Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 7SK.13-201ENST00000622040 250 ntBASIC1.63□□□□□ -2.15
LRFN3Q9BTN0 MIR1245B-201ENST00000636115 69 ntBASIC1.63□□□□□ -2.15
LRFN3Q9BTN0 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.63□□□□□ -2.15
LRFN3Q9BTN0 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.63□□□□□ -2.15
LRFN3Q9BTN0 RNA5SP457-201ENST00000363657 124 ntBASIC1.62□□□□□ -2.15
LRFN3Q9BTN0 RNA5SP48-201ENST00000363969 126 ntBASIC1.62□□□□□ -2.15
LRFN3Q9BTN0 SNORA16.1-201ENST00000364597 132 ntBASIC1.62□□□□□ -2.15
LRFN3Q9BTN0 Y_RNA.467-201ENST00000384297 102 ntBASIC1.62□□□□□ -2.15
LRFN3Q9BTN0 SUMO2P12-201ENST00000405924 140 ntBASIC1.62□□□□□ -2.15
LRFN3Q9BTN0 RNU6-602P-201ENST00000411155 105 ntBASIC1.62□□□□□ -2.15
LRFN3Q9BTN0 UBL5P1-201ENST00000507979 193 ntBASIC1.62□□□□□ -2.15
LRFN3Q9BTN0 RNU7-2P-201ENST00000516096 62 ntBASIC1.62□□□□□ -2.15
LRFN3Q9BTN0 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.62□□□□□ -2.15
LRFN3Q9BTN0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
LRFN3Q9BTN0 SNORD114-27-201ENST00000363766 70 ntBASIC1.61□□□□□ -2.15
LRFN3Q9BTN0 Y_RNA.190-201ENST00000363964 101 ntBASIC1.61□□□□□ -2.15
LRFN3Q9BTN0 Y_RNA.247-201ENST00000364500 92 ntBASIC1.61□□□□□ -2.15
LRFN3Q9BTN0 MIR206-201ENST00000384872 86 ntBASIC1.61□□□□□ -2.15
LRFN3Q9BTN0 MIR216A-201ENST00000385063 110 ntBASIC1.61□□□□□ -2.15
LRFN3Q9BTN0 RNU6-1307P-201ENST00000391012 103 ntBASIC1.61□□□□□ -2.15
LRFN3Q9BTN0 AC090844.1-201ENST00000422019 156 ntBASIC1.61□□□□□ -2.15
LRFN3Q9BTN0 RNU6-947P-201ENST00000516264 106 ntBASIC1.61□□□□□ -2.15
LRFN3Q9BTN0 AP003327.1-201ENST00000529684 127 ntBASIC1.61□□□□□ -2.15
LRFN3Q9BTN0 MIR548AO-201ENST00000579992 96 ntBASIC1.61□□□□□ -2.15
LRFN3Q9BTN0 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.61□□□□□ -2.15
LRFN3Q9BTN0 AC096720.1-201ENST00000604441 183 ntBASIC1.61□□□□□ -2.15
LRFN3Q9BTN0 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.61□□□□□ -2.15
LRFN3Q9BTN0 AL161722.3-201ENST00000605789 2983 ntBASIC1.6□□□□□ -2.15
LRFN3Q9BTN0 Y_RNA.96-201ENST00000363092 109 ntBASIC1.6□□□□□ -2.15
LRFN3Q9BTN0 MIR517C-201ENST00000385103 95 ntBASIC1.6□□□□□ -2.15
LRFN3Q9BTN0 Y_RNA.705-201ENST00000516862 110 ntBASIC1.6□□□□□ -2.15
LRFN3Q9BTN0 RNU6-1006P-201ENST00000516998 103 ntBASIC1.6□□□□□ -2.15
LRFN3Q9BTN0 MIR376B-201ENST00000614515 100 ntBASIC1.6□□□□□ -2.15
LRFN3Q9BTN0 RNU6-1275P-201ENST00000391087 107 ntBASIC1.59□□□□□ -2.15
LRFN3Q9BTN0 RNU6-887P-201ENST00000410660 100 ntBASIC1.59□□□□□ -2.15
LRFN3Q9BTN0 RNU6-1086P-201ENST00000410930 100 ntBASIC1.59□□□□□ -2.15
LRFN3Q9BTN0 AC109327.2-201ENST00000448339 378 ntBASIC1.59□□□□□ -2.15
LRFN3Q9BTN0 AL133373.1-201ENST00000497098 94 ntBASIC1.59□□□□□ -2.15
LRFN3Q9BTN0 RNU7-41P-201ENST00000515917 61 ntBASIC1.59□□□□□ -2.15
LRFN3Q9BTN0 RNU7-79P-201ENST00000516082 62 ntBASIC1.59□□□□□ -2.15
LRFN3Q9BTN0 SNORA31.24-201ENST00000517232 57 ntBASIC1.59□□□□□ -2.15
LRFN3Q9BTN0 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.59□□□□□ -2.15
LRFN3Q9BTN0 MIR4251-201ENST00000635819 61 ntBASIC1.59□□□□□ -2.15
LRFN3Q9BTN0 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
LRFN3Q9BTN0 MIR34C-201ENST00000384831 77 ntBASIC1.58□□□□□ -2.16
LRFN3Q9BTN0 RNU6-972P-201ENST00000391208 107 ntBASIC1.58□□□□□ -2.16
LRFN3Q9BTN0 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.58□□□□□ -2.16
LRFN3Q9BTN0 SNORD67.1-201ENST00000516618 108 ntBASIC1.58□□□□□ -2.16
LRFN3Q9BTN0 CYP3A52P-201ENST00000563326 91 ntBASIC1.58□□□□□ -2.16
LRFN3Q9BTN0 MIR4439-201ENST00000583746 80 ntBASIC1.58□□□□□ -2.16
LRFN3Q9BTN0 SNORD38.1-201ENST00000363863 68 ntBASIC1.57□□□□□ -2.16
LRFN3Q9BTN0 RNU6-813P-201ENST00000384691 107 ntBASIC1.57□□□□□ -2.16
LRFN3Q9BTN0 MIR1323-201ENST00000408090 73 ntBASIC1.57□□□□□ -2.16
LRFN3Q9BTN0 RNU6-1054P-201ENST00000411293 104 ntBASIC1.57□□□□□ -2.16
LRFN3Q9BTN0 RNU7-137P-201ENST00000516788 62 ntBASIC1.57□□□□□ -2.16
LRFN3Q9BTN0 IGLL4P-201ENST00000614590 133 ntBASIC1.57□□□□□ -2.16
LRFN3Q9BTN0 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.57□□□□□ -2.16
LRFN3Q9BTN0 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
LRFN3Q9BTN0 SNORD114-10-201ENST00000363409 72 ntBASIC1.56□□□□□ -2.16
LRFN3Q9BTN0 RNY1P1-201ENST00000364372 112 ntBASIC1.56□□□□□ -2.16
LRFN3Q9BTN0 RNU6-1163P-201ENST00000364516 107 ntBASIC1.56□□□□□ -2.16
LRFN3Q9BTN0 Y_RNA.448-201ENST00000384185 108 ntBASIC1.56□□□□□ -2.16
LRFN3Q9BTN0 SNORD38B-201ENST00000384690 67 ntBASIC1.56□□□□□ -2.16
LRFN3Q9BTN0 RNU6-1321P-201ENST00000390905 107 ntBASIC1.56□□□□□ -2.16
LRFN3Q9BTN0 U8.15-201ENST00000390947 134 ntBASIC1.56□□□□□ -2.16
LRFN3Q9BTN0 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.56□□□□□ -2.16
LRFN3Q9BTN0 RPS29P28-201ENST00000446439 141 ntBASIC1.56□□□□□ -2.16
LRFN3Q9BTN0 AC022137.1-201ENST00000483735 151 ntBASIC1.56□□□□□ -2.16
LRFN3Q9BTN0 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.56□□□□□ -2.16
LRFN3Q9BTN0 MIR4419B-201ENST00000577260 68 ntBASIC1.56□□□□□ -2.16
LRFN3Q9BTN0 RNU6-86P-201ENST00000606534 107 ntBASIC1.56□□□□□ -2.16
LRFN3Q9BTN0 AC105081.1-201ENST00000617727 106 ntBASIC1.56□□□□□ -2.16
LRFN3Q9BTN0 SNORD38B-202ENST00000625943 69 ntBASIC1.56□□□□□ -2.16
LRFN3Q9BTN0 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
LRFN3Q9BTN0 Y_RNA.219-201ENST00000364232 113 ntBASIC1.55□□□□□ -2.16
LRFN3Q9BTN0 RNU6-865P-201ENST00000364772 107 ntBASIC1.55□□□□□ -2.16
LRFN3Q9BTN0 RNA5SP363-201ENST00000365072 115 ntBASIC1.55□□□□□ -2.16
LRFN3Q9BTN0 SNORD58A-201ENST00000383875 65 ntBASIC1.55□□□□□ -2.16
LRFN3Q9BTN0 RNU6-675P-201ENST00000384236 104 ntBASIC1.55□□□□□ -2.16
LRFN3Q9BTN0 RNU6-1237P-201ENST00000384777 107 ntBASIC1.55□□□□□ -2.16
LRFN3Q9BTN0 RNU6-402P-201ENST00000410678 103 ntBASIC1.55□□□□□ -2.16
LRFN3Q9BTN0 Y_RNA.685-201ENST00000516532 108 ntBASIC1.55□□□□□ -2.16
LRFN3Q9BTN0 RNU6-165P-201ENST00000517170 99 ntBASIC1.55□□□□□ -2.16
LRFN3Q9BTN0 AL096861.1-201ENST00000610899 123 ntBASIC1.55□□□□□ -2.16
LRFN3Q9BTN0 SEPT14P17-201ENST00000617978 177 ntBASIC1.55□□□□□ -2.16
LRFN3Q9BTN0 Y_RNA.73-201ENST00000362910 113 ntBASIC1.54□□□□□ -2.16
LRFN3Q9BTN0 SNORD116-22-201ENST00000384430 92 ntBASIC1.54□□□□□ -2.16
LRFN3Q9BTN0 SNORD78.1-201ENST00000390866 65 ntBASIC1.54□□□□□ -2.16
LRFN3Q9BTN0 AC103810.7-201ENST00000607821 91 ntBASIC1.54□□□□□ -2.16
LRFN3Q9BTN0 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
LRFN3Q9BTN0 SNORD116-10-201ENST00000363791 102 ntBASIC1.53□□□□□ -2.16
LRFN3Q9BTN0 RNY1P13-201ENST00000365030 105 ntBASIC1.53□□□□□ -2.16
LRFN3Q9BTN0 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.53□□□□□ -2.16
LRFN3Q9BTN0 RNU6-638P-201ENST00000516582 104 ntBASIC1.53□□□□□ -2.16
LRFN3Q9BTN0 RNU6-267P-201ENST00000516714 103 ntBASIC1.53□□□□□ -2.16
LRFN3Q9BTN0 RNU11-2P-201ENST00000516898 142 ntBASIC1.53□□□□□ -2.16
LRFN3Q9BTN0 MIR3192-201ENST00000584920 77 ntBASIC1.53□□□□□ -2.16
LRFN3Q9BTN0 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.53□□□□□ -2.16
LRFN3Q9BTN0 MIR6767-201ENST00000637302 66 ntBASIC1.53□□□□□ -2.16
LRFN3Q9BTN0 Y_RNA.115-201ENST00000363272 98 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 238.3 ms