Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.38□□□□□ -2.19
SF3B3Q15393 uc_338.6-201ENST00000613544 171 ntBASIC1.38□□□□□ -2.19
SF3B3Q15393 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
SF3B3Q15393 RNU6-905P-201ENST00000384434 107 ntBASIC1.37□□□□□ -2.19
SF3B3Q15393 MIR618-201ENST00000385287 98 ntBASIC1.37□□□□□ -2.19
SF3B3Q15393 RNU6-1321P-201ENST00000390905 107 ntBASIC1.37□□□□□ -2.19
SF3B3Q15393 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.37□□□□□ -2.19
SF3B3Q15393 RNU6-1165P-201ENST00000410119 107 ntBASIC1.37□□□□□ -2.19
SF3B3Q15393 Y_RNA.601-201ENST00000410500 113 ntBASIC1.37□□□□□ -2.19
SF3B3Q15393 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.37□□□□□ -2.19
SF3B3Q15393 SNORA31.2-201ENST00000516019 134 ntBASIC1.37□□□□□ -2.19
SF3B3Q15393 SEPT14P17-201ENST00000617978 177 ntBASIC1.37□□□□□ -2.19
SF3B3Q15393 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.37□□□□□ -2.19
SF3B3Q15393 RNU6-640P-201ENST00000363693 105 ntBASIC1.36□□□□□ -2.19
SF3B3Q15393 RNU6-42P-201ENST00000384165 107 ntBASIC1.36□□□□□ -2.19
SF3B3Q15393 Y_RNA.448-201ENST00000384185 108 ntBASIC1.36□□□□□ -2.19
SF3B3Q15393 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.36□□□□□ -2.19
SF3B3Q15393 RNU6-447P-201ENST00000410293 104 ntBASIC1.36□□□□□ -2.19
SF3B3Q15393 RNA5SP95-201ENST00000410319 137 ntBASIC1.36□□□□□ -2.19
SF3B3Q15393 RNU6-1118P-201ENST00000410382 104 ntBASIC1.36□□□□□ -2.19
SF3B3Q15393 RNU6-1076P-201ENST00000410397 104 ntBASIC1.36□□□□□ -2.19
SF3B3Q15393 RNU6-355P-201ENST00000410427 104 ntBASIC1.36□□□□□ -2.19
SF3B3Q15393 RNU6-791P-201ENST00000410467 104 ntBASIC1.36□□□□□ -2.19
SF3B3Q15393 RNU6-705P-201ENST00000410601 104 ntBASIC1.36□□□□□ -2.19
SF3B3Q15393 RNU6-1100P-201ENST00000410691 104 ntBASIC1.36□□□□□ -2.19
SF3B3Q15393 RNU6-860P-201ENST00000410860 104 ntBASIC1.36□□□□□ -2.19
SF3B3Q15393 RNU6-1217P-201ENST00000411276 104 ntBASIC1.36□□□□□ -2.19
SF3B3Q15393 RNU6-785P-201ENST00000411324 104 ntBASIC1.36□□□□□ -2.19
SF3B3Q15393 UBL5P1-201ENST00000507979 193 ntBASIC1.36□□□□□ -2.19
SF3B3Q15393 RNA5SP220-201ENST00000516298 104 ntBASIC1.36□□□□□ -2.19
SF3B3Q15393 RNU6-158P-201ENST00000517104 100 ntBASIC1.36□□□□□ -2.19
SF3B3Q15393 U6.90-201ENST00000614007 104 ntBASIC1.36□□□□□ -2.19
SF3B3Q15393 AC105081.1-201ENST00000617727 106 ntBASIC1.36□□□□□ -2.19
SF3B3Q15393 U6.70-201ENST00000620287 104 ntBASIC1.36□□□□□ -2.19
SF3B3Q15393 AL512310.12-203ENST00000640543 90 ntBASIC1.36□□□□□ -2.19
SF3B3Q15393 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.36□□□□□ -2.19
SF3B3Q15393 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SF3B3Q15393 Y_RNA.10-201ENST00000362371 110 ntBASIC1.35□□□□□ -2.19
SF3B3Q15393 Y_RNA.168-201ENST00000363740 102 ntBASIC1.35□□□□□ -2.19
SF3B3Q15393 Y_RNA.363-201ENST00000365529 113 ntBASIC1.35□□□□□ -2.19
SF3B3Q15393 SNORA75.2-201ENST00000391138 150 ntBASIC1.35□□□□□ -2.19
SF3B3Q15393 SNORA75.3-201ENST00000391231 150 ntBASIC1.35□□□□□ -2.19
SF3B3Q15393 AL591704.2-201ENST00000421658 181 ntBASIC1.35□□□□□ -2.19
SF3B3Q15393 SCARNA23-201ENST00000516060 130 ntBASIC1.35□□□□□ -2.19
SF3B3Q15393 RNU6-1006P-201ENST00000516998 103 ntBASIC1.35□□□□□ -2.19
SF3B3Q15393 AL442128.1-201ENST00000615151 90 ntBASIC1.35□□□□□ -2.19
SF3B3Q15393 Y_RNA.466-201ENST00000384294 113 ntBASIC1.34□□□□□ -2.19
SF3B3Q15393 MIR34C-201ENST00000384831 77 ntBASIC1.34□□□□□ -2.19
SF3B3Q15393 MT-TF-201ENST00000387314 71 ntBASIC1.34□□□□□ -2.19
SF3B3Q15393 RNU7-48P-201ENST00000458875 63 ntBASIC1.34□□□□□ -2.19
SF3B3Q15393 Y_RNA.694-201ENST00000516677 117 ntBASIC1.34□□□□□ -2.19
SF3B3Q15393 RNA5SP170-201ENST00000517150 101 ntBASIC1.34□□□□□ -2.19
SF3B3Q15393 MIR376B-201ENST00000614515 100 ntBASIC1.34□□□□□ -2.19
SF3B3Q15393 AC022709.1-201ENST00000615967 87 ntBASIC1.34□□□□□ -2.19
SF3B3Q15393 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SF3B3Q15393 MIR373-201ENST00000362273 69 ntBASIC1.33□□□□□ -2.2
SF3B3Q15393 Y_RNA.93-201ENST00000363066 109 ntBASIC1.33□□□□□ -2.2
SF3B3Q15393 AC096949.1-201ENST00000412047 152 ntBASIC1.33□□□□□ -2.2
SF3B3Q15393 RPS29P1-201ENST00000465274 159 ntBASIC1.33□□□□□ -2.2
SF3B3Q15393 SNORA40.13-201ENST00000516379 120 ntBASIC1.33□□□□□ -2.2
SF3B3Q15393 AL078603.1-201ENST00000603824 313 ntBASIC1.33□□□□□ -2.2
SF3B3Q15393 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.32□□□□□ -2.2
SF3B3Q15393 RNA5SP327-201ENST00000362494 101 ntBASIC1.32□□□□□ -2.2
SF3B3Q15393 Y_RNA.98-201ENST00000363109 102 ntBASIC1.32□□□□□ -2.2
SF3B3Q15393 Y_RNA.107-201ENST00000363190 121 ntBASIC1.32□□□□□ -2.2
SF3B3Q15393 Y_RNA.247-201ENST00000364500 92 ntBASIC1.32□□□□□ -2.2
SF3B3Q15393 RNU6-865P-201ENST00000364772 107 ntBASIC1.32□□□□□ -2.2
SF3B3Q15393 U8.15-201ENST00000390947 134 ntBASIC1.32□□□□□ -2.2
SF3B3Q15393 MTATP8P2-201ENST00000435212 202 ntBASIC1.32□□□□□ -2.2
SF3B3Q15393 AC036111.3-201ENST00000526389 112 ntBASIC1.32□□□□□ -2.2
SF3B3Q15393 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
SF3B3Q15393 RNU6-170P-201ENST00000362832 104 ntBASIC1.31□□□□□ -2.2
SF3B3Q15393 MIR18B-201ENST00000454574 71 ntBASIC1.31□□□□□ -2.2
SF3B3Q15393 SNORD114-21-201ENST00000606412 72 ntBASIC1.31□□□□□ -2.2
SF3B3Q15393 AC012531.4-201ENST00000616509 177 ntBASIC1.31□□□□□ -2.2
SF3B3Q15393 MIR6788-201ENST00000618842 66 ntBASIC1.31□□□□□ -2.2
SF3B3Q15393 AC012676.2-201ENST00000619258 186 ntBASIC1.31□□□□□ -2.2
SF3B3Q15393 AC091304.10-201ENST00000641554 121 ntBASIC1.31□□□□□ -2.2
SF3B3Q15393 Y_RNA.43-201ENST00000362670 111 ntBASIC1.3□□□□□ -2.2
SF3B3Q15393 SNORD38.1-201ENST00000363863 68 ntBASIC1.3□□□□□ -2.2
SF3B3Q15393 SNORD113.3-201ENST00000364630 78 ntBASIC1.3□□□□□ -2.2
SF3B3Q15393 RNY1P2-201ENST00000364820 117 ntBASIC1.3□□□□□ -2.2
SF3B3Q15393 Y_RNA.330-201ENST00000365230 109 ntBASIC1.3□□□□□ -2.2
SF3B3Q15393 SNORA2B-201ENST00000384583 137 ntBASIC1.3□□□□□ -2.2
SF3B3Q15393 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
SF3B3Q15393 RNU6-910P-201ENST00000390844 107 ntBASIC1.3□□□□□ -2.2
SF3B3Q15393 RNU7-21P-201ENST00000459430 62 ntBASIC1.3□□□□□ -2.2
SF3B3Q15393 OR2A41P-201ENST00000473586 105 ntBASIC1.3□□□□□ -2.2
SF3B3Q15393 RNU6-795P-201ENST00000516323 103 ntBASIC1.3□□□□□ -2.2
SF3B3Q15393 AC133485.1-201ENST00000567176 124 ntBASIC1.3□□□□□ -2.2
SF3B3Q15393 AP001362.1-201ENST00000625165 124 ntBASIC1.3□□□□□ -2.2
SF3B3Q15393 SNORD45B-201ENST00000364617 72 ntBASIC1.29□□□□□ -2.2
SF3B3Q15393 SNORA80D-201ENST00000384488 135 ntBASIC1.29□□□□□ -2.2
SF3B3Q15393 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.29□□□□□ -2.2
SF3B3Q15393 AC004941.2-201ENST00000427009 228 ntBASIC1.29□□□□□ -2.2
SF3B3Q15393 RPS29P28-201ENST00000446439 141 ntBASIC1.29□□□□□ -2.2
SF3B3Q15393 snoU13.21-201ENST00000459368 105 ntBASIC1.29□□□□□ -2.2
SF3B3Q15393 SNORD79.1-201ENST00000516069 84 ntBASIC1.29□□□□□ -2.2
SF3B3Q15393 RNU7-40P-201ENST00000516397 64 ntBASIC1.29□□□□□ -2.2
SF3B3Q15393 AC138749.4-201ENST00000563970 127 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms