Protein–RNA interactions for Protein: Q6P087

RPUSD3, Mitochondrial mRNA pseudouridine synthase RPUSD3, humanhuman

Known RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3Q6P087 MIR760-201ENST00000390220 80 ntBASIC-0.03□□□□□ -2.41
RPUSD3Q6P087 RNU7-129P-201ENST00000516128 62 ntBASIC-0.03□□□□□ -2.41
RPUSD3Q6P087 RNA5SP236-201ENST00000516169 116 ntBASIC-0.03□□□□□ -2.41
RPUSD3Q6P087 RNU6-327P-201ENST00000516270 127 ntBASIC-0.03□□□□□ -2.41
RPUSD3Q6P087 RNU7-137P-201ENST00000516788 62 ntBASIC-0.03□□□□□ -2.41
RPUSD3Q6P087 AC138907.4-201ENST00000570107 226 ntBASIC-0.03□□□□□ -2.41
RPUSD3Q6P087 MIR4667-201ENST00000578933 66 ntBASIC-0.03□□□□□ -2.41
RPUSD3Q6P087 RNU1-29P-201ENST00000606574 126 ntBASIC-0.03□□□□□ -2.41
RPUSD3Q6P087 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.04□□□□□ -2.42
RPUSD3Q6P087 RNU6-694P-201ENST00000364071 147 ntBASIC-0.04□□□□□ -2.42
RPUSD3Q6P087 RNA5SP128-201ENST00000365305 116 ntBASIC-0.04□□□□□ -2.42
RPUSD3Q6P087 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
RPUSD3Q6P087 AC141557.1-201ENST00000540982 400 ntBASIC-0.04□□□□□ -2.42
RPUSD3Q6P087 MIR3646-201ENST00000578301 84 ntBASIC-0.04□□□□□ -2.42
RPUSD3Q6P087 AC104408.1-201ENST00000605241 170 ntBASIC-0.04□□□□□ -2.42
RPUSD3Q6P087 U4.1-201ENST00000620349 87 ntBASIC-0.04□□□□□ -2.42
RPUSD3Q6P087 SNORD114-5-201ENST00000362928 70 ntBASIC-0.05□□□□□ -2.42
RPUSD3Q6P087 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.05□□□□□ -2.42
RPUSD3Q6P087 RNU6-1020P-201ENST00000363684 107 ntBASIC-0.05□□□□□ -2.42
RPUSD3Q6P087 RNU6-429P-201ENST00000384582 108 ntBASIC-0.05□□□□□ -2.42
RPUSD3Q6P087 RNU6-768P-201ENST00000384683 107 ntBASIC-0.05□□□□□ -2.42
RPUSD3Q6P087 PCNPP3-201ENST00000393579 471 ntBASIC-0.05□□□□□ -2.42
RPUSD3Q6P087 SNORD67.1-201ENST00000516618 108 ntBASIC-0.05□□□□□ -2.42
RPUSD3Q6P087 MIR3128-201ENST00000581957 66 ntBASIC-0.05□□□□□ -2.42
RPUSD3Q6P087 MIR548AE2-201ENST00000583456 67 ntBASIC-0.05□□□□□ -2.42
RPUSD3Q6P087 MIR4743-201ENST00000584576 69 ntBASIC-0.05□□□□□ -2.42
RPUSD3Q6P087 U7.6-201ENST00000610841 64 ntBASIC-0.05□□□□□ -2.42
RPUSD3Q6P087 MIR6844-201ENST00000637122 62 ntBASIC-0.05□□□□□ -2.42
RPUSD3Q6P087 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.06□□□□□ -2.42
RPUSD3Q6P087 RNU6-161P-201ENST00000363051 106 ntBASIC-0.06□□□□□ -2.42
RPUSD3Q6P087 SNORD115-24-201ENST00000363528 82 ntBASIC-0.06□□□□□ -2.42
RPUSD3Q6P087 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.06□□□□□ -2.42
RPUSD3Q6P087 RNY1P2-201ENST00000364820 117 ntBASIC-0.06□□□□□ -2.42
RPUSD3Q6P087 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.06□□□□□ -2.42
RPUSD3Q6P087 AC244505.6-201ENST00000452829 130 ntBASIC-0.06□□□□□ -2.42
RPUSD3Q6P087 AC138749.4-201ENST00000563970 127 ntBASIC-0.06□□□□□ -2.42
RPUSD3Q6P087 AC021443.1-201ENST00000604478 211 ntBASIC-0.06□□□□□ -2.42
RPUSD3Q6P087 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.06□□□□□ -2.42
RPUSD3Q6P087 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.07□□□□□ -2.42
RPUSD3Q6P087 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
RPUSD3Q6P087 RNU6-918P-201ENST00000391219 106 ntBASIC-0.07□□□□□ -2.42
RPUSD3Q6P087 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.07□□□□□ -2.42
RPUSD3Q6P087 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.07□□□□□ -2.42
RPUSD3Q6P087 RNU6-652P-201ENST00000365488 107 ntBASIC-0.08□□□□□ -2.42
RPUSD3Q6P087 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.08□□□□□ -2.42
RPUSD3Q6P087 SNORD77B-201ENST00000391112 67 ntBASIC-0.08□□□□□ -2.42
RPUSD3Q6P087 RNU4-69P-201ENST00000410677 143 ntBASIC-0.08□□□□□ -2.42
RPUSD3Q6P087 RNU6-1045P-201ENST00000516321 107 ntBASIC-0.08□□□□□ -2.42
RPUSD3Q6P087 SNORA63.5-201ENST00000363548 123 ntBASIC-0.09□□□□□ -2.42
RPUSD3Q6P087 RNA5SP245-201ENST00000364239 121 ntBASIC-0.09□□□□□ -2.42
RPUSD3Q6P087 SNORA32.1-201ENST00000364514 115 ntBASIC-0.09□□□□□ -2.42
RPUSD3Q6P087 RNU6-702P-201ENST00000364982 107 ntBASIC-0.09□□□□□ -2.42
RPUSD3Q6P087 RNU6-187P-201ENST00000384139 106 ntBASIC-0.09□□□□□ -2.42
RPUSD3Q6P087 RNU6-127P-201ENST00000390897 107 ntBASIC-0.09□□□□□ -2.42
RPUSD3Q6P087 AL118496.2-201ENST00000448300 230 ntBASIC-0.09□□□□□ -2.42
RPUSD3Q6P087 RNU7-164P-201ENST00000459221 62 ntBASIC-0.09□□□□□ -2.42
RPUSD3Q6P087 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.09□□□□□ -2.42
RPUSD3Q6P087 MIR5706-201ENST00000579841 80 ntBASIC-0.09□□□□□ -2.42
RPUSD3Q6P087 MIR3149-201ENST00000584629 83 ntBASIC-0.09□□□□□ -2.42
RPUSD3Q6P087 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.09□□□□□ -2.42
RPUSD3Q6P087 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.09□□□□□ -2.42
RPUSD3Q6P087 Y_RNA.193-201ENST00000363979 102 ntBASIC-0.1□□□□□ -2.43
RPUSD3Q6P087 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.1□□□□□ -2.43
RPUSD3Q6P087 RNU6-35P-201ENST00000384530 107 ntBASIC-0.1□□□□□ -2.43
RPUSD3Q6P087 RPL39P34-201ENST00000477141 156 ntBASIC-0.1□□□□□ -2.43
RPUSD3Q6P087 RNU6-240P-201ENST00000516098 97 ntBASIC-0.1□□□□□ -2.43
RPUSD3Q6P087 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.11□□□□□ -2.43
RPUSD3Q6P087 MIR635-201ENST00000384830 98 ntBASIC-0.11□□□□□ -2.43
RPUSD3Q6P087 MIR145-201ENST00000384967 88 ntBASIC-0.11□□□□□ -2.43
RPUSD3Q6P087 RNU2-35P-201ENST00000516446 142 ntBASIC-0.11□□□□□ -2.43
RPUSD3Q6P087 RNU6-111P-201ENST00000517179 105 ntBASIC-0.11□□□□□ -2.43
RPUSD3Q6P087 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.12□□□□□ -2.43
RPUSD3Q6P087 Y_RNA.162-201ENST00000363683 102 ntBASIC-0.12□□□□□ -2.43
RPUSD3Q6P087 RNU6-726P-201ENST00000364680 107 ntBASIC-0.12□□□□□ -2.43
RPUSD3Q6P087 RNU6V-201ENST00000384105 107 ntBASIC-0.12□□□□□ -2.43
RPUSD3Q6P087 RNU6-929P-201ENST00000384429 107 ntBASIC-0.12□□□□□ -2.43
RPUSD3Q6P087 MIR568-201ENST00000385036 95 ntBASIC-0.12□□□□□ -2.43
RPUSD3Q6P087 MIR1295B-201ENST00000636144 60 ntBASIC-0.12□□□□□ -2.43
RPUSD3Q6P087 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.13□□□□□ -2.43
RPUSD3Q6P087 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.13□□□□□ -2.43
RPUSD3Q6P087 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.13□□□□□ -2.43
RPUSD3Q6P087 RNU6-239P-201ENST00000390990 99 ntBASIC-0.13□□□□□ -2.43
RPUSD3Q6P087 MIR1912-201ENST00000410389 80 ntBASIC-0.13□□□□□ -2.43
RPUSD3Q6P087 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.13□□□□□ -2.43
RPUSD3Q6P087 RNU6-782P-201ENST00000516852 104 ntBASIC-0.13□□□□□ -2.43
RPUSD3Q6P087 AC105081.1-201ENST00000617727 106 ntBASIC-0.13□□□□□ -2.43
RPUSD3Q6P087 AC073869.9-201ENST00000641610 120 ntBASIC-0.13□□□□□ -2.43
RPUSD3Q6P087 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.14□□□□□ -2.43
RPUSD3Q6P087 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.14□□□□□ -2.43
RPUSD3Q6P087 RNU6-196P-201ENST00000384315 107 ntBASIC-0.14□□□□□ -2.43
RPUSD3Q6P087 MIR643-201ENST00000385267 97 ntBASIC-0.14□□□□□ -2.43
RPUSD3Q6P087 SNORD37.2-201ENST00000391075 66 ntBASIC-0.14□□□□□ -2.43
RPUSD3Q6P087 AL359881.1-201ENST00000602916 267 ntBASIC-0.14□□□□□ -2.43
RPUSD3Q6P087 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.15□□□□□ -2.43
RPUSD3Q6P087 MIR593-201ENST00000384856 100 ntBASIC-0.15□□□□□ -2.43
RPUSD3Q6P087 RNU7-48P-201ENST00000458875 63 ntBASIC-0.15□□□□□ -2.43
RPUSD3Q6P087 RNU7-104P-201ENST00000459398 79 ntBASIC-0.15□□□□□ -2.43
RPUSD3Q6P087 AC104692.1-201ENST00000472406 90 ntBASIC-0.15□□□□□ -2.43
RPUSD3Q6P087 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.16□□□□□ -2.44
RPUSD3Q6P087 MIR548I2-201ENST00000408348 149 ntBASIC-0.16□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 205.2 ms