Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 U4.2-201ENST00000618561 85 ntBASIC-3.49□□□□□ -2.97
LINC00643Q86TS7 RNU6-235P-201ENST00000362644 107 ntBASIC-3.5□□□□□ -2.97
LINC00643Q86TS7 AC103591.3-201ENST00000608684 209 ntBASIC-3.5□□□□□ -2.97
LINC00643Q86TS7 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-3.5□□□□□ -2.97
LINC00643Q86TS7 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-3.5□□□□□ -2.97
LINC00643Q86TS7 Y_RNA.10-201ENST00000362371 110 ntBASIC-3.51□□□□□ -2.97
LINC00643Q86TS7 Y_RNA.231-201ENST00000364358 102 ntBASIC-3.51□□□□□ -2.97
LINC00643Q86TS7 RNU6-990P-201ENST00000364385 104 ntBASIC-3.51□□□□□ -2.97
LINC00643Q86TS7 RNU6-119P-201ENST00000364882 107 ntBASIC-3.51□□□□□ -2.97
LINC00643Q86TS7 RNU6-841P-201ENST00000383872 107 ntBASIC-3.51□□□□□ -2.97
LINC00643Q86TS7 Y_RNA.432-201ENST00000384087 111 ntBASIC-3.51□□□□□ -2.97
LINC00643Q86TS7 SNORD19-201ENST00000391191 68 ntBASIC-3.51□□□□□ -2.97
LINC00643Q86TS7 MIR1244-1-201ENST00000612829 85 ntBASIC-3.51□□□□□ -2.97
LINC00643Q86TS7 MIR1244-3-201ENST00000635744 85 ntBASIC-3.51□□□□□ -2.97
LINC00643Q86TS7 MIR1244-2-201ENST00000636449 85 ntBASIC-3.51□□□□□ -2.97
LINC00643Q86TS7 MIR1244-4-202ENST00000636813 85 ntBASIC-3.51□□□□□ -2.97
LINC00643Q86TS7 Y_RNA.301-201ENST00000364990 103 ntBASIC-3.52□□□□□ -2.97
LINC00643Q86TS7 Y_RNA.360-201ENST00000365512 102 ntBASIC-3.52□□□□□ -2.97
LINC00643Q86TS7 SNORD116-11-201ENST00000383882 92 ntBASIC-3.52□□□□□ -2.97
LINC00643Q86TS7 RNU6-763P-201ENST00000390865 106 ntBASIC-3.52□□□□□ -2.97
LINC00643Q86TS7 RNU6-248P-201ENST00000410720 107 ntBASIC-3.52□□□□□ -2.97
LINC00643Q86TS7 MIR2053-201ENST00000459295 91 ntBASIC-3.52□□□□□ -2.97
LINC00643Q86TS7 SCARNA15-202ENST00000516881 127 ntBASIC-3.52□□□□□ -2.97
LINC00643Q86TS7 MTATP6P25-201ENST00000574491 261 ntBASIC-3.52□□□□□ -2.97
LINC00643Q86TS7 RNU6-89P-201ENST00000606519 100 ntBASIC-3.52□□□□□ -2.97
LINC00643Q86TS7 RNU6-194P-201ENST00000363862 105 ntBASIC-3.53□□□□□ -2.97
LINC00643Q86TS7 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-3.53□□□□□ -2.97
LINC00643Q86TS7 Y_RNA.603-201ENST00000410571 108 ntBASIC-3.53□□□□□ -2.97
LINC00643Q86TS7 RNU4-69P-201ENST00000410677 143 ntBASIC-3.53□□□□□ -2.97
LINC00643Q86TS7 AL353193.1-201ENST00000421444 268 ntBASIC-3.53□□□□□ -2.97
LINC00643Q86TS7 SNORD5.1-201ENST00000458800 75 ntBASIC-3.53□□□□□ -2.97
LINC00643Q86TS7 Y_RNA.644-201ENST00000459006 113 ntBASIC-3.53□□□□□ -2.97
LINC00643Q86TS7 RNU6-845P-201ENST00000362578 103 ntBASIC-3.54□□□□□ -2.98
LINC00643Q86TS7 RNA5SP405-201ENST00000363059 114 ntBASIC-3.54□□□□□ -2.98
LINC00643Q86TS7 ELOCP20-201ENST00000422460 345 ntBASIC-3.54□□□□□ -2.98
LINC00643Q86TS7 RNU6-261P-201ENST00000459506 102 ntBASIC-3.54□□□□□ -2.98
LINC00643Q86TS7 RNU6-118P-201ENST00000516552 102 ntBASIC-3.54□□□□□ -2.98
LINC00643Q86TS7 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-3.54□□□□□ -2.98
LINC00643Q86TS7 MIR4790-201ENST00000577799 79 ntBASIC-3.54□□□□□ -2.98
LINC00643Q86TS7 AC013791.1-201ENST00000616619 62 ntBASIC-3.54□□□□□ -2.98
LINC00643Q86TS7 Y_RNA.373-201ENST00000365600 103 ntBASIC-3.55□□□□□ -2.98
LINC00643Q86TS7 Y_RNA.389-201ENST00000383924 113 ntBASIC-3.55□□□□□ -2.98
LINC00643Q86TS7 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-3.55□□□□□ -2.98
LINC00643Q86TS7 RNU6-1247P-201ENST00000516622 98 ntBASIC-3.55□□□□□ -2.98
LINC00643Q86TS7 AL365205.2-201ENST00000594586 68 ntBASIC-3.55□□□□□ -2.98
LINC00643Q86TS7 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-3.55□□□□□ -2.98
LINC00643Q86TS7 Y_RNA.173-201ENST00000363776 113 ntBASIC-3.56□□□□□ -2.98
LINC00643Q86TS7 Y_RNA.556-201ENST00000384677 113 ntBASIC-3.56□□□□□ -2.98
LINC00643Q86TS7 MIR548AM-201ENST00000584298 74 ntBASIC-3.56□□□□□ -2.98
LINC00643Q86TS7 Y_RNA.380-201ENST00000365663 111 ntBASIC-3.57□□□□□ -2.98
LINC00643Q86TS7 SNORD38.2-201ENST00000384470 69 ntBASIC-3.57□□□□□ -2.98
LINC00643Q86TS7 RNU6-1228P-201ENST00000391014 107 ntBASIC-3.57□□□□□ -2.98
LINC00643Q86TS7 SNORD77B-201ENST00000391112 67 ntBASIC-3.57□□□□□ -2.98
LINC00643Q86TS7 RNU6-191P-201ENST00000516295 94 ntBASIC-3.57□□□□□ -2.98
LINC00643Q86TS7 RNU6-1149P-201ENST00000516810 97 ntBASIC-3.57□□□□□ -2.98
LINC00643Q86TS7 Y_RNA.592-201ENST00000410274 109 ntBASIC-3.58□□□□□ -2.98
LINC00643Q86TS7 RNU6-1156P-201ENST00000410365 100 ntBASIC-3.58□□□□□ -2.98
LINC00643Q86TS7 MTCO2P19-201ENST00000427513 598 ntBASIC-3.58□□□□□ -2.98
LINC00643Q86TS7 SEPT14P8-201ENST00000508026 178 ntBASIC-3.58□□□□□ -2.98
LINC00643Q86TS7 U6.92-201ENST00000636464 89 ntBASIC-3.58□□□□□ -2.98
LINC00643Q86TS7 Y_RNA.178-201ENST00000363832 102 ntBASIC-3.59□□□□□ -2.98
LINC00643Q86TS7 Y_RNA.299-201ENST00000364973 94 ntBASIC-3.59□□□□□ -2.98
LINC00643Q86TS7 MIR34C-201ENST00000384831 77 ntBASIC-3.59□□□□□ -2.98
LINC00643Q86TS7 SNORA69.1-201ENST00000390904 137 ntBASIC-3.59□□□□□ -2.98
LINC00643Q86TS7 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-3.59□□□□□ -2.98
LINC00643Q86TS7 RNU7-66P-201ENST00000459469 62 ntBASIC-3.59□□□□□ -2.98
LINC00643Q86TS7 Y_RNA.691-201ENST00000516611 103 ntBASIC-3.59□□□□□ -2.98
LINC00643Q86TS7 MIR3123-201ENST00000583417 75 ntBASIC-3.59□□□□□ -2.98
LINC00643Q86TS7 AC073869.6-201ENST00000640656 341 ntBASIC-3.59□□□□□ -2.98
LINC00643Q86TS7 Y_RNA.293-201ENST00000364908 93 ntBASIC-3.6□□□□□ -2.99
LINC00643Q86TS7 Y_RNA.346-201ENST00000365385 112 ntBASIC-3.6□□□□□ -2.99
LINC00643Q86TS7 Y_RNA.491-201ENST00000384417 107 ntBASIC-3.6□□□□□ -2.99
LINC00643Q86TS7 Y_RNA.655-201ENST00000515919 96 ntBASIC-3.6□□□□□ -2.99
LINC00643Q86TS7 RNU7-154P-201ENST00000516194 62 ntBASIC-3.6□□□□□ -2.99
LINC00643Q86TS7 RNU7-110P-201ENST00000516891 62 ntBASIC-3.6□□□□□ -2.99
LINC00643Q86TS7 AP002392.1-201ENST00000537692 208 ntBASIC-3.6□□□□□ -2.99
LINC00643Q86TS7 RNU6-495P-201ENST00000362995 107 ntBASIC-3.61□□□□□ -2.99
LINC00643Q86TS7 Y_RNA.201-201ENST00000364052 96 ntBASIC-3.61□□□□□ -2.99
LINC00643Q86TS7 RNU6-728P-201ENST00000365375 104 ntBASIC-3.61□□□□□ -2.99
LINC00643Q86TS7 RNU6-1040P-201ENST00000383974 107 ntBASIC-3.61□□□□□ -2.99
LINC00643Q86TS7 SNORA15B-2-201ENST00000384058 135 ntBASIC-3.61□□□□□ -2.99
LINC00643Q86TS7 SNORA15B-1-201ENST00000384334 135 ntBASIC-3.61□□□□□ -2.99
LINC00643Q86TS7 MIR526A2-201ENST00000390198 65 ntBASIC-3.61□□□□□ -2.99
LINC00643Q86TS7 AC082651.2-201ENST00000496833 166 ntBASIC-3.61□□□□□ -2.99
LINC00643Q86TS7 RNU2-35P-201ENST00000516446 142 ntBASIC-3.61□□□□□ -2.99
LINC00643Q86TS7 MIR5692C2-201ENST00000577959 77 ntBASIC-3.61□□□□□ -2.99
LINC00643Q86TS7 AC084782.3-201ENST00000612282 578 ntBASIC-3.61□□□□□ -2.99
LINC00643Q86TS7 AP000720.1-201ENST00000625091 483 ntBASIC-3.61□□□□□ -2.99
LINC00643Q86TS7 RNU6-774P-201ENST00000363238 107 ntBASIC-3.62□□□□□ -2.99
LINC00643Q86TS7 RNU6-553P-201ENST00000364047 96 ntBASIC-3.62□□□□□ -2.99
LINC00643Q86TS7 Y_RNA.211-201ENST00000364164 101 ntBASIC-3.62□□□□□ -2.99
LINC00643Q86TS7 Z83846.1-201ENST00000446798 265 ntBASIC-3.62□□□□□ -2.99
LINC00643Q86TS7 IGHVII-40-1-201ENST00000517316 58 ntBASIC-3.62□□□□□ -2.99
LINC00643Q86TS7 ELOCP32-201ENST00000548625 324 ntBASIC-3.62□□□□□ -2.99
LINC00643Q86TS7 MTND3P12-201ENST00000559068 328 ntBASIC-3.62□□□□□ -2.99
LINC00643Q86TS7 CYP3A54P-201ENST00000566950 75 ntBASIC-3.62□□□□□ -2.99
LINC00643Q86TS7 AL021368.1-201ENST00000607490 540 ntBASIC-3.62□□□□□ -2.99
LINC00643Q86TS7 MIR6128-201ENST00000615528 109 ntBASIC-3.62□□□□□ -2.99
LINC00643Q86TS7 Y_RNA.3-201ENST00000362331 103 ntBASIC-3.63□□□□□ -2.99
LINC00643Q86TS7 Y_RNA.530-201ENST00000384587 101 ntBASIC-3.63□□□□□ -2.99
Retrieved 100 of 98,524 protein–RNA pairs in 729.2 ms