Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 7SK.13-201ENST00000622040 250 ntBASIC1.63□□□□□ -2.15
LRFN3Q9BTN0 MIR1245B-201ENST00000636115 69 ntBASIC1.63□□□□□ -2.15
LRFN3Q9BTN0 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.63□□□□□ -2.15
LRFN3Q9BTN0 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.63□□□□□ -2.15
LRFN3Q9BTN0 RNA5SP457-201ENST00000363657 124 ntBASIC1.62□□□□□ -2.15
LRFN3Q9BTN0 RNA5SP48-201ENST00000363969 126 ntBASIC1.62□□□□□ -2.15
LRFN3Q9BTN0 SNORA16.1-201ENST00000364597 132 ntBASIC1.62□□□□□ -2.15
LRFN3Q9BTN0 Y_RNA.467-201ENST00000384297 102 ntBASIC1.62□□□□□ -2.15
LRFN3Q9BTN0 SUMO2P12-201ENST00000405924 140 ntBASIC1.62□□□□□ -2.15
LRFN3Q9BTN0 RNU6-602P-201ENST00000411155 105 ntBASIC1.62□□□□□ -2.15
LRFN3Q9BTN0 UBL5P1-201ENST00000507979 193 ntBASIC1.62□□□□□ -2.15
LRFN3Q9BTN0 RNU7-2P-201ENST00000516096 62 ntBASIC1.62□□□□□ -2.15
LRFN3Q9BTN0 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.62□□□□□ -2.15
LRFN3Q9BTN0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
LRFN3Q9BTN0 SNORD114-27-201ENST00000363766 70 ntBASIC1.61□□□□□ -2.15
LRFN3Q9BTN0 Y_RNA.190-201ENST00000363964 101 ntBASIC1.61□□□□□ -2.15
LRFN3Q9BTN0 Y_RNA.247-201ENST00000364500 92 ntBASIC1.61□□□□□ -2.15
LRFN3Q9BTN0 MIR206-201ENST00000384872 86 ntBASIC1.61□□□□□ -2.15
LRFN3Q9BTN0 MIR216A-201ENST00000385063 110 ntBASIC1.61□□□□□ -2.15
LRFN3Q9BTN0 RNU6-1307P-201ENST00000391012 103 ntBASIC1.61□□□□□ -2.15
LRFN3Q9BTN0 AC090844.1-201ENST00000422019 156 ntBASIC1.61□□□□□ -2.15
LRFN3Q9BTN0 RNU6-947P-201ENST00000516264 106 ntBASIC1.61□□□□□ -2.15
LRFN3Q9BTN0 AP003327.1-201ENST00000529684 127 ntBASIC1.61□□□□□ -2.15
LRFN3Q9BTN0 MIR548AO-201ENST00000579992 96 ntBASIC1.61□□□□□ -2.15
LRFN3Q9BTN0 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.61□□□□□ -2.15
LRFN3Q9BTN0 AC096720.1-201ENST00000604441 183 ntBASIC1.61□□□□□ -2.15
LRFN3Q9BTN0 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.61□□□□□ -2.15
LRFN3Q9BTN0 AL161722.3-201ENST00000605789 2983 ntBASIC1.6□□□□□ -2.15
LRFN3Q9BTN0 Y_RNA.96-201ENST00000363092 109 ntBASIC1.6□□□□□ -2.15
LRFN3Q9BTN0 MIR517C-201ENST00000385103 95 ntBASIC1.6□□□□□ -2.15
LRFN3Q9BTN0 Y_RNA.705-201ENST00000516862 110 ntBASIC1.6□□□□□ -2.15
LRFN3Q9BTN0 RNU6-1006P-201ENST00000516998 103 ntBASIC1.6□□□□□ -2.15
LRFN3Q9BTN0 MIR376B-201ENST00000614515 100 ntBASIC1.6□□□□□ -2.15
LRFN3Q9BTN0 RNU6-1275P-201ENST00000391087 107 ntBASIC1.59□□□□□ -2.15
LRFN3Q9BTN0 RNU6-887P-201ENST00000410660 100 ntBASIC1.59□□□□□ -2.15
LRFN3Q9BTN0 RNU6-1086P-201ENST00000410930 100 ntBASIC1.59□□□□□ -2.15
LRFN3Q9BTN0 AC109327.2-201ENST00000448339 378 ntBASIC1.59□□□□□ -2.15
LRFN3Q9BTN0 AL133373.1-201ENST00000497098 94 ntBASIC1.59□□□□□ -2.15
LRFN3Q9BTN0 RNU7-41P-201ENST00000515917 61 ntBASIC1.59□□□□□ -2.15
LRFN3Q9BTN0 RNU7-79P-201ENST00000516082 62 ntBASIC1.59□□□□□ -2.15
LRFN3Q9BTN0 SNORA31.24-201ENST00000517232 57 ntBASIC1.59□□□□□ -2.15
LRFN3Q9BTN0 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.59□□□□□ -2.15
LRFN3Q9BTN0 MIR4251-201ENST00000635819 61 ntBASIC1.59□□□□□ -2.15
LRFN3Q9BTN0 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
LRFN3Q9BTN0 MIR34C-201ENST00000384831 77 ntBASIC1.58□□□□□ -2.16
LRFN3Q9BTN0 RNU6-972P-201ENST00000391208 107 ntBASIC1.58□□□□□ -2.16
LRFN3Q9BTN0 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.58□□□□□ -2.16
LRFN3Q9BTN0 SNORD67.1-201ENST00000516618 108 ntBASIC1.58□□□□□ -2.16
LRFN3Q9BTN0 CYP3A52P-201ENST00000563326 91 ntBASIC1.58□□□□□ -2.16
LRFN3Q9BTN0 MIR4439-201ENST00000583746 80 ntBASIC1.58□□□□□ -2.16
LRFN3Q9BTN0 SNORD38.1-201ENST00000363863 68 ntBASIC1.57□□□□□ -2.16
LRFN3Q9BTN0 RNU6-813P-201ENST00000384691 107 ntBASIC1.57□□□□□ -2.16
LRFN3Q9BTN0 MIR1323-201ENST00000408090 73 ntBASIC1.57□□□□□ -2.16
LRFN3Q9BTN0 RNU6-1054P-201ENST00000411293 104 ntBASIC1.57□□□□□ -2.16
LRFN3Q9BTN0 RNU7-137P-201ENST00000516788 62 ntBASIC1.57□□□□□ -2.16
LRFN3Q9BTN0 IGLL4P-201ENST00000614590 133 ntBASIC1.57□□□□□ -2.16
LRFN3Q9BTN0 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.57□□□□□ -2.16
LRFN3Q9BTN0 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
LRFN3Q9BTN0 SNORD114-10-201ENST00000363409 72 ntBASIC1.56□□□□□ -2.16
LRFN3Q9BTN0 RNY1P1-201ENST00000364372 112 ntBASIC1.56□□□□□ -2.16
LRFN3Q9BTN0 RNU6-1163P-201ENST00000364516 107 ntBASIC1.56□□□□□ -2.16
LRFN3Q9BTN0 Y_RNA.448-201ENST00000384185 108 ntBASIC1.56□□□□□ -2.16
LRFN3Q9BTN0 SNORD38B-201ENST00000384690 67 ntBASIC1.56□□□□□ -2.16
LRFN3Q9BTN0 RNU6-1321P-201ENST00000390905 107 ntBASIC1.56□□□□□ -2.16
LRFN3Q9BTN0 U8.15-201ENST00000390947 134 ntBASIC1.56□□□□□ -2.16
LRFN3Q9BTN0 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.56□□□□□ -2.16
LRFN3Q9BTN0 RPS29P28-201ENST00000446439 141 ntBASIC1.56□□□□□ -2.16
LRFN3Q9BTN0 AC022137.1-201ENST00000483735 151 ntBASIC1.56□□□□□ -2.16
LRFN3Q9BTN0 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.56□□□□□ -2.16
LRFN3Q9BTN0 MIR4419B-201ENST00000577260 68 ntBASIC1.56□□□□□ -2.16
LRFN3Q9BTN0 RNU6-86P-201ENST00000606534 107 ntBASIC1.56□□□□□ -2.16
LRFN3Q9BTN0 AC105081.1-201ENST00000617727 106 ntBASIC1.56□□□□□ -2.16
LRFN3Q9BTN0 SNORD38B-202ENST00000625943 69 ntBASIC1.56□□□□□ -2.16
LRFN3Q9BTN0 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
LRFN3Q9BTN0 Y_RNA.219-201ENST00000364232 113 ntBASIC1.55□□□□□ -2.16
LRFN3Q9BTN0 RNU6-865P-201ENST00000364772 107 ntBASIC1.55□□□□□ -2.16
LRFN3Q9BTN0 RNA5SP363-201ENST00000365072 115 ntBASIC1.55□□□□□ -2.16
LRFN3Q9BTN0 SNORD58A-201ENST00000383875 65 ntBASIC1.55□□□□□ -2.16
LRFN3Q9BTN0 RNU6-675P-201ENST00000384236 104 ntBASIC1.55□□□□□ -2.16
LRFN3Q9BTN0 RNU6-1237P-201ENST00000384777 107 ntBASIC1.55□□□□□ -2.16
LRFN3Q9BTN0 RNU6-402P-201ENST00000410678 103 ntBASIC1.55□□□□□ -2.16
LRFN3Q9BTN0 Y_RNA.685-201ENST00000516532 108 ntBASIC1.55□□□□□ -2.16
LRFN3Q9BTN0 RNU6-165P-201ENST00000517170 99 ntBASIC1.55□□□□□ -2.16
LRFN3Q9BTN0 AL096861.1-201ENST00000610899 123 ntBASIC1.55□□□□□ -2.16
LRFN3Q9BTN0 SEPT14P17-201ENST00000617978 177 ntBASIC1.55□□□□□ -2.16
LRFN3Q9BTN0 Y_RNA.73-201ENST00000362910 113 ntBASIC1.54□□□□□ -2.16
LRFN3Q9BTN0 SNORD116-22-201ENST00000384430 92 ntBASIC1.54□□□□□ -2.16
LRFN3Q9BTN0 SNORD78.1-201ENST00000390866 65 ntBASIC1.54□□□□□ -2.16
LRFN3Q9BTN0 AC103810.7-201ENST00000607821 91 ntBASIC1.54□□□□□ -2.16
LRFN3Q9BTN0 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
LRFN3Q9BTN0 SNORD116-10-201ENST00000363791 102 ntBASIC1.53□□□□□ -2.16
LRFN3Q9BTN0 RNY1P13-201ENST00000365030 105 ntBASIC1.53□□□□□ -2.16
LRFN3Q9BTN0 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.53□□□□□ -2.16
LRFN3Q9BTN0 RNU6-638P-201ENST00000516582 104 ntBASIC1.53□□□□□ -2.16
LRFN3Q9BTN0 RNU6-267P-201ENST00000516714 103 ntBASIC1.53□□□□□ -2.16
LRFN3Q9BTN0 RNU11-2P-201ENST00000516898 142 ntBASIC1.53□□□□□ -2.16
LRFN3Q9BTN0 MIR3192-201ENST00000584920 77 ntBASIC1.53□□□□□ -2.16
LRFN3Q9BTN0 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.53□□□□□ -2.16
LRFN3Q9BTN0 MIR6767-201ENST00000637302 66 ntBASIC1.53□□□□□ -2.16
LRFN3Q9BTN0 Y_RNA.115-201ENST00000363272 98 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms