Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 SNORD81.2-201ENST00000365153 76 ntBASIC-1.24□□□□□ -2.61
LYSMD1Q96S90 RNU6-10P-201ENST00000384036 107 ntBASIC-1.24□□□□□ -2.61
LYSMD1Q96S90 Y_RNA.485-201ENST00000384395 102 ntBASIC-1.24□□□□□ -2.61
LYSMD1Q96S90 RNU6-476P-201ENST00000384726 107 ntBASIC-1.24□□□□□ -2.61
LYSMD1Q96S90 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.24□□□□□ -2.61
LYSMD1Q96S90 Y_RNA.661-201ENST00000516003 99 ntBASIC-1.24□□□□□ -2.61
LYSMD1Q96S90 RNU6-561P-201ENST00000516222 102 ntBASIC-1.24□□□□□ -2.61
LYSMD1Q96S90 SNORA20.3-201ENST00000516880 132 ntBASIC-1.24□□□□□ -2.61
LYSMD1Q96S90 RNY1P9-201ENST00000532431 109 ntBASIC-1.24□□□□□ -2.61
LYSMD1Q96S90 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.24□□□□□ -2.61
LYSMD1Q96S90 AL138825.1-201ENST00000618587 192 ntBASIC-1.24□□□□□ -2.61
LYSMD1Q96S90 MIR3688-2-201ENST00000636963 87 ntBASIC-1.24□□□□□ -2.61
LYSMD1Q96S90 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.25□□□□□ -2.61
LYSMD1Q96S90 Y_RNA.142-201ENST00000363491 102 ntBASIC-1.25□□□□□ -2.61
LYSMD1Q96S90 Y_RNA.217-201ENST00000364214 105 ntBASIC-1.25□□□□□ -2.61
LYSMD1Q96S90 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.25□□□□□ -2.61
LYSMD1Q96S90 Y_RNA.303-201ENST00000364998 94 ntBASIC-1.25□□□□□ -2.61
LYSMD1Q96S90 RNU6-905P-201ENST00000384434 107 ntBASIC-1.25□□□□□ -2.61
LYSMD1Q96S90 Y_RNA.641-201ENST00000459414 105 ntBASIC-1.25□□□□□ -2.61
LYSMD1Q96S90 AC097510.1-201ENST00000510945 133 ntBASIC-1.25□□□□□ -2.61
LYSMD1Q96S90 RNU6-559P-201ENST00000516151 98 ntBASIC-1.25□□□□□ -2.61
LYSMD1Q96S90 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.25□□□□□ -2.61
LYSMD1Q96S90 RNU6-762P-201ENST00000517107 102 ntBASIC-1.25□□□□□ -2.61
LYSMD1Q96S90 AC009779.6-201ENST00000603972 165 ntBASIC-1.25□□□□□ -2.61
LYSMD1Q96S90 AC037487.3-201ENST00000606668 112 ntBASIC-1.25□□□□□ -2.61
LYSMD1Q96S90 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-1.26□□□□□ -2.61
LYSMD1Q96S90 snoU2_19.4-201ENST00000364329 80 ntBASIC-1.26□□□□□ -2.61
LYSMD1Q96S90 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.26□□□□□ -2.61
LYSMD1Q96S90 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.26□□□□□ -2.61
LYSMD1Q96S90 RNU6-431P-201ENST00000383874 107 ntBASIC-1.26□□□□□ -2.61
LYSMD1Q96S90 RNU6-1040P-201ENST00000383974 107 ntBASIC-1.26□□□□□ -2.61
LYSMD1Q96S90 RNU6-211P-201ENST00000384047 107 ntBASIC-1.26□□□□□ -2.61
LYSMD1Q96S90 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.26□□□□□ -2.61
LYSMD1Q96S90 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.26□□□□□ -2.61
LYSMD1Q96S90 AL161932.1-201ENST00000437408 146 ntBASIC-1.26□□□□□ -2.61
LYSMD1Q96S90 SNORD18.2-201ENST00000459604 70 ntBASIC-1.26□□□□□ -2.61
LYSMD1Q96S90 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.26□□□□□ -2.61
LYSMD1Q96S90 RNU2-35P-201ENST00000516446 142 ntBASIC-1.26□□□□□ -2.61
LYSMD1Q96S90 SNORA40.14-201ENST00000516543 86 ntBASIC-1.26□□□□□ -2.61
LYSMD1Q96S90 RNU6-850P-201ENST00000516934 103 ntBASIC-1.26□□□□□ -2.61
LYSMD1Q96S90 AC104985.2-201ENST00000620598 500 ntBASIC-1.26□□□□□ -2.61
LYSMD1Q96S90 TRDV1-202ENST00000621643 102 ntBASIC-1.26□□□□□ -2.61
LYSMD1Q96S90 snoR1.1-201ENST00000628177 80 ntBASIC-1.26□□□□□ -2.61
LYSMD1Q96S90 U6.100-201ENST00000636230 99 ntBASIC-1.26□□□□□ -2.61
LYSMD1Q96S90 AC112487.2-201ENST00000637950 304 ntBASIC-1.26□□□□□ -2.61
LYSMD1Q96S90 RNU6-690P-201ENST00000365242 106 ntBASIC-1.27□□□□□ -2.61
LYSMD1Q96S90 Y_RNA.496-201ENST00000384444 101 ntBASIC-1.27□□□□□ -2.61
LYSMD1Q96S90 RNU2-4P-201ENST00000606190 192 ntBASIC-1.27□□□□□ -2.61
LYSMD1Q96S90 SNORD58B-201ENST00000607313 66 ntBASIC-1.27□□□□□ -2.61
LYSMD1Q96S90 MIR376B-201ENST00000614515 100 ntBASIC-1.27□□□□□ -2.61
LYSMD1Q96S90 AC022079.1-201ENST00000621546 602 ntBASIC-1.27□□□□□ -2.61
LYSMD1Q96S90 AL606534.2-204ENST00000635008 178 ntBASIC-1.27□□□□□ -2.61
LYSMD1Q96S90 Y_RNA.259-201ENST00000364619 101 ntBASIC-1.28□□□□□ -2.61
LYSMD1Q96S90 SNORD74.6-201ENST00000364796 70 ntBASIC-1.28□□□□□ -2.61
LYSMD1Q96S90 RNU6-290P-201ENST00000365212 101 ntBASIC-1.28□□□□□ -2.61
LYSMD1Q96S90 MIR582-201ENST00000365731 98 ntBASIC-1.28□□□□□ -2.61
LYSMD1Q96S90 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.28□□□□□ -2.61
LYSMD1Q96S90 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.28□□□□□ -2.61
LYSMD1Q96S90 MIR616-201ENST00000385293 97 ntBASIC-1.28□□□□□ -2.61
LYSMD1Q96S90 SNORD57-201ENST00000448188 72 ntBASIC-1.28□□□□□ -2.61
LYSMD1Q96S90 MTND4LP30-201ENST00000454092 297 ntBASIC-1.28□□□□□ -2.61
LYSMD1Q96S90 SCARNA18B-201ENST00000458806 135 ntBASIC-1.28□□□□□ -2.61
LYSMD1Q96S90 RNU7-2P-201ENST00000516096 62 ntBASIC-1.28□□□□□ -2.61
LYSMD1Q96S90 SNORD116-25-201ENST00000516517 92 ntBASIC-1.28□□□□□ -2.61
LYSMD1Q96S90 snoU83B.1-201ENST00000517136 88 ntBASIC-1.28□□□□□ -2.61
LYSMD1Q96S90 MIR378F-201ENST00000578143 78 ntBASIC-1.28□□□□□ -2.61
LYSMD1Q96S90 MTND4LP32-201ENST00000636111 270 ntBASIC-1.28□□□□□ -2.61
LYSMD1Q96S90 MIR409-201ENST00000362237 79 ntBASIC-1.29□□□□□ -2.62
LYSMD1Q96S90 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.29□□□□□ -2.62
LYSMD1Q96S90 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.29□□□□□ -2.62
LYSMD1Q96S90 RNU6-728P-201ENST00000365375 104 ntBASIC-1.29□□□□□ -2.62
LYSMD1Q96S90 RNU6-24P-201ENST00000384440 107 ntBASIC-1.29□□□□□ -2.62
LYSMD1Q96S90 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.29□□□□□ -2.62
LYSMD1Q96S90 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.29□□□□□ -2.62
LYSMD1Q96S90 RNU4-69P-201ENST00000410677 143 ntBASIC-1.29□□□□□ -2.62
LYSMD1Q96S90 SNORD2-201ENST00000459163 69 ntBASIC-1.29□□□□□ -2.62
LYSMD1Q96S90 MIR382-201ENST00000637119 76 ntBASIC-1.29□□□□□ -2.62
LYSMD1Q96S90 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.3□□□□□ -2.62
LYSMD1Q96S90 Y_RNA.445-201ENST00000384168 102 ntBASIC-1.3□□□□□ -2.62
LYSMD1Q96S90 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.3□□□□□ -2.62
LYSMD1Q96S90 MIR624-201ENST00000385217 97 ntBASIC-1.3□□□□□ -2.62
LYSMD1Q96S90 SNORD77B-201ENST00000391112 67 ntBASIC-1.3□□□□□ -2.62
LYSMD1Q96S90 MIR548E-201ENST00000408287 88 ntBASIC-1.3□□□□□ -2.62
LYSMD1Q96S90 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-1.3□□□□□ -2.62
LYSMD1Q96S90 SERF1AP1-201ENST00000514575 187 ntBASIC-1.3□□□□□ -2.62
LYSMD1Q96S90 AC087741.2-201ENST00000619415 172 ntBASIC-1.3□□□□□ -2.62
LYSMD1Q96S90 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.3□□□□□ -2.62
LYSMD1Q96S90 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.31□□□□□ -2.62
LYSMD1Q96S90 MIR147A-201ENST00000385079 72 ntBASIC-1.31□□□□□ -2.62
LYSMD1Q96S90 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.31□□□□□ -2.62
LYSMD1Q96S90 RNA5SP470-201ENST00000516463 106 ntBASIC-1.31□□□□□ -2.62
LYSMD1Q96S90 RNU6-845P-201ENST00000362578 103 ntBASIC-1.32□□□□□ -2.62
LYSMD1Q96S90 RNU4-32P-201ENST00000363404 141 ntBASIC-1.32□□□□□ -2.62
LYSMD1Q96S90 Y_RNA.154-201ENST00000363624 102 ntBASIC-1.32□□□□□ -2.62
LYSMD1Q96S90 SNORD27-201ENST00000363981 72 ntBASIC-1.32□□□□□ -2.62
LYSMD1Q96S90 RNU6-978P-201ENST00000364371 103 ntBASIC-1.32□□□□□ -2.62
LYSMD1Q96S90 RNU6-472P-201ENST00000384299 107 ntBASIC-1.32□□□□□ -2.62
LYSMD1Q96S90 SNORD115-46-201ENST00000390982 71 ntBASIC-1.32□□□□□ -2.62
LYSMD1Q96S90 Y_RNA.581-201ENST00000391017 97 ntBASIC-1.32□□□□□ -2.62
LYSMD1Q96S90 AL353813.1-201ENST00000440700 253 ntBASIC-1.32□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms