Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 RNU6-791P-201ENST00000410467 104 ntBASIC1.87□□□□□ -2.11
SH3RF3Q8TEJ3 RNU6-705P-201ENST00000410601 104 ntBASIC1.87□□□□□ -2.11
SH3RF3Q8TEJ3 RNU6-1100P-201ENST00000410691 104 ntBASIC1.87□□□□□ -2.11
SH3RF3Q8TEJ3 RNU6-860P-201ENST00000410860 104 ntBASIC1.87□□□□□ -2.11
SH3RF3Q8TEJ3 RNU6-1217P-201ENST00000411276 104 ntBASIC1.87□□□□□ -2.11
SH3RF3Q8TEJ3 RNU6-785P-201ENST00000411324 104 ntBASIC1.87□□□□□ -2.11
SH3RF3Q8TEJ3 SNORD53B-201ENST00000577887 78 ntBASIC1.87□□□□□ -2.11
SH3RF3Q8TEJ3 MIR548AO-201ENST00000579992 96 ntBASIC1.87□□□□□ -2.11
SH3RF3Q8TEJ3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.87□□□□□ -2.11
SH3RF3Q8TEJ3 U6.90-201ENST00000614007 104 ntBASIC1.87□□□□□ -2.11
SH3RF3Q8TEJ3 U6.70-201ENST00000620287 104 ntBASIC1.87□□□□□ -2.11
SH3RF3Q8TEJ3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SH3RF3Q8TEJ3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.86□□□□□ -2.11
SH3RF3Q8TEJ3 HSBP1P2-201ENST00000299671 229 ntBASIC1.86□□□□□ -2.11
SH3RF3Q8TEJ3 Y_RNA.57-201ENST00000362806 113 ntBASIC1.86□□□□□ -2.11
SH3RF3Q8TEJ3 MIR30A-201ENST00000385092 71 ntBASIC1.86□□□□□ -2.11
SH3RF3Q8TEJ3 AL450471.1-201ENST00000447509 127 ntBASIC1.86□□□□□ -2.11
SH3RF3Q8TEJ3 SNORD4B-201ENST00000459083 72 ntBASIC1.86□□□□□ -2.11
SH3RF3Q8TEJ3 SNORA25.13-201ENST00000516395 103 ntBASIC1.86□□□□□ -2.11
SH3RF3Q8TEJ3 BX248123.2-201ENST00000606318 124 ntBASIC1.86□□□□□ -2.11
SH3RF3Q8TEJ3 AC103810.8-201ENST00000607347 118 ntBASIC1.86□□□□□ -2.11
SH3RF3Q8TEJ3 AC008133.2-201ENST00000624540 351 ntBASIC1.86□□□□□ -2.11
SH3RF3Q8TEJ3 MIR424-201ENST00000362227 98 ntBASIC1.85□□□□□ -2.11
SH3RF3Q8TEJ3 Y_RNA.354-201ENST00000365448 111 ntBASIC1.85□□□□□ -2.11
SH3RF3Q8TEJ3 RNU6-321P-201ENST00000410912 106 ntBASIC1.85□□□□□ -2.11
SH3RF3Q8TEJ3 AC114801.3-201ENST00000510231 177 ntBASIC1.85□□□□□ -2.11
SH3RF3Q8TEJ3 MIR4764-201ENST00000580680 88 ntBASIC1.85□□□□□ -2.11
SH3RF3Q8TEJ3 U7.4-201ENST00000614961 63 ntBASIC1.85□□□□□ -2.11
SH3RF3Q8TEJ3 AP001362.1-201ENST00000625165 124 ntBASIC1.85□□□□□ -2.11
SH3RF3Q8TEJ3 RNU6-480P-201ENST00000384332 107 ntBASIC1.84□□□□□ -2.11
SH3RF3Q8TEJ3 Y_RNA.545-201ENST00000384652 105 ntBASIC1.84□□□□□ -2.11
SH3RF3Q8TEJ3 RNU6-129P-201ENST00000391022 107 ntBASIC1.84□□□□□ -2.11
SH3RF3Q8TEJ3 MIR934-201ENST00000401241 83 ntBASIC1.84□□□□□ -2.11
SH3RF3Q8TEJ3 RNU4-83P-201ENST00000410863 133 ntBASIC1.84□□□□□ -2.11
SH3RF3Q8TEJ3 RNU7-85P-201ENST00000458851 63 ntBASIC1.84□□□□□ -2.11
SH3RF3Q8TEJ3 snoU13.27-201ENST00000459278 104 ntBASIC1.84□□□□□ -2.11
SH3RF3Q8TEJ3 MIR4709-201ENST00000577272 72 ntBASIC1.84□□□□□ -2.11
SH3RF3Q8TEJ3 AL512598.1-201ENST00000610158 273 ntBASIC1.84□□□□□ -2.11
SH3RF3Q8TEJ3 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.84□□□□□ -2.11
SH3RF3Q8TEJ3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
SH3RF3Q8TEJ3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
SH3RF3Q8TEJ3 Y_RNA.532-201ENST00000384590 113 ntBASIC1.83□□□□□ -2.12
SH3RF3Q8TEJ3 RNU6-1067P-201ENST00000384752 107 ntBASIC1.83□□□□□ -2.12
SH3RF3Q8TEJ3 RNU6-1237P-201ENST00000384777 107 ntBASIC1.83□□□□□ -2.12
SH3RF3Q8TEJ3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
SH3RF3Q8TEJ3 SNORA67.6-201ENST00000391093 99 ntBASIC1.83□□□□□ -2.12
SH3RF3Q8TEJ3 SCARNA18B-201ENST00000458806 135 ntBASIC1.83□□□□□ -2.12
SH3RF3Q8TEJ3 AC005908.1-201ENST00000468701 347 ntBASIC1.83□□□□□ -2.12
SH3RF3Q8TEJ3 RNU7-43P-201ENST00000516554 64 ntBASIC1.83□□□□□ -2.12
SH3RF3Q8TEJ3 MTND5P40-201ENST00000559945 246 ntBASIC1.83□□□□□ -2.12
SH3RF3Q8TEJ3 AC141846.1-201ENST00000568348 142 ntBASIC1.83□□□□□ -2.12
SH3RF3Q8TEJ3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.83□□□□□ -2.12
SH3RF3Q8TEJ3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SH3RF3Q8TEJ3 RNA5SP363-201ENST00000365072 115 ntBASIC1.82□□□□□ -2.12
SH3RF3Q8TEJ3 SNORD38.2-201ENST00000384470 69 ntBASIC1.82□□□□□ -2.12
SH3RF3Q8TEJ3 RNU6-519P-201ENST00000410590 108 ntBASIC1.82□□□□□ -2.12
SH3RF3Q8TEJ3 TRMT112P2-201ENST00000512910 132 ntBASIC1.82□□□□□ -2.12
SH3RF3Q8TEJ3 MIR3134-201ENST00000579433 74 ntBASIC1.82□□□□□ -2.12
SH3RF3Q8TEJ3 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
SH3RF3Q8TEJ3 MIRLET7A1-201ENST00000362295 80 ntBASIC1.81□□□□□ -2.12
SH3RF3Q8TEJ3 SNORD115-37-201ENST00000363768 82 ntBASIC1.81□□□□□ -2.12
SH3RF3Q8TEJ3 MIR517C-201ENST00000385103 95 ntBASIC1.81□□□□□ -2.12
SH3RF3Q8TEJ3 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
SH3RF3Q8TEJ3 MIR1236-201ENST00000408340 102 ntBASIC1.81□□□□□ -2.12
SH3RF3Q8TEJ3 AC244023.1-201ENST00000426884 112 ntBASIC1.81□□□□□ -2.12
SH3RF3Q8TEJ3 SNRPGP12-201ENST00000449481 213 ntBASIC1.81□□□□□ -2.12
SH3RF3Q8TEJ3 RNU7-41P-201ENST00000515917 61 ntBASIC1.81□□□□□ -2.12
SH3RF3Q8TEJ3 RNU6-557P-201ENST00000516842 110 ntBASIC1.81□□□□□ -2.12
SH3RF3Q8TEJ3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.81□□□□□ -2.12
SH3RF3Q8TEJ3 AC242498.1-201ENST00000604134 111 ntBASIC1.81□□□□□ -2.12
SH3RF3Q8TEJ3 MIR8074-201ENST00000615081 81 ntBASIC1.81□□□□□ -2.12
SH3RF3Q8TEJ3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.81□□□□□ -2.12
SH3RF3Q8TEJ3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
SH3RF3Q8TEJ3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.8□□□□□ -2.12
SH3RF3Q8TEJ3 Y_RNA.224-201ENST00000364308 111 ntBASIC1.8□□□□□ -2.12
SH3RF3Q8TEJ3 RNY1P2-201ENST00000364820 117 ntBASIC1.8□□□□□ -2.12
SH3RF3Q8TEJ3 RNU2-7P-201ENST00000410794 178 ntBASIC1.8□□□□□ -2.12
SH3RF3Q8TEJ3 SNORA31.17-201ENST00000516953 127 ntBASIC1.8□□□□□ -2.12
SH3RF3Q8TEJ3 CYP3A52P-201ENST00000563326 91 ntBASIC1.8□□□□□ -2.12
SH3RF3Q8TEJ3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.8□□□□□ -2.12
SH3RF3Q8TEJ3 AL662814.1-201ENST00000617364 121 ntBASIC1.8□□□□□ -2.12
SH3RF3Q8TEJ3 RNU4-32P-201ENST00000363404 141 ntBASIC1.79□□□□□ -2.12
SH3RF3Q8TEJ3 Y_RNA.168-201ENST00000363740 102 ntBASIC1.79□□□□□ -2.12
SH3RF3Q8TEJ3 RNU6-590P-201ENST00000365039 107 ntBASIC1.79□□□□□ -2.12
SH3RF3Q8TEJ3 MIR520C-201ENST00000385005 87 ntBASIC1.79□□□□□ -2.12
SH3RF3Q8TEJ3 MIR520H-201ENST00000385126 88 ntBASIC1.79□□□□□ -2.12
SH3RF3Q8TEJ3 RNA5SP481-201ENST00000516814 122 ntBASIC1.79□□□□□ -2.12
SH3RF3Q8TEJ3 AC138749.4-201ENST00000563970 127 ntBASIC1.79□□□□□ -2.12
SH3RF3Q8TEJ3 AC090897.1-201ENST00000580909 226 ntBASIC1.79□□□□□ -2.12
SH3RF3Q8TEJ3 SNORA63.2-201ENST00000362603 126 ntBASIC1.78□□□□□ -2.12
SH3RF3Q8TEJ3 RNU6-203P-201ENST00000384038 104 ntBASIC1.78□□□□□ -2.12
SH3RF3Q8TEJ3 RNU6-949P-201ENST00000384040 107 ntBASIC1.78□□□□□ -2.12
SH3RF3Q8TEJ3 SNORD38B-201ENST00000384690 67 ntBASIC1.78□□□□□ -2.12
SH3RF3Q8TEJ3 MIR194-1-201ENST00000384892 85 ntBASIC1.78□□□□□ -2.12
SH3RF3Q8TEJ3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
SH3RF3Q8TEJ3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
SH3RF3Q8TEJ3 AL354695.1-201ENST00000427935 228 ntBASIC1.78□□□□□ -2.12
SH3RF3Q8TEJ3 SNORA31.24-201ENST00000517232 57 ntBASIC1.78□□□□□ -2.12
SH3RF3Q8TEJ3 AL359821.1-201ENST00000605519 182 ntBASIC1.78□□□□□ -2.12
SH3RF3Q8TEJ3 MIR8066-201ENST00000617280 78 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 224.9 ms