Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.19□□□□□ -2.6
TOPBP1Q92547 MTND4LP30-201ENST00000454092 297 ntBASIC-1.19□□□□□ -2.6
TOPBP1Q92547 RNU6-559P-201ENST00000516151 98 ntBASIC-1.19□□□□□ -2.6
TOPBP1Q92547 SNORD58B-201ENST00000607313 66 ntBASIC-1.19□□□□□ -2.6
TOPBP1Q92547 PART1_1.1-201ENST00000611761 217 ntBASIC-1.19□□□□□ -2.6
TOPBP1Q92547 AC093783.1-201ENST00000612976 329 ntBASIC-1.19□□□□□ -2.6
TOPBP1Q92547 MT-TY-201ENST00000387409 66 ntBASIC-1.2□□□□□ -2.6
TOPBP1Q92547 SNORD115-46-201ENST00000390982 71 ntBASIC-1.2□□□□□ -2.6
TOPBP1Q92547 RNU6-721P-201ENST00000410155 105 ntBASIC-1.2□□□□□ -2.6
TOPBP1Q92547 AC244090.1-201ENST00000441884 93 ntBASIC-1.2□□□□□ -2.6
TOPBP1Q92547 RNU7-48P-201ENST00000458875 63 ntBASIC-1.2□□□□□ -2.6
TOPBP1Q92547 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.2□□□□□ -2.6
TOPBP1Q92547 RNU6-158P-201ENST00000517104 100 ntBASIC-1.2□□□□□ -2.6
TOPBP1Q92547 AC113139.1-201ENST00000605049 239 ntBASIC-1.2□□□□□ -2.6
TOPBP1Q92547 MIR376A1-201ENST00000616574 68 ntBASIC-1.2□□□□□ -2.6
TOPBP1Q92547 MTND5P18-201ENST00000445624 1801 ntBASIC-1.2□□□□□ -2.6
TOPBP1Q92547 SNORD114-25-201ENST00000363742 72 ntBASIC-1.2□□□□□ -2.6
TOPBP1Q92547 Y_RNA.217-201ENST00000364214 105 ntBASIC-1.2□□□□□ -2.6
TOPBP1Q92547 Y_RNA.641-201ENST00000459414 105 ntBASIC-1.2□□□□□ -2.6
TOPBP1Q92547 MIR3179-1-201ENST00000578940 84 ntBASIC-1.2□□□□□ -2.6
TOPBP1Q92547 MIR3179-2-201ENST00000579107 84 ntBASIC-1.2□□□□□ -2.6
TOPBP1Q92547 MIR3179-3-201ENST00000579566 84 ntBASIC-1.2□□□□□ -2.6
TOPBP1Q92547 MIR3179-4-201ENST00000617599 84 ntBASIC-1.2□□□□□ -2.6
TOPBP1Q92547 RNU4-36P-201ENST00000364294 144 ntBASIC-1.21□□□□□ -2.6
TOPBP1Q92547 SNORD115-44-201ENST00000365391 82 ntBASIC-1.21□□□□□ -2.6
TOPBP1Q92547 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.21□□□□□ -2.6
TOPBP1Q92547 Y_RNA.496-201ENST00000384444 101 ntBASIC-1.21□□□□□ -2.6
TOPBP1Q92547 MIR1277-201ENST00000408536 78 ntBASIC-1.21□□□□□ -2.6
TOPBP1Q92547 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.21□□□□□ -2.6
TOPBP1Q92547 RNU6-287P-201ENST00000516230 98 ntBASIC-1.21□□□□□ -2.6
TOPBP1Q92547 RNU6-570P-201ENST00000517051 105 ntBASIC-1.21□□□□□ -2.6
TOPBP1Q92547 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.21□□□□□ -2.6
TOPBP1Q92547 MIR548AE2-201ENST00000583456 67 ntBASIC-1.21□□□□□ -2.6
TOPBP1Q92547 AC104985.2-201ENST00000620598 500 ntBASIC-1.21□□□□□ -2.6
TOPBP1Q92547 RNU7-55P-201ENST00000459426 62 ntBASIC-1.22□□□□□ -2.6
TOPBP1Q92547 AC082651.2-201ENST00000496833 166 ntBASIC-1.22□□□□□ -2.6
TOPBP1Q92547 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-1.22□□□□□ -2.6
TOPBP1Q92547 RNU6-170P-201ENST00000362832 104 ntBASIC-1.23□□□□□ -2.61
TOPBP1Q92547 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.23□□□□□ -2.61
TOPBP1Q92547 RNU6-326P-201ENST00000365480 107 ntBASIC-1.23□□□□□ -2.61
TOPBP1Q92547 RNU6-211P-201ENST00000384047 107 ntBASIC-1.23□□□□□ -2.61
TOPBP1Q92547 Y_RNA.445-201ENST00000384168 102 ntBASIC-1.23□□□□□ -2.61
TOPBP1Q92547 MIR652-201ENST00000385278 98 ntBASIC-1.23□□□□□ -2.61
TOPBP1Q92547 MIR2113-201ENST00000459007 91 ntBASIC-1.23□□□□□ -2.61
TOPBP1Q92547 RNU6-718P-201ENST00000516166 105 ntBASIC-1.23□□□□□ -2.61
TOPBP1Q92547 RNU6-1149P-201ENST00000516810 97 ntBASIC-1.23□□□□□ -2.61
TOPBP1Q92547 MTND4LP32-201ENST00000636111 270 ntBASIC-1.23□□□□□ -2.61
TOPBP1Q92547 Y_RNA.176-201ENST00000363815 109 ntBASIC-1.24□□□□□ -2.61
TOPBP1Q92547 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.24□□□□□ -2.61
TOPBP1Q92547 SNORD81.2-201ENST00000365153 76 ntBASIC-1.24□□□□□ -2.61
TOPBP1Q92547 RNU6-728P-201ENST00000365375 104 ntBASIC-1.24□□□□□ -2.61
TOPBP1Q92547 AC069439.1-201ENST00000494739 167 ntBASIC-1.24□□□□□ -2.61
TOPBP1Q92547 Y_RNA.661-201ENST00000516003 99 ntBASIC-1.24□□□□□ -2.61
TOPBP1Q92547 RNU6-561P-201ENST00000516222 102 ntBASIC-1.24□□□□□ -2.61
TOPBP1Q92547 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-1.24□□□□□ -2.61
TOPBP1Q92547 AC022079.1-201ENST00000621546 602 ntBASIC-1.24□□□□□ -2.61
TOPBP1Q92547 RNU6-502P-201ENST00000362419 108 ntBASIC-1.25□□□□□ -2.61
TOPBP1Q92547 MIR616-201ENST00000385293 97 ntBASIC-1.25□□□□□ -2.61
TOPBP1Q92547 snoU13.13-201ENST00000458842 104 ntBASIC-1.25□□□□□ -2.61
TOPBP1Q92547 SNORD116-25-201ENST00000516517 92 ntBASIC-1.25□□□□□ -2.61
TOPBP1Q92547 AC037487.3-201ENST00000606668 112 ntBASIC-1.25□□□□□ -2.61
TOPBP1Q92547 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-1.25□□□□□ -2.61
TOPBP1Q92547 SNORA25.1-201ENST00000362326 128 ntBASIC-1.25□□□□□ -2.61
TOPBP1Q92547 Y_RNA.166-201ENST00000363730 102 ntBASIC-1.25□□□□□ -2.61
TOPBP1Q92547 Y_RNA.187-201ENST00000363918 113 ntBASIC-1.25□□□□□ -2.61
TOPBP1Q92547 snoU2_19.4-201ENST00000364329 80 ntBASIC-1.25□□□□□ -2.61
TOPBP1Q92547 Y_RNA.259-201ENST00000364619 101 ntBASIC-1.25□□□□□ -2.61
TOPBP1Q92547 AC009779.6-201ENST00000603972 165 ntBASIC-1.25□□□□□ -2.61
TOPBP1Q92547 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.26□□□□□ -2.61
TOPBP1Q92547 Y_RNA.183-201ENST00000363882 113 ntBASIC-1.26□□□□□ -2.61
TOPBP1Q92547 RNU1-115P-201ENST00000365329 160 ntBASIC-1.26□□□□□ -2.61
TOPBP1Q92547 Y_RNA.474-201ENST00000384341 102 ntBASIC-1.26□□□□□ -2.61
TOPBP1Q92547 MIR206-201ENST00000384872 86 ntBASIC-1.26□□□□□ -2.61
TOPBP1Q92547 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.26□□□□□ -2.61
TOPBP1Q92547 SNORD22.1-201ENST00000516331 125 ntBASIC-1.26□□□□□ -2.61
TOPBP1Q92547 Y_RNA.718-201ENST00000517110 102 ntBASIC-1.26□□□□□ -2.61
TOPBP1Q92547 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.26□□□□□ -2.61
TOPBP1Q92547 AC084781.2-201ENST00000615568 161 ntBASIC-1.26□□□□□ -2.61
TOPBP1Q92547 AP001362.1-201ENST00000625165 124 ntBASIC-1.26□□□□□ -2.61
TOPBP1Q92547 SNORD74.6-201ENST00000364796 70 ntBASIC-1.27□□□□□ -2.61
TOPBP1Q92547 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.27□□□□□ -2.61
TOPBP1Q92547 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.27□□□□□ -2.61
TOPBP1Q92547 MIR624-201ENST00000385217 97 ntBASIC-1.27□□□□□ -2.61
TOPBP1Q92547 MIR548F1-201ENST00000408667 84 ntBASIC-1.27□□□□□ -2.61
TOPBP1Q92547 RNA5SP180-201ENST00000516181 101 ntBASIC-1.27□□□□□ -2.61
TOPBP1Q92547 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.28□□□□□ -2.61
TOPBP1Q92547 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.28□□□□□ -2.61
TOPBP1Q92547 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.28□□□□□ -2.61
TOPBP1Q92547 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.28□□□□□ -2.61
TOPBP1Q92547 Y_RNA.387-201ENST00000383918 102 ntBASIC-1.28□□□□□ -2.61
TOPBP1Q92547 MIR516A2-201ENST00000384888 90 ntBASIC-1.28□□□□□ -2.61
TOPBP1Q92547 MIR516A1-201ENST00000385033 90 ntBASIC-1.28□□□□□ -2.61
TOPBP1Q92547 Y_RNA.581-201ENST00000391017 97 ntBASIC-1.28□□□□□ -2.61
TOPBP1Q92547 SNORD2-201ENST00000459163 69 ntBASIC-1.28□□□□□ -2.61
TOPBP1Q92547 MIR1270-201ENST00000459320 83 ntBASIC-1.28□□□□□ -2.61
TOPBP1Q92547 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.28□□□□□ -2.61
TOPBP1Q92547 UBE2WP1-201ENST00000362030 340 ntBASIC-1.29□□□□□ -2.62
TOPBP1Q92547 Y_RNA.3-201ENST00000362331 103 ntBASIC-1.29□□□□□ -2.62
TOPBP1Q92547 SNORD115-25-201ENST00000362619 82 ntBASIC-1.29□□□□□ -2.62
TOPBP1Q92547 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.29□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 176.8 ms