Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.85□□□□□ -2.71
RIF1Q5UIP0 RNU6-816P-201ENST00000390914 107 ntBASIC-1.85□□□□□ -2.71
RIF1Q5UIP0 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.85□□□□□ -2.71
RIF1Q5UIP0 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.85□□□□□ -2.71
RIF1Q5UIP0 MTND3P21-201ENST00000433774 331 ntBASIC-1.85□□□□□ -2.71
RIF1Q5UIP0 MIR548AH-201ENST00000637109 76 ntBASIC-1.85□□□□□ -2.71
RIF1Q5UIP0 MIR6841-201ENST00000637129 72 ntBASIC-1.85□□□□□ -2.71
RIF1Q5UIP0 AL445984.1-201ENST00000637834 659 ntBASIC-1.85□□□□□ -2.71
RIF1Q5UIP0 Y_RNA.165-201ENST00000363721 102 ntBASIC-1.86□□□□□ -2.71
RIF1Q5UIP0 SNORD56.4-201ENST00000363883 71 ntBASIC-1.86□□□□□ -2.71
RIF1Q5UIP0 SNORD27-201ENST00000363981 72 ntBASIC-1.86□□□□□ -2.71
RIF1Q5UIP0 RNU6-960P-201ENST00000364056 120 ntBASIC-1.86□□□□□ -2.71
RIF1Q5UIP0 RNU6-61P-201ENST00000365528 109 ntBASIC-1.86□□□□□ -2.71
RIF1Q5UIP0 RNU2-61P-201ENST00000411069 191 ntBASIC-1.86□□□□□ -2.71
RIF1Q5UIP0 ELOCP17-201ENST00000414751 326 ntBASIC-1.86□□□□□ -2.71
RIF1Q5UIP0 USP9YP23-201ENST00000455085 407 ntBASIC-1.86□□□□□ -2.71
RIF1Q5UIP0 VN1R91P-201ENST00000594377 169 ntBASIC-1.86□□□□□ -2.71
RIF1Q5UIP0 AC097639.2-201ENST00000603159 172 ntBASIC-1.86□□□□□ -2.71
RIF1Q5UIP0 AC107905.1-201ENST00000616204 426 ntBASIC-1.86□□□□□ -2.71
RIF1Q5UIP0 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.86□□□□□ -2.71
RIF1Q5UIP0 RNU6-1214P-201ENST00000363650 109 ntBASIC-1.86□□□□□ -2.71
RIF1Q5UIP0 Y_RNA.395-201ENST00000383945 109 ntBASIC-1.86□□□□□ -2.71
RIF1Q5UIP0 RNU6-564P-201ENST00000410983 104 ntBASIC-1.86□□□□□ -2.71
RIF1Q5UIP0 MTND3P9-201ENST00000429526 346 ntBASIC-1.86□□□□□ -2.71
RIF1Q5UIP0 RNU6-893P-201ENST00000458841 100 ntBASIC-1.86□□□□□ -2.71
RIF1Q5UIP0 AC011476.5-201ENST00000615594 130 ntBASIC-1.86□□□□□ -2.71
RIF1Q5UIP0 RNU6-995P-201ENST00000391244 107 ntBASIC-1.87□□□□□ -2.71
RIF1Q5UIP0 SNORA40.9-201ENST00000515895 93 ntBASIC-1.87□□□□□ -2.71
RIF1Q5UIP0 RNU7-51P-201ENST00000516560 62 ntBASIC-1.87□□□□□ -2.71
RIF1Q5UIP0 MIR3657-201ENST00000584818 117 ntBASIC-1.87□□□□□ -2.71
RIF1Q5UIP0 AC005357.1-201ENST00000588399 301 ntBASIC-1.87□□□□□ -2.71
RIF1Q5UIP0 TRDV1-202ENST00000621643 102 ntBASIC-1.87□□□□□ -2.71
RIF1Q5UIP0 Y_RNA.137-201ENST00000363455 112 ntBASIC-1.88□□□□□ -2.71
RIF1Q5UIP0 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-1.88□□□□□ -2.71
RIF1Q5UIP0 RNU2-31P-201ENST00000516954 155 ntBASIC-1.88□□□□□ -2.71
RIF1Q5UIP0 DLEU2_5.2-201ENST00000610606 84 ntBASIC-1.88□□□□□ -2.71
RIF1Q5UIP0 AC072046.2-201ENST00000618366 268 ntBASIC-1.88□□□□□ -2.71
RIF1Q5UIP0 SNORA63.2-201ENST00000362603 126 ntBASIC-1.88□□□□□ -2.71
RIF1Q5UIP0 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.88□□□□□ -2.71
RIF1Q5UIP0 MTND3P16-201ENST00000452205 344 ntBASIC-1.88□□□□□ -2.71
RIF1Q5UIP0 RNU6-760P-201ENST00000516078 97 ntBASIC-1.88□□□□□ -2.71
RIF1Q5UIP0 RNU6-1281P-201ENST00000516223 105 ntBASIC-1.88□□□□□ -2.71
RIF1Q5UIP0 AP002392.1-201ENST00000537692 208 ntBASIC-1.88□□□□□ -2.71
RIF1Q5UIP0 MIR2681-201ENST00000581814 105 ntBASIC-1.88□□□□□ -2.71
RIF1Q5UIP0 Y_RNA.237-201ENST00000364439 102 ntBASIC-1.89□□□□□ -2.71
RIF1Q5UIP0 Y_RNA.578-201ENST00000390903 88 ntBASIC-1.89□□□□□ -2.71
RIF1Q5UIP0 RNU2-38P-201ENST00000410856 79 ntBASIC-1.89□□□□□ -2.71
RIF1Q5UIP0 RNU6-387P-201ENST00000411331 105 ntBASIC-1.89□□□□□ -2.71
RIF1Q5UIP0 MTND1P2-201ENST00000430604 821 ntBASIC-1.89□□□□□ -2.71
RIF1Q5UIP0 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.89□□□□□ -2.71
RIF1Q5UIP0 AC064836.2-201ENST00000609491 462 ntBASIC-1.89□□□□□ -2.71
RIF1Q5UIP0 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.89□□□□□ -2.71
RIF1Q5UIP0 TIMM9P2-201ENST00000419324 266 ntBASIC-1.89□□□□□ -2.71
RIF1Q5UIP0 AL117351.1-201ENST00000438864 766 ntBASIC-1.89□□□□□ -2.71
RIF1Q5UIP0 RNU6-75P-201ENST00000515944 104 ntBASIC-1.89□□□□□ -2.71
RIF1Q5UIP0 RNU6-864P-201ENST00000516256 108 ntBASIC-1.89□□□□□ -2.71
RIF1Q5UIP0 AC009779.6-201ENST00000603972 165 ntBASIC-1.89□□□□□ -2.71
RIF1Q5UIP0 AC006566.1-201ENST00000608943 513 ntBASIC-1.89□□□□□ -2.71
RIF1Q5UIP0 AL365265.1-201ENST00000621045 234 ntBASIC-1.89□□□□□ -2.71
RIF1Q5UIP0 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.9□□□□□ -2.71
RIF1Q5UIP0 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.9□□□□□ -2.71
RIF1Q5UIP0 Z82188.1-201ENST00000436709 154 ntBASIC-1.9□□□□□ -2.71
RIF1Q5UIP0 RNU7-80P-201ENST00000459562 61 ntBASIC-1.9□□□□□ -2.71
RIF1Q5UIP0 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.9□□□□□ -2.71
RIF1Q5UIP0 MTND4LP18-201ENST00000526864 291 ntBASIC-1.9□□□□□ -2.71
RIF1Q5UIP0 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-1.9□□□□□ -2.71
RIF1Q5UIP0 MIR5696-201ENST00000578474 85 ntBASIC-1.9□□□□□ -2.71
RIF1Q5UIP0 AP000720.1-201ENST00000625091 483 ntBASIC-1.9□□□□□ -2.71
RIF1Q5UIP0 RNU6-845P-201ENST00000362578 103 ntBASIC-1.9□□□□□ -2.71
RIF1Q5UIP0 PCMTD1P1-201ENST00000455560 355 ntBASIC-1.9□□□□□ -2.71
RIF1Q5UIP0 MTND3P7-201ENST00000474435 343 ntBASIC-1.9□□□□□ -2.71
RIF1Q5UIP0 RNU6-807P-201ENST00000516805 107 ntBASIC-1.9□□□□□ -2.71
RIF1Q5UIP0 MIR3941-201ENST00000582572 103 ntBASIC-1.9□□□□□ -2.71
RIF1Q5UIP0 ZNF92P2-201ENST00000600543 1059 ntBASIC-1.9□□□□□ -2.71
RIF1Q5UIP0 AL512427.1-201ENST00000618593 349 ntBASIC-1.9□□□□□ -2.71
RIF1Q5UIP0 RNA5SP144-201ENST00000410846 116 ntBASIC-1.91□□□□□ -2.71
RIF1Q5UIP0 snoU13.17-201ENST00000458802 104 ntBASIC-1.91□□□□□ -2.71
RIF1Q5UIP0 AC021613.1-201ENST00000623880 111 ntBASIC-1.91□□□□□ -2.71
RIF1Q5UIP0 RNU6-238P-201ENST00000363313 106 ntBASIC-1.91□□□□□ -2.72
RIF1Q5UIP0 RNU6-1303P-201ENST00000364841 107 ntBASIC-1.91□□□□□ -2.72
RIF1Q5UIP0 Y_RNA.310-201ENST00000365063 113 ntBASIC-1.91□□□□□ -2.72
RIF1Q5UIP0 Y_RNA.404-201ENST00000383978 102 ntBASIC-1.91□□□□□ -2.72
RIF1Q5UIP0 MTND4LP7-201ENST00000431728 294 ntBASIC-1.91□□□□□ -2.72
RIF1Q5UIP0 MTND3P23-201ENST00000431980 347 ntBASIC-1.91□□□□□ -2.72
RIF1Q5UIP0 RNU6-62P-201ENST00000516526 102 ntBASIC-1.91□□□□□ -2.72
RIF1Q5UIP0 MTATP6P24-201ENST00000576835 677 ntBASIC-1.91□□□□□ -2.72
RIF1Q5UIP0 AL158211.2-201ENST00000607282 395 ntBASIC-1.91□□□□□ -2.72
RIF1Q5UIP0 uc_338.11-201ENST00000619132 160 ntBASIC-1.91□□□□□ -2.72
RIF1Q5UIP0 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.92□□□□□ -2.72
RIF1Q5UIP0 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.92□□□□□ -2.72
RIF1Q5UIP0 RNU6-974P-201ENST00000384099 108 ntBASIC-1.92□□□□□ -2.72
RIF1Q5UIP0 RNU6-192P-201ENST00000391253 100 ntBASIC-1.92□□□□□ -2.72
RIF1Q5UIP0 RNU2-35P-201ENST00000516446 142 ntBASIC-1.92□□□□□ -2.72
RIF1Q5UIP0 MIR4536-1-201ENST00000583537 88 ntBASIC-1.92□□□□□ -2.72
RIF1Q5UIP0 U6.81-201ENST00000612550 106 ntBASIC-1.92□□□□□ -2.72
RIF1Q5UIP0 AC073534.2-201ENST00000620377 381 ntBASIC-1.92□□□□□ -2.72
RIF1Q5UIP0 MIR4773-1-201ENST00000637203 78 ntBASIC-1.92□□□□□ -2.72
RIF1Q5UIP0 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.92□□□□□ -2.72
RIF1Q5UIP0 Y_RNA.242-201ENST00000364473 110 ntBASIC-1.92□□□□□ -2.72
RIF1Q5UIP0 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-1.92□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms