Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 AP004217.1-201ENST00000480579 346 ntBASIC2.58□□□□□ -2
SNIP1Q8TAD8 Y_RNA.809-201ENST00000516058 95 ntBASIC2.58□□□□□ -2
SNIP1Q8TAD8 U6.100-201ENST00000636230 99 ntBASIC2.58□□□□□ -2
SNIP1Q8TAD8 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
SNIP1Q8TAD8 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.58□□□□□ -2
SNIP1Q8TAD8 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SNIP1Q8TAD8 MIR194-1-201ENST00000384892 85 ntBASIC2.57□□□□□ -2
SNIP1Q8TAD8 RNU6-1052P-201ENST00000411398 104 ntBASIC2.57□□□□□ -2
SNIP1Q8TAD8 RNU6-719P-201ENST00000516671 104 ntBASIC2.57□□□□□ -2
SNIP1Q8TAD8 SNORA31.17-201ENST00000516953 127 ntBASIC2.57□□□□□ -2
SNIP1Q8TAD8 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.57□□□□□ -2
SNIP1Q8TAD8 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
SNIP1Q8TAD8 MIR101-2-201ENST00000362195 79 ntBASIC2.56□□□□□ -2
SNIP1Q8TAD8 RNU6-1260P-201ENST00000362944 107 ntBASIC2.56□□□□□ -2
SNIP1Q8TAD8 RNU6-403P-201ENST00000363163 104 ntBASIC2.56□□□□□ -2
SNIP1Q8TAD8 SNORA24B-201ENST00000384176 131 ntBASIC2.56□□□□□ -2
SNIP1Q8TAD8 MIR519A1-201ENST00000385257 85 ntBASIC2.56□□□□□ -2
SNIP1Q8TAD8 SNORD41-201ENST00000386967 70 ntBASIC2.56□□□□□ -2
SNIP1Q8TAD8 SNORA40.6-201ENST00000391153 128 ntBASIC2.56□□□□□ -2
SNIP1Q8TAD8 RPL30P7-201ENST00000479312 323 ntBASIC2.56□□□□□ -2
SNIP1Q8TAD8 RNU6-977P-201ENST00000516411 103 ntBASIC2.56□□□□□ -2
SNIP1Q8TAD8 AC069503.3-201ENST00000618674 145 ntBASIC2.56□□□□□ -2
SNIP1Q8TAD8 AL109933.3-201ENST00000619095 188 ntBASIC2.56□□□□□ -2
SNIP1Q8TAD8 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
SNIP1Q8TAD8 RNU1-51P-201ENST00000365345 176 ntBASIC2.55□□□□□ -2
SNIP1Q8TAD8 RNU6-482P-201ENST00000391068 107 ntBASIC2.55□□□□□ -2
SNIP1Q8TAD8 RNA5SP425-201ENST00000410336 112 ntBASIC2.55□□□□□ -2
SNIP1Q8TAD8 AC003982.1-202ENST00000469928 248 ntBASIC2.55□□□□□ -2
SNIP1Q8TAD8 MIR548H5-201ENST00000580314 60 ntBASIC2.55□□□□□ -2
SNIP1Q8TAD8 AC013244.2-201ENST00000603396 103 ntBASIC2.55□□□□□ -2
SNIP1Q8TAD8 U1.36-201ENST00000620684 176 ntBASIC2.55□□□□□ -2
SNIP1Q8TAD8 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SNIP1Q8TAD8 RNA5SP259-201ENST00000365541 109 ntBASIC2.54□□□□□ -2
SNIP1Q8TAD8 MIR512-1-201ENST00000384913 84 ntBASIC2.54□□□□□ -2
SNIP1Q8TAD8 MT-TN-201ENST00000387400 73 ntBASIC2.54□□□□□ -2
SNIP1Q8TAD8 RNA5SP282-201ENST00000516355 108 ntBASIC2.54□□□□□ -2
SNIP1Q8TAD8 MIR2115-201ENST00000516657 100 ntBASIC2.54□□□□□ -2
SNIP1Q8TAD8 MIR4648-201ENST00000580107 72 ntBASIC2.54□□□□□ -2
SNIP1Q8TAD8 MIR3670-2-201ENST00000582974 65 ntBASIC2.54□□□□□ -2
SNIP1Q8TAD8 MIR3670-1-201ENST00000584160 65 ntBASIC2.54□□□□□ -2
SNIP1Q8TAD8 MIR3670-3-201ENST00000584855 65 ntBASIC2.54□□□□□ -2
SNIP1Q8TAD8 RNU7-10P-201ENST00000607194 63 ntBASIC2.54□□□□□ -2
SNIP1Q8TAD8 MIR3670-4-201ENST00000612260 65 ntBASIC2.54□□□□□ -2
SNIP1Q8TAD8 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
SNIP1Q8TAD8 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.53□□□□□ -2
SNIP1Q8TAD8 RNU1-36P-201ENST00000365130 165 ntBASIC2.53□□□□□ -2
SNIP1Q8TAD8 RNU4-53P-201ENST00000410828 140 ntBASIC2.53□□□□□ -2
SNIP1Q8TAD8 RNU6-1054P-201ENST00000411293 104 ntBASIC2.53□□□□□ -2
SNIP1Q8TAD8 AL603825.1-201ENST00000438481 80 ntBASIC2.53□□□□□ -2
SNIP1Q8TAD8 AC108210.2-201ENST00000503681 201 ntBASIC2.53□□□□□ -2
SNIP1Q8TAD8 Y_RNA.676-201ENST00000516393 96 ntBASIC2.53□□□□□ -2
SNIP1Q8TAD8 RNU6-922P-201ENST00000516753 99 ntBASIC2.53□□□□□ -2
SNIP1Q8TAD8 AC015712.3-201ENST00000559380 164 ntBASIC2.53□□□□□ -2
SNIP1Q8TAD8 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.53□□□□□ -2
SNIP1Q8TAD8 MTRNR2L2-201ENST00000604882 87 ntBASIC2.53□□□□□ -2
SNIP1Q8TAD8 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.53□□□□□ -2
SNIP1Q8TAD8 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.53□□□□□ -2
SNIP1Q8TAD8 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.52□□□□□ -2.01
SNIP1Q8TAD8 RN7SL274P-201ENST00000492268 272 ntBASIC2.52□□□□□ -2.01
SNIP1Q8TAD8 MIR6733-201ENST00000635723 61 ntBASIC2.52□□□□□ -2.01
SNIP1Q8TAD8 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SNIP1Q8TAD8 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SNIP1Q8TAD8 MIR26A1-201ENST00000362205 77 ntBASIC2.51□□□□□ -2.01
SNIP1Q8TAD8 VTRNA1-1-201ENST00000363120 99 ntBASIC2.51□□□□□ -2.01
SNIP1Q8TAD8 MIR6516-201ENST00000630554 81 ntBASIC2.51□□□□□ -2.01
SNIP1Q8TAD8 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
SNIP1Q8TAD8 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SNIP1Q8TAD8 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SNIP1Q8TAD8 Y_RNA.56-201ENST00000362798 112 ntBASIC2.5□□□□□ -2.01
SNIP1Q8TAD8 RNU6-829P-201ENST00000363700 112 ntBASIC2.5□□□□□ -2.01
SNIP1Q8TAD8 RNU6-1187P-201ENST00000364771 110 ntBASIC2.5□□□□□ -2.01
SNIP1Q8TAD8 MIR451A-201ENST00000385059 72 ntBASIC2.5□□□□□ -2.01
SNIP1Q8TAD8 RNU6-935P-201ENST00000410371 100 ntBASIC2.5□□□□□ -2.01
SNIP1Q8TAD8 RN7SKP223-201ENST00000410582 62 ntBASIC2.5□□□□□ -2.01
SNIP1Q8TAD8 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.5□□□□□ -2.01
SNIP1Q8TAD8 snoU13.25-201ENST00000458945 104 ntBASIC2.5□□□□□ -2.01
SNIP1Q8TAD8 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SNIP1Q8TAD8 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.5□□□□□ -2.01
SNIP1Q8TAD8 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.49□□□□□ -2.01
SNIP1Q8TAD8 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
SNIP1Q8TAD8 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SNIP1Q8TAD8 RNA5SP289-201ENST00000362332 137 ntBASIC2.49□□□□□ -2.01
SNIP1Q8TAD8 AL356320.1-201ENST00000429616 163 ntBASIC2.49□□□□□ -2.01
SNIP1Q8TAD8 AL591806.2-201ENST00000433122 173 ntBASIC2.49□□□□□ -2.01
SNIP1Q8TAD8 Y_RNA.697-201ENST00000516776 113 ntBASIC2.49□□□□□ -2.01
SNIP1Q8TAD8 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SNIP1Q8TAD8 Y_RNA.236-201ENST00000364427 111 ntBASIC2.48□□□□□ -2.01
SNIP1Q8TAD8 MIR513A1-201ENST00000385138 129 ntBASIC2.48□□□□□ -2.01
SNIP1Q8TAD8 MIR764-201ENST00000390811 85 ntBASIC2.48□□□□□ -2.01
SNIP1Q8TAD8 RNU6ATAC33P-201ENST00000408647 126 ntBASIC2.48□□□□□ -2.01
SNIP1Q8TAD8 MIR18B-201ENST00000454574 71 ntBASIC2.48□□□□□ -2.01
SNIP1Q8TAD8 MIR4773-1-201ENST00000637203 78 ntBASIC2.48□□□□□ -2.01
SNIP1Q8TAD8 MIR27B-201ENST00000385129 97 ntBASIC2.47□□□□□ -2.01
SNIP1Q8TAD8 RNA5SP95-201ENST00000410319 137 ntBASIC2.47□□□□□ -2.01
SNIP1Q8TAD8 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.47□□□□□ -2.01
SNIP1Q8TAD8 AC023934.1-201ENST00000574529 2389 ntBASIC2.47□□□□□ -2.01
SNIP1Q8TAD8 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SNIP1Q8TAD8 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
SNIP1Q8TAD8 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SNIP1Q8TAD8 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 202.1 ms