Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 AL137067.1-201ENST00000615933 120 ntBASIC0.47□□□□□ -2.33
KRT39Q6A163 PVT1_3.1-201ENST00000620853 95 ntBASIC0.47□□□□□ -2.33
KRT39Q6A163 MIR6513-201ENST00000621188 64 ntBASIC0.47□□□□□ -2.33
KRT39Q6A163 SNORD115-2-201ENST00000362842 82 ntBASIC0.46□□□□□ -2.34
KRT39Q6A163 SNORD115-20-201ENST00000365099 82 ntBASIC0.46□□□□□ -2.34
KRT39Q6A163 MIR613-201ENST00000385248 95 ntBASIC0.46□□□□□ -2.34
KRT39Q6A163 AL603908.1-201ENST00000406098 201 ntBASIC0.46□□□□□ -2.34
KRT39Q6A163 SNORD93-201ENST00000408813 74 ntBASIC0.46□□□□□ -2.34
KRT39Q6A163 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.46□□□□□ -2.34
KRT39Q6A163 RNU7-107P-201ENST00000459121 61 ntBASIC0.46□□□□□ -2.34
KRT39Q6A163 RNU7-113P-201ENST00000459273 62 ntBASIC0.46□□□□□ -2.34
KRT39Q6A163 RN7SKP19-201ENST00000516016 252 ntBASIC0.46□□□□□ -2.34
KRT39Q6A163 AC141846.1-201ENST00000568348 142 ntBASIC0.46□□□□□ -2.34
KRT39Q6A163 MIR548AE2-201ENST00000583456 67 ntBASIC0.46□□□□□ -2.34
KRT39Q6A163 RNY1P13-201ENST00000365030 105 ntBASIC0.45□□□□□ -2.34
KRT39Q6A163 SNORA32-201ENST00000384072 121 ntBASIC0.45□□□□□ -2.34
KRT39Q6A163 Y_RNA.531-201ENST00000384589 121 ntBASIC0.45□□□□□ -2.34
KRT39Q6A163 MIRLET7F2-201ENST00000385277 83 ntBASIC0.45□□□□□ -2.34
KRT39Q6A163 U8.15-201ENST00000390947 134 ntBASIC0.45□□□□□ -2.34
KRT39Q6A163 RNU6-735P-201ENST00000410612 107 ntBASIC0.45□□□□□ -2.34
KRT39Q6A163 RNU4-83P-201ENST00000410863 133 ntBASIC0.45□□□□□ -2.34
KRT39Q6A163 Y_RNA.630-201ENST00000411370 108 ntBASIC0.45□□□□□ -2.34
KRT39Q6A163 AL022718.1-201ENST00000412004 84 ntBASIC0.45□□□□□ -2.34
KRT39Q6A163 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.45□□□□□ -2.34
KRT39Q6A163 RNU6-1211P-201ENST00000459179 105 ntBASIC0.45□□□□□ -2.34
KRT39Q6A163 RNU6-772P-201ENST00000516042 105 ntBASIC0.45□□□□□ -2.34
KRT39Q6A163 RNA5SP33-201ENST00000516687 98 ntBASIC0.45□□□□□ -2.34
KRT39Q6A163 RNU6-1234P-201ENST00000516877 103 ntBASIC0.45□□□□□ -2.34
KRT39Q6A163 RNU6-448P-201ENST00000517052 107 ntBASIC0.45□□□□□ -2.34
KRT39Q6A163 RNU7-35P-201ENST00000517174 62 ntBASIC0.45□□□□□ -2.34
KRT39Q6A163 AL359881.1-201ENST00000602916 267 ntBASIC0.45□□□□□ -2.34
KRT39Q6A163 TUG1_4.1-201ENST00000619464 181 ntBASIC0.45□□□□□ -2.34
KRT39Q6A163 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.45□□□□□ -2.34
KRT39Q6A163 RNU6-647P-201ENST00000364243 107 ntBASIC0.44□□□□□ -2.34
KRT39Q6A163 SNORD58C-201ENST00000365223 64 ntBASIC0.44□□□□□ -2.34
KRT39Q6A163 RNY1P4-201ENST00000384595 115 ntBASIC0.44□□□□□ -2.34
KRT39Q6A163 RNA5SP94-201ENST00000516917 108 ntBASIC0.44□□□□□ -2.34
KRT39Q6A163 AC092634.7-201ENST00000621022 103 ntBASIC0.44□□□□□ -2.34
KRT39Q6A163 MIR5087-201ENST00000635826 76 ntBASIC0.44□□□□□ -2.34
KRT39Q6A163 AL589743.1-201ENST00000551932 2712 ntBASIC0.43□□□□□ -2.34
KRT39Q6A163 Y_RNA.71-201ENST00000362892 104 ntBASIC0.43□□□□□ -2.34
KRT39Q6A163 RNU6-949P-201ENST00000384040 107 ntBASIC0.43□□□□□ -2.34
KRT39Q6A163 MIR216A-201ENST00000385063 110 ntBASIC0.43□□□□□ -2.34
KRT39Q6A163 RNU6-1307P-201ENST00000391012 103 ntBASIC0.43□□□□□ -2.34
KRT39Q6A163 Y_RNA.588-201ENST00000391254 102 ntBASIC0.43□□□□□ -2.34
KRT39Q6A163 MIR1263-201ENST00000408324 86 ntBASIC0.43□□□□□ -2.34
KRT39Q6A163 RNU6-893P-201ENST00000458841 100 ntBASIC0.43□□□□□ -2.34
KRT39Q6A163 SNORD67.1-201ENST00000516618 108 ntBASIC0.43□□□□□ -2.34
KRT39Q6A163 MIR3910-1-201ENST00000580936 111 ntBASIC0.43□□□□□ -2.34
KRT39Q6A163 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.43□□□□□ -2.34
KRT39Q6A163 MIRLET7D-201ENST00000362263 87 ntBASIC0.42□□□□□ -2.34
KRT39Q6A163 RNA5SP517-201ENST00000364724 117 ntBASIC0.42□□□□□ -2.34
KRT39Q6A163 RNU6-81P-201ENST00000365608 104 ntBASIC0.42□□□□□ -2.34
KRT39Q6A163 RNU6-679P-201ENST00000391003 106 ntBASIC0.42□□□□□ -2.34
KRT39Q6A163 RNU4-69P-201ENST00000410677 143 ntBASIC0.42□□□□□ -2.34
KRT39Q6A163 RNU6-1086P-201ENST00000410930 100 ntBASIC0.42□□□□□ -2.34
KRT39Q6A163 TMSB4XP3-201ENST00000445144 114 ntBASIC0.42□□□□□ -2.34
KRT39Q6A163 RNU7-79P-201ENST00000516082 62 ntBASIC0.42□□□□□ -2.34
KRT39Q6A163 RNU6-659P-201ENST00000516454 104 ntBASIC0.42□□□□□ -2.34
KRT39Q6A163 RNU6-1061P-201ENST00000516530 99 ntBASIC0.42□□□□□ -2.34
KRT39Q6A163 RNU7-137P-201ENST00000516788 62 ntBASIC0.42□□□□□ -2.34
KRT39Q6A163 AC087741.2-201ENST00000619415 172 ntBASIC0.42□□□□□ -2.34
KRT39Q6A163 AC243829.3-201ENST00000622177 108 ntBASIC0.42□□□□□ -2.34
KRT39Q6A163 Y_RNA.13-201ENST00000362403 112 ntBASIC0.41□□□□□ -2.34
KRT39Q6A163 Y_RNA.198-201ENST00000364013 98 ntBASIC0.41□□□□□ -2.34
KRT39Q6A163 MIR539-201ENST00000365690 78 ntBASIC0.41□□□□□ -2.34
KRT39Q6A163 SNORD116-14-201ENST00000383894 92 ntBASIC0.41□□□□□ -2.34
KRT39Q6A163 SNORD116-17-201ENST00000383929 92 ntBASIC0.41□□□□□ -2.34
KRT39Q6A163 RNU6-80P-201ENST00000384195 107 ntBASIC0.41□□□□□ -2.34
KRT39Q6A163 RNU6-616P-201ENST00000384353 107 ntBASIC0.41□□□□□ -2.34
KRT39Q6A163 SNORD116-15-201ENST00000384445 92 ntBASIC0.41□□□□□ -2.34
KRT39Q6A163 Y_RNA.528-201ENST00000384575 108 ntBASIC0.41□□□□□ -2.34
KRT39Q6A163 RNU6-959P-201ENST00000384671 107 ntBASIC0.41□□□□□ -2.34
KRT39Q6A163 SNORD116-19-201ENST00000384729 92 ntBASIC0.41□□□□□ -2.34
KRT39Q6A163 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
KRT39Q6A163 RPL39P25-201ENST00000449384 154 ntBASIC0.41□□□□□ -2.34
KRT39Q6A163 SNORD33.1-201ENST00000516213 88 ntBASIC0.41□□□□□ -2.34
KRT39Q6A163 Y_RNA.712-201ENST00000517011 92 ntBASIC0.41□□□□□ -2.34
KRT39Q6A163 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.41□□□□□ -2.34
KRT39Q6A163 AP003327.1-201ENST00000529684 127 ntBASIC0.41□□□□□ -2.34
KRT39Q6A163 MIR3678-201ENST00000578455 94 ntBASIC0.41□□□□□ -2.34
KRT39Q6A163 Y_RNA.773-201ENST00000607168 90 ntBASIC0.41□□□□□ -2.34
KRT39Q6A163 MIR3914-2-201ENST00000637339 95 ntBASIC0.41□□□□□ -2.34
KRT39Q6A163 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
KRT39Q6A163 MTND5P18-201ENST00000445624 1801 ntBASIC0.41□□□□□ -2.34
KRT39Q6A163 AL157777.2-201ENST00000258070 137 ntBASIC0.4□□□□□ -2.35
KRT39Q6A163 Y_RNA.261-201ENST00000364631 102 ntBASIC0.4□□□□□ -2.35
KRT39Q6A163 SNORD113-1-201ENST00000365321 69 ntBASIC0.4□□□□□ -2.35
KRT39Q6A163 MIR206-201ENST00000384872 86 ntBASIC0.4□□□□□ -2.35
KRT39Q6A163 MIR936-201ENST00000401264 98 ntBASIC0.4□□□□□ -2.35
KRT39Q6A163 RNA5SP136-201ENST00000410906 107 ntBASIC0.4□□□□□ -2.35
KRT39Q6A163 RNU6-1333P-201ENST00000516162 93 ntBASIC0.4□□□□□ -2.35
KRT39Q6A163 MIR4711-201ENST00000578274 70 ntBASIC0.4□□□□□ -2.35
KRT39Q6A163 MIR4491-201ENST00000581087 68 ntBASIC0.4□□□□□ -2.35
KRT39Q6A163 AC025166.1-201ENST00000612411 163 ntBASIC0.4□□□□□ -2.35
KRT39Q6A163 MIR6082-201ENST00000613604 109 ntBASIC0.4□□□□□ -2.35
KRT39Q6A163 AL365222.1-201ENST00000614661 98 ntBASIC0.4□□□□□ -2.35
KRT39Q6A163 AC105081.1-201ENST00000617727 106 ntBASIC0.4□□□□□ -2.35
KRT39Q6A163 MIR1255B1-201ENST00000636325 63 ntBASIC0.4□□□□□ -2.35
KRT39Q6A163 SNORD115-19-201ENST00000363098 82 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 380.6 ms