Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 RNU6-165P-201ENST00000517170 99 ntBASIC1.6□□□□□ -2.15
SHCBP1Q8NEM2 MIR6516-201ENST00000630554 81 ntBASIC1.6□□□□□ -2.15
SHCBP1Q8NEM2 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
SHCBP1Q8NEM2 SNORD33-201ENST00000362761 85 ntBASIC1.59□□□□□ -2.15
SHCBP1Q8NEM2 SNORD38.1-201ENST00000363863 68 ntBASIC1.59□□□□□ -2.15
SHCBP1Q8NEM2 RNU6-949P-201ENST00000384040 107 ntBASIC1.59□□□□□ -2.15
SHCBP1Q8NEM2 MIR7-2-201ENST00000384970 110 ntBASIC1.59□□□□□ -2.15
SHCBP1Q8NEM2 RNU6-205P-201ENST00000390858 107 ntBASIC1.59□□□□□ -2.15
SHCBP1Q8NEM2 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.59□□□□□ -2.15
SHCBP1Q8NEM2 RNU6-447P-201ENST00000410293 104 ntBASIC1.59□□□□□ -2.15
SHCBP1Q8NEM2 RNU6-1118P-201ENST00000410382 104 ntBASIC1.59□□□□□ -2.15
SHCBP1Q8NEM2 RNU6-1076P-201ENST00000410397 104 ntBASIC1.59□□□□□ -2.15
SHCBP1Q8NEM2 RNU6-355P-201ENST00000410427 104 ntBASIC1.59□□□□□ -2.15
SHCBP1Q8NEM2 RNU6-791P-201ENST00000410467 104 ntBASIC1.59□□□□□ -2.15
SHCBP1Q8NEM2 RNU6-705P-201ENST00000410601 104 ntBASIC1.59□□□□□ -2.15
SHCBP1Q8NEM2 RNU6-1100P-201ENST00000410691 104 ntBASIC1.59□□□□□ -2.15
SHCBP1Q8NEM2 RNU6-860P-201ENST00000410860 104 ntBASIC1.59□□□□□ -2.15
SHCBP1Q8NEM2 RNU6-1217P-201ENST00000411276 104 ntBASIC1.59□□□□□ -2.15
SHCBP1Q8NEM2 RNU6-785P-201ENST00000411324 104 ntBASIC1.59□□□□□ -2.15
SHCBP1Q8NEM2 RPS29P28-201ENST00000446439 141 ntBASIC1.59□□□□□ -2.15
SHCBP1Q8NEM2 RNU7-48P-201ENST00000458875 63 ntBASIC1.59□□□□□ -2.15
SHCBP1Q8NEM2 AC023790.1-201ENST00000482174 347 ntBASIC1.59□□□□□ -2.15
SHCBP1Q8NEM2 MIR2115-201ENST00000516657 100 ntBASIC1.59□□□□□ -2.15
SHCBP1Q8NEM2 MIR3937-201ENST00000580135 106 ntBASIC1.59□□□□□ -2.15
SHCBP1Q8NEM2 MIR4264-201ENST00000583520 66 ntBASIC1.59□□□□□ -2.15
SHCBP1Q8NEM2 MIR6078-201ENST00000611069 100 ntBASIC1.59□□□□□ -2.15
SHCBP1Q8NEM2 U6.90-201ENST00000614007 104 ntBASIC1.59□□□□□ -2.15
SHCBP1Q8NEM2 U6.70-201ENST00000620287 104 ntBASIC1.59□□□□□ -2.15
SHCBP1Q8NEM2 MIR6734-201ENST00000621166 68 ntBASIC1.59□□□□□ -2.15
SHCBP1Q8NEM2 MIR103A2-201ENST00000362154 78 ntBASIC1.58□□□□□ -2.16
SHCBP1Q8NEM2 RNA5SP264-201ENST00000363115 107 ntBASIC1.58□□□□□ -2.16
SHCBP1Q8NEM2 RNU6-1163P-201ENST00000364516 107 ntBASIC1.58□□□□□ -2.16
SHCBP1Q8NEM2 RNU6-53P-201ENST00000365367 106 ntBASIC1.58□□□□□ -2.16
SHCBP1Q8NEM2 MT-TN-201ENST00000387400 73 ntBASIC1.58□□□□□ -2.16
SHCBP1Q8NEM2 AC026421.1-201ENST00000519101 163 ntBASIC1.58□□□□□ -2.16
SHCBP1Q8NEM2 MIR3664-201ENST00000579074 99 ntBASIC1.58□□□□□ -2.16
SHCBP1Q8NEM2 AP000753.3-201ENST00000604083 169 ntBASIC1.58□□□□□ -2.16
SHCBP1Q8NEM2 uc_338.6-201ENST00000613544 171 ntBASIC1.58□□□□□ -2.16
SHCBP1Q8NEM2 SEPT14P17-201ENST00000617978 177 ntBASIC1.58□□□□□ -2.16
SHCBP1Q8NEM2 MIR30D-201ENST00000362283 70 ntBASIC1.57□□□□□ -2.16
SHCBP1Q8NEM2 RNU6-654P-201ENST00000364373 107 ntBASIC1.57□□□□□ -2.16
SHCBP1Q8NEM2 RNA5SP95-201ENST00000410319 137 ntBASIC1.57□□□□□ -2.16
SHCBP1Q8NEM2 RPL30P7-201ENST00000479312 323 ntBASIC1.57□□□□□ -2.16
SHCBP1Q8NEM2 Y_RNA.705-201ENST00000516862 110 ntBASIC1.57□□□□□ -2.16
SHCBP1Q8NEM2 MIR4439-201ENST00000583746 80 ntBASIC1.57□□□□□ -2.16
SHCBP1Q8NEM2 MIR3660-201ENST00000584845 100 ntBASIC1.57□□□□□ -2.16
SHCBP1Q8NEM2 Y_RNA.98-201ENST00000363109 102 ntBASIC1.56□□□□□ -2.16
SHCBP1Q8NEM2 RNU6-1065P-201ENST00000384513 106 ntBASIC1.56□□□□□ -2.16
SHCBP1Q8NEM2 MIR320A-201ENST00000385302 82 ntBASIC1.56□□□□□ -2.16
SHCBP1Q8NEM2 RNU6-1165P-201ENST00000410119 107 ntBASIC1.56□□□□□ -2.16
SHCBP1Q8NEM2 RNU6-613P-201ENST00000410412 108 ntBASIC1.56□□□□□ -2.16
SHCBP1Q8NEM2 RNU6-887P-201ENST00000410660 100 ntBASIC1.56□□□□□ -2.16
SHCBP1Q8NEM2 RNY4P29-201ENST00000410801 97 ntBASIC1.56□□□□□ -2.16
SHCBP1Q8NEM2 RNU7-62P-201ENST00000458856 62 ntBASIC1.56□□□□□ -2.16
SHCBP1Q8NEM2 RNU11-2P-201ENST00000516898 142 ntBASIC1.56□□□□□ -2.16
SHCBP1Q8NEM2 AL512310.8-201ENST00000550183 120 ntBASIC1.56□□□□□ -2.16
SHCBP1Q8NEM2 AC133485.1-201ENST00000567176 124 ntBASIC1.56□□□□□ -2.16
SHCBP1Q8NEM2 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.56□□□□□ -2.16
SHCBP1Q8NEM2 AP001362.1-201ENST00000625165 124 ntBASIC1.56□□□□□ -2.16
SHCBP1Q8NEM2 Y_RNA.96-201ENST00000363092 109 ntBASIC1.55□□□□□ -2.16
SHCBP1Q8NEM2 SNORD114-22-201ENST00000365423 72 ntBASIC1.55□□□□□ -2.16
SHCBP1Q8NEM2 Y_RNA.388-201ENST00000383919 113 ntBASIC1.55□□□□□ -2.16
SHCBP1Q8NEM2 RNU6-813P-201ENST00000384691 107 ntBASIC1.55□□□□□ -2.16
SHCBP1Q8NEM2 MIR548G-201ENST00000408442 89 ntBASIC1.55□□□□□ -2.16
SHCBP1Q8NEM2 AC062037.1-201ENST00000605302 128 ntBASIC1.55□□□□□ -2.16
SHCBP1Q8NEM2 RNU6-86P-201ENST00000606534 107 ntBASIC1.55□□□□□ -2.16
SHCBP1Q8NEM2 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.55□□□□□ -2.16
SHCBP1Q8NEM2 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SHCBP1Q8NEM2 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.54□□□□□ -2.16
SHCBP1Q8NEM2 MIR377-201ENST00000362145 69 ntBASIC1.54□□□□□ -2.16
SHCBP1Q8NEM2 Y_RNA.190-201ENST00000363964 101 ntBASIC1.54□□□□□ -2.16
SHCBP1Q8NEM2 RNU6-1134P-201ENST00000365156 101 ntBASIC1.54□□□□□ -2.16
SHCBP1Q8NEM2 SNORA26.2-201ENST00000390922 122 ntBASIC1.54□□□□□ -2.16
SHCBP1Q8NEM2 RNU6-972P-201ENST00000391208 107 ntBASIC1.54□□□□□ -2.16
SHCBP1Q8NEM2 RPS27P16-201ENST00000425758 201 ntBASIC1.54□□□□□ -2.16
SHCBP1Q8NEM2 RNU6-902P-201ENST00000517212 91 ntBASIC1.54□□□□□ -2.16
SHCBP1Q8NEM2 AL161722.3-201ENST00000605789 2983 ntBASIC1.54□□□□□ -2.16
SHCBP1Q8NEM2 Y_RNA.168-201ENST00000363740 102 ntBASIC1.53□□□□□ -2.16
SHCBP1Q8NEM2 RNY1P2-201ENST00000364820 117 ntBASIC1.53□□□□□ -2.16
SHCBP1Q8NEM2 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
SHCBP1Q8NEM2 U8.15-201ENST00000390947 134 ntBASIC1.53□□□□□ -2.16
SHCBP1Q8NEM2 AC004223.1-201ENST00000479840 271 ntBASIC1.53□□□□□ -2.16
SHCBP1Q8NEM2 RNU6-90P-201ENST00000606352 106 ntBASIC1.53□□□□□ -2.16
SHCBP1Q8NEM2 AC103810.7-201ENST00000607821 91 ntBASIC1.53□□□□□ -2.16
SHCBP1Q8NEM2 RNU6-1244P-201ENST00000363614 108 ntBASIC1.52□□□□□ -2.17
SHCBP1Q8NEM2 RNU6-580P-201ENST00000365159 107 ntBASIC1.52□□□□□ -2.17
SHCBP1Q8NEM2 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
SHCBP1Q8NEM2 SNORA40.6-201ENST00000391153 128 ntBASIC1.52□□□□□ -2.17
SHCBP1Q8NEM2 Y_RNA.593-201ENST00000410292 98 ntBASIC1.52□□□□□ -2.17
SHCBP1Q8NEM2 SPINT5P-201ENST00000448174 155 ntBASIC1.52□□□□□ -2.17
SHCBP1Q8NEM2 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.52□□□□□ -2.17
SHCBP1Q8NEM2 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.52□□□□□ -2.17
SHCBP1Q8NEM2 AC138749.4-201ENST00000563970 127 ntBASIC1.52□□□□□ -2.17
SHCBP1Q8NEM2 AC012676.2-201ENST00000619258 186 ntBASIC1.52□□□□□ -2.17
SHCBP1Q8NEM2 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.52□□□□□ -2.17
SHCBP1Q8NEM2 Y_RNA.173-201ENST00000363776 113 ntBASIC1.51□□□□□ -2.17
SHCBP1Q8NEM2 SNORD58A-201ENST00000383875 65 ntBASIC1.51□□□□□ -2.17
SHCBP1Q8NEM2 SNORD38.2-201ENST00000384470 69 ntBASIC1.51□□□□□ -2.17
SHCBP1Q8NEM2 Y_RNA.567-201ENST00000384736 106 ntBASIC1.51□□□□□ -2.17
SHCBP1Q8NEM2 AC048334.1-201ENST00000477975 159 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 177.9 ms