Q9H1E3 snoU13.17-201ENST00000458802 104 ntBASIC2.31□□□□□ -2.04
NUCKS1Q9H1E3 RPL30P7-201ENST00000479312 323 ntBASIC2.31□□□□□ -2.04
NUCKS1Q9H1E3 RN7SL274P-201ENST00000492268 272 ntBASIC2.31□□□□□ -2.04
NUCKS1Q9H1E3 RNU1-41P-201ENST00000516161 162 ntBASIC2.31□□□□□ -2.04
NUCKS1Q9H1E3 RNU1-48P-201ENST00000516400 162 ntBASIC2.31□□□□□ -2.04
NUCKS1Q9H1E3 RNU7-193P-201ENST00000516723 65 ntBASIC2.31□□□□□ -2.04
NUCKS1Q9H1E3 RNA5SP364-201ENST00000516938 78 ntBASIC2.31□□□□□ -2.04
NUCKS1Q9H1E3 MIR4529-201ENST00000578110 78 ntBASIC2.31□□□□□ -2.04
NUCKS1Q9H1E3 AL096840.1-201ENST00000603287 93 ntBASIC2.31□□□□□ -2.04
NUCKS1Q9H1E3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
NUCKS1Q9H1E3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.31□□□□□ -2.04
NUCKS1Q9H1E3 Y_RNA.205-201ENST00000364128 113 ntBASIC2.3□□□□□ -2.04
NUCKS1Q9H1E3 SNORA70B-201ENST00000384210 135 ntBASIC2.3□□□□□ -2.04
NUCKS1Q9H1E3 RNU6-1241P-201ENST00000384536 107 ntBASIC2.3□□□□□ -2.04
NUCKS1Q9H1E3 RNA5SP425-201ENST00000410336 112 ntBASIC2.3□□□□□ -2.04
NUCKS1Q9H1E3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.3□□□□□ -2.04
NUCKS1Q9H1E3 AL356320.1-201ENST00000429616 163 ntBASIC2.3□□□□□ -2.04
NUCKS1Q9H1E3 JTBP1-201ENST00000441314 247 ntBASIC2.3□□□□□ -2.04
NUCKS1Q9H1E3 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.3□□□□□ -2.04
NUCKS1Q9H1E3 MIR6516-201ENST00000630554 81 ntBASIC2.3□□□□□ -2.04
NUCKS1Q9H1E3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
NUCKS1Q9H1E3 U8.2-201ENST00000363156 134 ntBASIC2.29□□□□□ -2.04
NUCKS1Q9H1E3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
NUCKS1Q9H1E3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.29□□□□□ -2.04
NUCKS1Q9H1E3 RNU6-717P-201ENST00000459076 104 ntBASIC2.29□□□□□ -2.04
NUCKS1Q9H1E3 MIR1273D-201ENST00000577266 86 ntBASIC2.29□□□□□ -2.04
NUCKS1Q9H1E3 MIR4298-201ENST00000584380 73 ntBASIC2.29□□□□□ -2.04
NUCKS1Q9H1E3 MIR6873-201ENST00000622788 63 ntBASIC2.29□□□□□ -2.04
NUCKS1Q9H1E3 U6.111-201ENST00000636093 83 ntBASIC2.29□□□□□ -2.04
NUCKS1Q9H1E3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
NUCKS1Q9H1E3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
NUCKS1Q9H1E3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
NUCKS1Q9H1E3 RNU6-800P-201ENST00000384473 103 ntBASIC2.28□□□□□ -2.04
NUCKS1Q9H1E3 SNORD100-201ENST00000408573 76 ntBASIC2.28□□□□□ -2.04
NUCKS1Q9H1E3 RNU6-250P-201ENST00000516958 103 ntBASIC2.28□□□□□ -2.04
NUCKS1Q9H1E3 AP003716.2-201ENST00000528260 108 ntBASIC2.28□□□□□ -2.04
NUCKS1Q9H1E3 AL627230.6-201ENST00000611129 280 ntBASIC2.28□□□□□ -2.04
NUCKS1Q9H1E3 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.28□□□□□ -2.04
NUCKS1Q9H1E3 MIR377-201ENST00000362145 69 ntBASIC2.27□□□□□ -2.05
NUCKS1Q9H1E3 Y_RNA.36-201ENST00000362602 112 ntBASIC2.27□□□□□ -2.05
NUCKS1Q9H1E3 RNU6-330P-201ENST00000363015 107 ntBASIC2.27□□□□□ -2.05
NUCKS1Q9H1E3 SNORD115-31-201ENST00000365318 82 ntBASIC2.27□□□□□ -2.05
NUCKS1Q9H1E3 RNU6-1051P-201ENST00000365471 102 ntBASIC2.27□□□□□ -2.05
NUCKS1Q9H1E3 RNU6-439P-201ENST00000384188 106 ntBASIC2.27□□□□□ -2.05
NUCKS1Q9H1E3 SNORA8.1-201ENST00000384250 140 ntBASIC2.27□□□□□ -2.05
NUCKS1Q9H1E3 MIR154-201ENST00000385243 84 ntBASIC2.27□□□□□ -2.05
NUCKS1Q9H1E3 SNORD93-201ENST00000408813 74 ntBASIC2.27□□□□□ -2.05
NUCKS1Q9H1E3 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
NUCKS1Q9H1E3 RNU7-195P-201ENST00000458793 62 ntBASIC2.27□□□□□ -2.05
NUCKS1Q9H1E3 TRAJ51-201ENST00000504127 63 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 194 ms