Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 RNU6-49P-201ENST00000384256 107 ntBASIC1.55□□□□□ -2.16
E4F1Q66K89 SNORA72.6-201ENST00000384520 129 ntBASIC1.55□□□□□ -2.16
E4F1Q66K89 MIR222-201ENST00000384992 110 ntBASIC1.55□□□□□ -2.16
E4F1Q66K89 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.55□□□□□ -2.16
E4F1Q66K89 RNU7-21P-201ENST00000459430 62 ntBASIC1.55□□□□□ -2.16
E4F1Q66K89 SNORA70.22-201ENST00000517160 124 ntBASIC1.55□□□□□ -2.16
E4F1Q66K89 AC008163.1-202ENST00000636004 2889 ntBASIC1.54□□□□□ -2.16
E4F1Q66K89 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
E4F1Q66K89 Y_RNA.119-201ENST00000363301 96 ntBASIC1.54□□□□□ -2.16
E4F1Q66K89 RNU1-36P-201ENST00000365130 165 ntBASIC1.54□□□□□ -2.16
E4F1Q66K89 RNU6-934P-201ENST00000365154 107 ntBASIC1.54□□□□□ -2.16
E4F1Q66K89 RNY1P7-201ENST00000384743 110 ntBASIC1.54□□□□□ -2.16
E4F1Q66K89 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.54□□□□□ -2.16
E4F1Q66K89 MIR1257-201ENST00000408490 117 ntBASIC1.54□□□□□ -2.16
E4F1Q66K89 AC096949.1-201ENST00000412047 152 ntBASIC1.54□□□□□ -2.16
E4F1Q66K89 MIR4771-2-201ENST00000577758 74 ntBASIC1.54□□□□□ -2.16
E4F1Q66K89 MIR4771-1-201ENST00000582617 74 ntBASIC1.54□□□□□ -2.16
E4F1Q66K89 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.53□□□□□ -2.16
E4F1Q66K89 Y_RNA.96-201ENST00000363092 109 ntBASIC1.53□□□□□ -2.16
E4F1Q66K89 RNU6-1163P-201ENST00000364516 107 ntBASIC1.53□□□□□ -2.16
E4F1Q66K89 Y_RNA.369-201ENST00000365568 117 ntBASIC1.53□□□□□ -2.16
E4F1Q66K89 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
E4F1Q66K89 SNORD111-201ENST00000408139 94 ntBASIC1.53□□□□□ -2.16
E4F1Q66K89 RNU6-994P-201ENST00000410507 111 ntBASIC1.53□□□□□ -2.16
E4F1Q66K89 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.53□□□□□ -2.16
E4F1Q66K89 RNU1-98P-201ENST00000458992 160 ntBASIC1.53□□□□□ -2.16
E4F1Q66K89 RNU7-185P-201ENST00000459215 60 ntBASIC1.53□□□□□ -2.16
E4F1Q66K89 RNU7-90P-201ENST00000459216 62 ntBASIC1.53□□□□□ -2.16
E4F1Q66K89 SNORD79.1-201ENST00000516069 84 ntBASIC1.53□□□□□ -2.16
E4F1Q66K89 Y_RNA.705-201ENST00000516862 110 ntBASIC1.53□□□□□ -2.16
E4F1Q66K89 MIR4491-201ENST00000581087 68 ntBASIC1.53□□□□□ -2.16
E4F1Q66K89 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.53□□□□□ -2.16
E4F1Q66K89 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.53□□□□□ -2.16
E4F1Q66K89 AC106800.4-201ENST00000614905 153 ntBASIC1.53□□□□□ -2.16
E4F1Q66K89 U7.3-201ENST00000616123 62 ntBASIC1.53□□□□□ -2.16
E4F1Q66K89 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.53□□□□□ -2.17
E4F1Q66K89 RNU6-53P-201ENST00000365367 106 ntBASIC1.52□□□□□ -2.17
E4F1Q66K89 Y_RNA.567-201ENST00000384736 106 ntBASIC1.52□□□□□ -2.17
E4F1Q66K89 MIR517C-201ENST00000385103 95 ntBASIC1.52□□□□□ -2.17
E4F1Q66K89 RNU4-83P-201ENST00000410863 133 ntBASIC1.52□□□□□ -2.17
E4F1Q66K89 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.52□□□□□ -2.17
E4F1Q66K89 SNORA25.16-201ENST00000516741 121 ntBASIC1.52□□□□□ -2.17
E4F1Q66K89 MIR4439-201ENST00000583746 80 ntBASIC1.52□□□□□ -2.17
E4F1Q66K89 Y_RNA.290-201ENST00000364879 114 ntBASIC1.51□□□□□ -2.17
E4F1Q66K89 RNU6-813P-201ENST00000384691 107 ntBASIC1.51□□□□□ -2.17
E4F1Q66K89 RNU7-40P-201ENST00000516397 64 ntBASIC1.51□□□□□ -2.17
E4F1Q66K89 RNU6-531P-201ENST00000516694 104 ntBASIC1.51□□□□□ -2.17
E4F1Q66K89 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
E4F1Q66K89 RNU6-294P-201ENST00000364999 102 ntBASIC1.5□□□□□ -2.17
E4F1Q66K89 MIR758-201ENST00000390227 88 ntBASIC1.5□□□□□ -2.17
E4F1Q66K89 RNU6-887P-201ENST00000410660 100 ntBASIC1.5□□□□□ -2.17
E4F1Q66K89 BX276092.1-201ENST00000427368 251 ntBASIC1.5□□□□□ -2.17
E4F1Q66K89 MIR4303-201ENST00000581299 66 ntBASIC1.5□□□□□ -2.17
E4F1Q66K89 AC103810.7-201ENST00000607821 91 ntBASIC1.5□□□□□ -2.17
E4F1Q66K89 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.5□□□□□ -2.17
E4F1Q66K89 RNA5SP327-201ENST00000362494 101 ntBASIC1.49□□□□□ -2.17
E4F1Q66K89 SNORA67.6-201ENST00000391093 99 ntBASIC1.49□□□□□ -2.17
E4F1Q66K89 RNU6-972P-201ENST00000391208 107 ntBASIC1.49□□□□□ -2.17
E4F1Q66K89 Y_RNA.588-201ENST00000391254 102 ntBASIC1.49□□□□□ -2.17
E4F1Q66K89 BTF3P4-201ENST00000418852 495 ntBASIC1.49□□□□□ -2.17
E4F1Q66K89 AC104984.5-201ENST00000586878 94 ntBASIC1.49□□□□□ -2.17
E4F1Q66K89 MIR6715A-201ENST00000615929 79 ntBASIC1.49□□□□□ -2.17
E4F1Q66K89 MIR7843-201ENST00000622274 79 ntBASIC1.49□□□□□ -2.17
E4F1Q66K89 HSBP1P2-201ENST00000299671 229 ntBASIC1.48□□□□□ -2.17
E4F1Q66K89 RNU4-58P-201ENST00000363192 141 ntBASIC1.48□□□□□ -2.17
E4F1Q66K89 SNORA31.24-201ENST00000517232 57 ntBASIC1.48□□□□□ -2.17
E4F1Q66K89 SNORD53B-201ENST00000577887 78 ntBASIC1.48□□□□□ -2.17
E4F1Q66K89 MIR4679-1-201ENST00000637619 75 ntBASIC1.48□□□□□ -2.17
E4F1Q66K89 RNU6-1244P-201ENST00000363614 108 ntBASIC1.47□□□□□ -2.17
E4F1Q66K89 Y_RNA.173-201ENST00000363776 113 ntBASIC1.47□□□□□ -2.17
E4F1Q66K89 RNU6-955P-201ENST00000410497 104 ntBASIC1.47□□□□□ -2.17
E4F1Q66K89 RPS26P5-201ENST00000418544 335 ntBASIC1.47□□□□□ -2.17
E4F1Q66K89 AL591806.2-201ENST00000433122 173 ntBASIC1.47□□□□□ -2.17
E4F1Q66K89 RNU6-844P-201ENST00000517175 102 ntBASIC1.47□□□□□ -2.17
E4F1Q66K89 MIR4781-201ENST00000585250 76 ntBASIC1.47□□□□□ -2.17
E4F1Q66K89 AC020891.4-201ENST00000605745 93 ntBASIC1.47□□□□□ -2.17
E4F1Q66K89 Y_RNA.13-201ENST00000362403 112 ntBASIC1.46□□□□□ -2.18
E4F1Q66K89 SNORA25-201ENST00000384384 134 ntBASIC1.46□□□□□ -2.18
E4F1Q66K89 MIR125B2-201ENST00000385128 89 ntBASIC1.46□□□□□ -2.18
E4F1Q66K89 SNORA17.3-201ENST00000391159 129 ntBASIC1.46□□□□□ -2.18
E4F1Q66K89 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
E4F1Q66K89 MIR181B2-201ENST00000385004 89 ntBASIC1.45□□□□□ -2.18
E4F1Q66K89 MIR100-201ENST00000385259 80 ntBASIC1.45□□□□□ -2.18
E4F1Q66K89 AC004223.1-201ENST00000479840 271 ntBASIC1.45□□□□□ -2.18
E4F1Q66K89 RNU6-850P-201ENST00000516934 103 ntBASIC1.45□□□□□ -2.18
E4F1Q66K89 RNU6-548P-201ENST00000517083 115 ntBASIC1.45□□□□□ -2.18
E4F1Q66K89 MIR4676-201ENST00000583078 72 ntBASIC1.45□□□□□ -2.18
E4F1Q66K89 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
E4F1Q66K89 MIR101-2-201ENST00000362195 79 ntBASIC1.44□□□□□ -2.18
E4F1Q66K89 RNU6-1125P-201ENST00000363601 107 ntBASIC1.44□□□□□ -2.18
E4F1Q66K89 Y_RNA.190-201ENST00000363964 101 ntBASIC1.44□□□□□ -2.18
E4F1Q66K89 RNU6-1134P-201ENST00000365156 101 ntBASIC1.44□□□□□ -2.18
E4F1Q66K89 RNU6-480P-201ENST00000384332 107 ntBASIC1.44□□□□□ -2.18
E4F1Q66K89 RNU6-364P-201ENST00000384387 107 ntBASIC1.44□□□□□ -2.18
E4F1Q66K89 MIR764-201ENST00000390811 85 ntBASIC1.44□□□□□ -2.18
E4F1Q66K89 SNORD12-201ENST00000391002 90 ntBASIC1.44□□□□□ -2.18
E4F1Q66K89 AC002429.1-201ENST00000437672 148 ntBASIC1.44□□□□□ -2.18
E4F1Q66K89 AC067940.1-201ENST00000458411 300 ntBASIC1.44□□□□□ -2.18
E4F1Q66K89 RNU7-156P-201ENST00000517214 74 ntBASIC1.44□□□□□ -2.18
E4F1Q66K89 AC013244.2-201ENST00000603396 103 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 160.2 ms