Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AL662814.1-201ENST00000617364 121 ntBASIC2.13□□□□□ -2.07
SYNGAP1Q96PV0 MIR8063-201ENST00000621930 81 ntBASIC2.13□□□□□ -2.07
SYNGAP1Q96PV0 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SYNGAP1Q96PV0 RNU6-1244P-201ENST00000363614 108 ntBASIC2.12□□□□□ -2.07
SYNGAP1Q96PV0 MIR181B2-201ENST00000385004 89 ntBASIC2.12□□□□□ -2.07
SYNGAP1Q96PV0 SNORD41-201ENST00000386967 70 ntBASIC2.12□□□□□ -2.07
SYNGAP1Q96PV0 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
SYNGAP1Q96PV0 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.12□□□□□ -2.07
SYNGAP1Q96PV0 SNORA25.15-201ENST00000516487 89 ntBASIC2.12□□□□□ -2.07
SYNGAP1Q96PV0 MIR514B-201ENST00000516774 80 ntBASIC2.12□□□□□ -2.07
SYNGAP1Q96PV0 MIR4255-201ENST00000579351 72 ntBASIC2.12□□□□□ -2.07
SYNGAP1Q96PV0 MIR4500-201ENST00000579472 76 ntBASIC2.12□□□□□ -2.07
SYNGAP1Q96PV0 AL357312.1-201ENST00000603879 298 ntBASIC2.12□□□□□ -2.07
SYNGAP1Q96PV0 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
SYNGAP1Q96PV0 RNU6-396P-201ENST00000365369 105 ntBASIC2.11□□□□□ -2.07
SYNGAP1Q96PV0 Y_RNA.426-201ENST00000384068 113 ntBASIC2.11□□□□□ -2.07
SYNGAP1Q96PV0 MIR17-201ENST00000385012 84 ntBASIC2.11□□□□□ -2.07
SYNGAP1Q96PV0 RNU6-205P-201ENST00000390858 107 ntBASIC2.11□□□□□ -2.07
SYNGAP1Q96PV0 AC244023.1-201ENST00000426884 112 ntBASIC2.11□□□□□ -2.07
SYNGAP1Q96PV0 RPS29P11-201ENST00000496507 171 ntBASIC2.11□□□□□ -2.07
SYNGAP1Q96PV0 RNA5SP395-201ENST00000516567 118 ntBASIC2.11□□□□□ -2.07
SYNGAP1Q96PV0 RNA5SP364-201ENST00000516938 78 ntBASIC2.11□□□□□ -2.07
SYNGAP1Q96PV0 AP000753.3-201ENST00000604083 169 ntBASIC2.11□□□□□ -2.07
SYNGAP1Q96PV0 AC242498.1-201ENST00000604134 111 ntBASIC2.11□□□□□ -2.07
SYNGAP1Q96PV0 AC084768.2-201ENST00000622736 221 ntBASIC2.11□□□□□ -2.07
SYNGAP1Q96PV0 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.11□□□□□ -2.07
SYNGAP1Q96PV0 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SYNGAP1Q96PV0 RNU6-1125P-201ENST00000363601 107 ntBASIC2.1□□□□□ -2.07
SYNGAP1Q96PV0 RNU6-979P-201ENST00000383896 107 ntBASIC2.1□□□□□ -2.07
SYNGAP1Q96PV0 RNU6-480P-201ENST00000384332 107 ntBASIC2.1□□□□□ -2.07
SYNGAP1Q96PV0 MIR4303-201ENST00000581299 66 ntBASIC2.1□□□□□ -2.07
SYNGAP1Q96PV0 MIR4448-201ENST00000584360 86 ntBASIC2.1□□□□□ -2.07
SYNGAP1Q96PV0 AL096861.1-201ENST00000610899 123 ntBASIC2.1□□□□□ -2.07
SYNGAP1Q96PV0 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SYNGAP1Q96PV0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SYNGAP1Q96PV0 Y_RNA.168-201ENST00000363740 102 ntBASIC2.09□□□□□ -2.08
SYNGAP1Q96PV0 Y_RNA.313-201ENST00000365095 103 ntBASIC2.09□□□□□ -2.08
SYNGAP1Q96PV0 AL161935.2-201ENST00000414627 60 ntBASIC2.09□□□□□ -2.08
SYNGAP1Q96PV0 RNU6-250P-201ENST00000516958 103 ntBASIC2.09□□□□□ -2.08
SYNGAP1Q96PV0 AC090897.1-201ENST00000580909 226 ntBASIC2.09□□□□□ -2.08
SYNGAP1Q96PV0 GHRLOS.1-201ENST00000610995 70 ntBASIC2.09□□□□□ -2.08
SYNGAP1Q96PV0 AL773524.1-201ENST00000614065 229 ntBASIC2.09□□□□□ -2.08
SYNGAP1Q96PV0 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC2.09□□□□□ -2.08
SYNGAP1Q96PV0 SNORA16B-201ENST00000364674 135 ntBASIC2.08□□□□□ -2.08
SYNGAP1Q96PV0 RNU6-949P-201ENST00000384040 107 ntBASIC2.08□□□□□ -2.08
SYNGAP1Q96PV0 AC244636.1-201ENST00000421152 228 ntBASIC2.08□□□□□ -2.08
SYNGAP1Q96PV0 HSPE1P24-201ENST00000450782 238 ntBASIC2.08□□□□□ -2.08
SYNGAP1Q96PV0 snoU13.2-201ENST00000459201 104 ntBASIC2.08□□□□□ -2.08
SYNGAP1Q96PV0 AL513043.2-201ENST00000573941 143 ntBASIC2.08□□□□□ -2.08
SYNGAP1Q96PV0 AC025521.1-201ENST00000621624 286 ntBASIC2.08□□□□□ -2.08
SYNGAP1Q96PV0 MIR548BB-201ENST00000626714 66 ntBASIC2.08□□□□□ -2.08
SYNGAP1Q96PV0 U6.109-201ENST00000636749 87 ntBASIC2.08□□□□□ -2.08
SYNGAP1Q96PV0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.07□□□□□ -2.08
SYNGAP1Q96PV0 SUMO2P12-201ENST00000405924 140 ntBASIC2.07□□□□□ -2.08
SYNGAP1Q96PV0 HAR1A.1-201ENST00000459583 118 ntBASIC2.07□□□□□ -2.08
SYNGAP1Q96PV0 MIR8074-201ENST00000615081 81 ntBASIC2.07□□□□□ -2.08
SYNGAP1Q96PV0 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.07□□□□□ -2.08
SYNGAP1Q96PV0 RNU6-509P-201ENST00000363519 107 ntBASIC2.06□□□□□ -2.08
SYNGAP1Q96PV0 Y_RNA.173-201ENST00000363776 113 ntBASIC2.06□□□□□ -2.08
SYNGAP1Q96PV0 RNU6-652P-201ENST00000365488 107 ntBASIC2.06□□□□□ -2.08
SYNGAP1Q96PV0 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.06□□□□□ -2.08
SYNGAP1Q96PV0 RNA5SP233-201ENST00000459153 113 ntBASIC2.06□□□□□ -2.08
SYNGAP1Q96PV0 AC023790.1-201ENST00000482174 347 ntBASIC2.06□□□□□ -2.08
SYNGAP1Q96PV0 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
SYNGAP1Q96PV0 SNORA2B-201ENST00000384583 137 ntBASIC2.05□□□□□ -2.08
SYNGAP1Q96PV0 RNU6-519P-201ENST00000410590 108 ntBASIC2.05□□□□□ -2.08
SYNGAP1Q96PV0 RNU7-62P-201ENST00000458856 62 ntBASIC2.05□□□□□ -2.08
SYNGAP1Q96PV0 RNU7-171P-201ENST00000459581 62 ntBASIC2.05□□□□□ -2.08
SYNGAP1Q96PV0 AC019176.1-201ENST00000518519 225 ntBASIC2.05□□□□□ -2.08
SYNGAP1Q96PV0 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.05□□□□□ -2.08
SYNGAP1Q96PV0 MIR6740-201ENST00000618268 113 ntBASIC2.05□□□□□ -2.08
SYNGAP1Q96PV0 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SYNGAP1Q96PV0 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
SYNGAP1Q96PV0 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
SYNGAP1Q96PV0 RNA5SP133-201ENST00000363368 119 ntBASIC2.04□□□□□ -2.08
SYNGAP1Q96PV0 RNY1P2-201ENST00000364820 117 ntBASIC2.04□□□□□ -2.08
SYNGAP1Q96PV0 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.04□□□□□ -2.08
SYNGAP1Q96PV0 RN7SL274P-201ENST00000492268 272 ntBASIC2.04□□□□□ -2.08
SYNGAP1Q96PV0 AC020891.4-201ENST00000605745 93 ntBASIC2.04□□□□□ -2.08
SYNGAP1Q96PV0 uc_338.20-201ENST00000621563 178 ntBASIC2.04□□□□□ -2.08
SYNGAP1Q96PV0 AC006160.2-201ENST00000637708 154 ntBASIC2.04□□□□□ -2.08
SYNGAP1Q96PV0 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SYNGAP1Q96PV0 RNU6-633P-201ENST00000362612 103 ntBASIC2.03□□□□□ -2.08
SYNGAP1Q96PV0 Y_RNA.57-201ENST00000362806 113 ntBASIC2.03□□□□□ -2.08
SYNGAP1Q96PV0 Y_RNA.244-201ENST00000364484 109 ntBASIC2.03□□□□□ -2.08
SYNGAP1Q96PV0 RNU6-787P-201ENST00000384032 107 ntBASIC2.03□□□□□ -2.08
SYNGAP1Q96PV0 RNU6-1165P-201ENST00000410119 107 ntBASIC2.03□□□□□ -2.08
SYNGAP1Q96PV0 BX276092.1-201ENST00000427368 251 ntBASIC2.03□□□□□ -2.08
SYNGAP1Q96PV0 MIR2115-201ENST00000516657 100 ntBASIC2.03□□□□□ -2.08
SYNGAP1Q96PV0 AC015688.6-201ENST00000577737 104 ntBASIC2.03□□□□□ -2.08
SYNGAP1Q96PV0 MIR8066-201ENST00000617280 78 ntBASIC2.03□□□□□ -2.08
SYNGAP1Q96PV0 AL359851.1-201ENST00000569460 4997 ntBASIC2.03□□□□□ -2.08
SYNGAP1Q96PV0 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.02□□□□□ -2.09
SYNGAP1Q96PV0 MIR103A2-201ENST00000362154 78 ntBASIC2.02□□□□□ -2.09
SYNGAP1Q96PV0 Y_RNA.119-201ENST00000363301 96 ntBASIC2.02□□□□□ -2.09
SYNGAP1Q96PV0 RNA5SP489-201ENST00000410986 109 ntBASIC2.02□□□□□ -2.09
SYNGAP1Q96PV0 AL356379.1-201ENST00000414105 126 ntBASIC2.02□□□□□ -2.09
SYNGAP1Q96PV0 RNU6-1223P-201ENST00000517124 104 ntBASIC2.02□□□□□ -2.09
SYNGAP1Q96PV0 AC138749.4-201ENST00000563970 127 ntBASIC2.02□□□□□ -2.09
SYNGAP1Q96PV0 SNORA77B-201ENST00000578179 125 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms