Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 RNU6-554P-201ENST00000410466 106 ntBASIC0.74□□□□□ -2.29
NHLRC1Q6VVB1 RNU7-113P-201ENST00000459273 62 ntBASIC0.74□□□□□ -2.29
NHLRC1Q6VVB1 SNORD115-19-201ENST00000363098 82 ntBASIC0.73□□□□□ -2.29
NHLRC1Q6VVB1 SNORD115-18-201ENST00000363293 82 ntBASIC0.73□□□□□ -2.29
NHLRC1Q6VVB1 SNORA63.5-201ENST00000363548 123 ntBASIC0.73□□□□□ -2.29
NHLRC1Q6VVB1 RNA5SP325-201ENST00000363756 130 ntBASIC0.73□□□□□ -2.29
NHLRC1Q6VVB1 SNORD115-17-201ENST00000364612 82 ntBASIC0.73□□□□□ -2.29
NHLRC1Q6VVB1 RNU6-616P-201ENST00000384353 107 ntBASIC0.73□□□□□ -2.29
NHLRC1Q6VVB1 SNORA18-201ENST00000384416 132 ntBASIC0.73□□□□□ -2.29
NHLRC1Q6VVB1 SNORA2B-201ENST00000384583 137 ntBASIC0.73□□□□□ -2.29
NHLRC1Q6VVB1 MIR216A-201ENST00000385063 110 ntBASIC0.73□□□□□ -2.29
NHLRC1Q6VVB1 RNU6-205P-201ENST00000390858 107 ntBASIC0.73□□□□□ -2.29
NHLRC1Q6VVB1 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.73□□□□□ -2.29
NHLRC1Q6VVB1 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.73□□□□□ -2.29
NHLRC1Q6VVB1 AL022718.1-201ENST00000412004 84 ntBASIC0.73□□□□□ -2.29
NHLRC1Q6VVB1 RNA5SP33-201ENST00000516687 98 ntBASIC0.73□□□□□ -2.29
NHLRC1Q6VVB1 RNU7-6P-201ENST00000516845 62 ntBASIC0.73□□□□□ -2.29
NHLRC1Q6VVB1 RNU7-35P-201ENST00000517174 62 ntBASIC0.73□□□□□ -2.29
NHLRC1Q6VVB1 AC036111.3-201ENST00000526389 112 ntBASIC0.73□□□□□ -2.29
NHLRC1Q6VVB1 MIR4698-201ENST00000577795 80 ntBASIC0.73□□□□□ -2.29
NHLRC1Q6VVB1 MIR1-1-201ENST00000362147 71 ntBASIC0.72□□□□□ -2.29
NHLRC1Q6VVB1 MIR450A1-201ENST00000362262 91 ntBASIC0.72□□□□□ -2.29
NHLRC1Q6VVB1 MIR30D-201ENST00000362283 70 ntBASIC0.72□□□□□ -2.29
NHLRC1Q6VVB1 RNU6-369P-201ENST00000362515 102 ntBASIC0.72□□□□□ -2.29
NHLRC1Q6VVB1 SNORD114-2-201ENST00000363953 78 ntBASIC0.72□□□□□ -2.29
NHLRC1Q6VVB1 Y_RNA.205-201ENST00000364128 113 ntBASIC0.72□□□□□ -2.29
NHLRC1Q6VVB1 RNU6-1107P-201ENST00000364817 104 ntBASIC0.72□□□□□ -2.29
NHLRC1Q6VVB1 U8.6-201ENST00000364939 135 ntBASIC0.72□□□□□ -2.29
NHLRC1Q6VVB1 RNY1P13-201ENST00000365030 105 ntBASIC0.72□□□□□ -2.29
NHLRC1Q6VVB1 RNU6-147P-201ENST00000383983 107 ntBASIC0.72□□□□□ -2.29
NHLRC1Q6VVB1 RNU6-880P-201ENST00000384526 107 ntBASIC0.72□□□□□ -2.29
NHLRC1Q6VVB1 MIR605-201ENST00000385078 83 ntBASIC0.72□□□□□ -2.29
NHLRC1Q6VVB1 MT-TN-201ENST00000387400 73 ntBASIC0.72□□□□□ -2.29
NHLRC1Q6VVB1 RNU6-679P-201ENST00000391003 106 ntBASIC0.72□□□□□ -2.29
NHLRC1Q6VVB1 RNU4-69P-201ENST00000410677 143 ntBASIC0.72□□□□□ -2.29
NHLRC1Q6VVB1 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.72□□□□□ -2.29
NHLRC1Q6VVB1 RNU6-537P-201ENST00000517277 103 ntBASIC0.72□□□□□ -2.29
NHLRC1Q6VVB1 CYP3A137P-201ENST00000562436 69 ntBASIC0.72□□□□□ -2.29
NHLRC1Q6VVB1 MIR4679-2-201ENST00000578358 77 ntBASIC0.72□□□□□ -2.29
NHLRC1Q6VVB1 RN7SL793P-201ENST00000583259 296 ntBASIC0.72□□□□□ -2.29
NHLRC1Q6VVB1 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.72□□□□□ -2.29
NHLRC1Q6VVB1 Y_RNA.168-201ENST00000363740 102 ntBASIC0.71□□□□□ -2.3
NHLRC1Q6VVB1 Y_RNA.213-201ENST00000364178 111 ntBASIC0.71□□□□□ -2.3
NHLRC1Q6VVB1 Y_RNA.247-201ENST00000364500 92 ntBASIC0.71□□□□□ -2.3
NHLRC1Q6VVB1 RNU6-1237P-201ENST00000384777 107 ntBASIC0.71□□□□□ -2.3
NHLRC1Q6VVB1 AC015818.7-201ENST00000428754 109 ntBASIC0.71□□□□□ -2.3
NHLRC1Q6VVB1 AC087499.7-201ENST00000441958 109 ntBASIC0.71□□□□□ -2.3
NHLRC1Q6VVB1 snoU13.2-201ENST00000459201 104 ntBASIC0.71□□□□□ -2.3
NHLRC1Q6VVB1 SNORD67.1-201ENST00000516618 108 ntBASIC0.71□□□□□ -2.3
NHLRC1Q6VVB1 MIR3163-201ENST00000581592 73 ntBASIC0.71□□□□□ -2.3
NHLRC1Q6VVB1 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.71□□□□□ -2.3
NHLRC1Q6VVB1 AL662814.1-201ENST00000617364 121 ntBASIC0.71□□□□□ -2.3
NHLRC1Q6VVB1 Y_RNA.323-201ENST00000365157 109 ntBASIC0.7□□□□□ -2.3
NHLRC1Q6VVB1 RNU6-580P-201ENST00000365159 107 ntBASIC0.7□□□□□ -2.3
NHLRC1Q6VVB1 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
NHLRC1Q6VVB1 RNU6-1014P-201ENST00000383940 103 ntBASIC0.7□□□□□ -2.3
NHLRC1Q6VVB1 RNY1P4-201ENST00000384595 115 ntBASIC0.7□□□□□ -2.3
NHLRC1Q6VVB1 MIR206-201ENST00000384872 86 ntBASIC0.7□□□□□ -2.3
NHLRC1Q6VVB1 MIR588-201ENST00000384900 83 ntBASIC0.7□□□□□ -2.3
NHLRC1Q6VVB1 RPL39P34-201ENST00000477141 156 ntBASIC0.7□□□□□ -2.3
NHLRC1Q6VVB1 RNU7-137P-201ENST00000516788 62 ntBASIC0.7□□□□□ -2.3
NHLRC1Q6VVB1 AC068339.1-201ENST00000526965 141 ntBASIC0.7□□□□□ -2.3
NHLRC1Q6VVB1 AC141846.1-201ENST00000568348 142 ntBASIC0.7□□□□□ -2.3
NHLRC1Q6VVB1 MIR3152-201ENST00000579801 74 ntBASIC0.7□□□□□ -2.3
NHLRC1Q6VVB1 RNU6-94P-201ENST00000607728 107 ntBASIC0.7□□□□□ -2.3
NHLRC1Q6VVB1 AC105081.1-201ENST00000617727 106 ntBASIC0.7□□□□□ -2.3
NHLRC1Q6VVB1 AL162726.3-218ENST00000636401 95 ntBASIC0.7□□□□□ -2.3
NHLRC1Q6VVB1 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.7□□□□□ -2.3
NHLRC1Q6VVB1 MIR377-201ENST00000362145 69 ntBASIC0.69□□□□□ -2.3
NHLRC1Q6VVB1 RNY4P6-201ENST00000363667 96 ntBASIC0.69□□□□□ -2.3
NHLRC1Q6VVB1 SNORD38B-201ENST00000384690 67 ntBASIC0.69□□□□□ -2.3
NHLRC1Q6VVB1 MIR577-201ENST00000385196 96 ntBASIC0.69□□□□□ -2.3
NHLRC1Q6VVB1 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
NHLRC1Q6VVB1 RNU6-1321P-201ENST00000390905 107 ntBASIC0.69□□□□□ -2.3
NHLRC1Q6VVB1 RNU6-816P-201ENST00000390914 107 ntBASIC0.69□□□□□ -2.3
NHLRC1Q6VVB1 U8.15-201ENST00000390947 134 ntBASIC0.69□□□□□ -2.3
NHLRC1Q6VVB1 RNU6-1268P-201ENST00000391214 107 ntBASIC0.69□□□□□ -2.3
NHLRC1Q6VVB1 RNU6-1239P-201ENST00000391310 107 ntBASIC0.69□□□□□ -2.3
NHLRC1Q6VVB1 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.69□□□□□ -2.3
NHLRC1Q6VVB1 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.69□□□□□ -2.3
NHLRC1Q6VVB1 RNU7-79P-201ENST00000516082 62 ntBASIC0.69□□□□□ -2.3
NHLRC1Q6VVB1 RNU6-1006P-201ENST00000516998 103 ntBASIC0.69□□□□□ -2.3
NHLRC1Q6VVB1 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.69□□□□□ -2.3
NHLRC1Q6VVB1 MIR5009-201ENST00000578736 100 ntBASIC0.69□□□□□ -2.3
NHLRC1Q6VVB1 MIR548Z-201ENST00000584743 97 ntBASIC0.69□□□□□ -2.3
NHLRC1Q6VVB1 SNORD38B-202ENST00000625943 69 ntBASIC0.69□□□□□ -2.3
NHLRC1Q6VVB1 AC091304.10-201ENST00000641554 121 ntBASIC0.69□□□□□ -2.3
NHLRC1Q6VVB1 AL589743.1-201ENST00000551932 2712 ntBASIC0.69□□□□□ -2.3
NHLRC1Q6VVB1 RNU6-1298P-201ENST00000362456 101 ntBASIC0.68□□□□□ -2.3
NHLRC1Q6VVB1 RNU6-363P-201ENST00000362895 105 ntBASIC0.68□□□□□ -2.3
NHLRC1Q6VVB1 RNU4-67P-201ENST00000364569 141 ntBASIC0.68□□□□□ -2.3
NHLRC1Q6VVB1 Y_RNA.328-201ENST00000365208 113 ntBASIC0.68□□□□□ -2.3
NHLRC1Q6VVB1 Y_RNA.360-201ENST00000365512 102 ntBASIC0.68□□□□□ -2.3
NHLRC1Q6VVB1 MIR34C-201ENST00000384831 77 ntBASIC0.68□□□□□ -2.3
NHLRC1Q6VVB1 MIR590-201ENST00000385008 97 ntBASIC0.68□□□□□ -2.3
NHLRC1Q6VVB1 MIR100-201ENST00000385259 80 ntBASIC0.68□□□□□ -2.3
NHLRC1Q6VVB1 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
NHLRC1Q6VVB1 MIR1827-201ENST00000408549 66 ntBASIC0.68□□□□□ -2.3
NHLRC1Q6VVB1 RNU6-1165P-201ENST00000410119 107 ntBASIC0.68□□□□□ -2.3
NHLRC1Q6VVB1 AL606490.4-201ENST00000423117 127 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms