Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 MIR30D-201ENST00000362283 70 ntBASIC0.53□□□□□ -2.32
PTCH1Q13635 RNU6-774P-201ENST00000363238 107 ntBASIC0.53□□□□□ -2.32
PTCH1Q13635 Y_RNA.470-201ENST00000384307 117 ntBASIC0.53□□□□□ -2.32
PTCH1Q13635 RNU6-1237P-201ENST00000384777 107 ntBASIC0.53□□□□□ -2.32
PTCH1Q13635 SNORA40-201ENST00000388090 126 ntBASIC0.53□□□□□ -2.32
PTCH1Q13635 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.53□□□□□ -2.32
PTCH1Q13635 RNU6-1165P-201ENST00000410119 107 ntBASIC0.53□□□□□ -2.32
PTCH1Q13635 RNU6-257P-201ENST00000410238 98 ntBASIC0.53□□□□□ -2.32
PTCH1Q13635 SNRPGP12-201ENST00000449481 213 ntBASIC0.53□□□□□ -2.32
PTCH1Q13635 RNU7-113P-201ENST00000459273 62 ntBASIC0.53□□□□□ -2.32
PTCH1Q13635 RNU5E-3P-201ENST00000515913 68 ntBASIC0.53□□□□□ -2.32
PTCH1Q13635 U7.2-201ENST00000607576 63 ntBASIC0.53□□□□□ -2.32
PTCH1Q13635 MIR6718-201ENST00000616153 80 ntBASIC0.53□□□□□ -2.32
PTCH1Q13635 RNU6-369P-201ENST00000362515 102 ntBASIC0.52□□□□□ -2.33
PTCH1Q13635 RNU6-647P-201ENST00000364243 107 ntBASIC0.52□□□□□ -2.33
PTCH1Q13635 Y_RNA.298-201ENST00000364960 107 ntBASIC0.52□□□□□ -2.33
PTCH1Q13635 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
PTCH1Q13635 RNU1-119P-201ENST00000391122 165 ntBASIC0.52□□□□□ -2.33
PTCH1Q13635 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.52□□□□□ -2.33
PTCH1Q13635 RNU6-1086P-201ENST00000410930 100 ntBASIC0.52□□□□□ -2.33
PTCH1Q13635 AL158147.1-201ENST00000443970 75 ntBASIC0.52□□□□□ -2.33
PTCH1Q13635 RNU7-164P-201ENST00000459221 62 ntBASIC0.52□□□□□ -2.33
PTCH1Q13635 RN7SKP19-201ENST00000516016 252 ntBASIC0.52□□□□□ -2.33
PTCH1Q13635 RNA5SP33-201ENST00000516687 98 ntBASIC0.52□□□□□ -2.33
PTCH1Q13635 IGKV1-22-201ENST00000524313 326 ntBASIC0.52□□□□□ -2.33
PTCH1Q13635 MTRNR2L2-201ENST00000604882 87 ntBASIC0.52□□□□□ -2.33
PTCH1Q13635 AL662814.1-201ENST00000617364 121 ntBASIC0.52□□□□□ -2.33
PTCH1Q13635 MIR1-1-201ENST00000362147 71 ntBASIC0.51□□□□□ -2.33
PTCH1Q13635 SNORA18-201ENST00000384416 132 ntBASIC0.51□□□□□ -2.33
PTCH1Q13635 MT-TF-201ENST00000387314 71 ntBASIC0.51□□□□□ -2.33
PTCH1Q13635 Y_RNA.586-201ENST00000391146 98 ntBASIC0.51□□□□□ -2.33
PTCH1Q13635 MIR548M-201ENST00000408260 86 ntBASIC0.51□□□□□ -2.33
PTCH1Q13635 MIR1827-201ENST00000408549 66 ntBASIC0.51□□□□□ -2.33
PTCH1Q13635 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.51□□□□□ -2.33
PTCH1Q13635 MIR1468-201ENST00000410600 86 ntBASIC0.51□□□□□ -2.33
PTCH1Q13635 Y_RNA.617-201ENST00000410920 90 ntBASIC0.51□□□□□ -2.33
PTCH1Q13635 SNORD83.1-201ENST00000411362 77 ntBASIC0.51□□□□□ -2.33
PTCH1Q13635 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.51□□□□□ -2.33
PTCH1Q13635 RNU7-123P-201ENST00000515911 60 ntBASIC0.51□□□□□ -2.33
PTCH1Q13635 RNU7-79P-201ENST00000516082 62 ntBASIC0.51□□□□□ -2.33
PTCH1Q13635 RNU7-35P-201ENST00000517174 62 ntBASIC0.51□□□□□ -2.33
PTCH1Q13635 AC141846.1-201ENST00000568348 142 ntBASIC0.51□□□□□ -2.33
PTCH1Q13635 AC011195.1-201ENST00000578177 177 ntBASIC0.51□□□□□ -2.33
PTCH1Q13635 AC020891.4-201ENST00000605745 93 ntBASIC0.51□□□□□ -2.33
PTCH1Q13635 uc_338.17-201ENST00000619633 179 ntBASIC0.51□□□□□ -2.33
PTCH1Q13635 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.51□□□□□ -2.33
PTCH1Q13635 RNU6-704P-201ENST00000364162 103 ntBASIC0.5□□□□□ -2.33
PTCH1Q13635 Y_RNA.299-201ENST00000364973 94 ntBASIC0.5□□□□□ -2.33
PTCH1Q13635 RNU6-187P-201ENST00000384139 106 ntBASIC0.5□□□□□ -2.33
PTCH1Q13635 Y_RNA.457-201ENST00000384237 111 ntBASIC0.5□□□□□ -2.33
PTCH1Q13635 RNU6-1104P-201ENST00000384723 104 ntBASIC0.5□□□□□ -2.33
PTCH1Q13635 RNA5SP237-201ENST00000410414 113 ntBASIC0.5□□□□□ -2.33
PTCH1Q13635 RNY1P13-201ENST00000365030 105 ntBASIC0.49□□□□□ -2.33
PTCH1Q13635 MIR539-201ENST00000365690 78 ntBASIC0.49□□□□□ -2.33
PTCH1Q13635 RNU6-949P-201ENST00000384040 107 ntBASIC0.49□□□□□ -2.33
PTCH1Q13635 U8.15-201ENST00000390947 134 ntBASIC0.49□□□□□ -2.33
PTCH1Q13635 RNU7-56P-201ENST00000458744 62 ntBASIC0.49□□□□□ -2.33
PTCH1Q13635 RNU7-185P-201ENST00000459215 60 ntBASIC0.49□□□□□ -2.33
PTCH1Q13635 RNY4P20-201ENST00000516678 93 ntBASIC0.49□□□□□ -2.33
PTCH1Q13635 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.49□□□□□ -2.33
PTCH1Q13635 IGLVI-20-201ENST00000519296 130 ntBASIC0.49□□□□□ -2.33
PTCH1Q13635 MIR4771-2-201ENST00000577758 74 ntBASIC0.49□□□□□ -2.33
PTCH1Q13635 MIR4804-201ENST00000581683 73 ntBASIC0.49□□□□□ -2.33
PTCH1Q13635 MIR4771-1-201ENST00000582617 74 ntBASIC0.49□□□□□ -2.33
PTCH1Q13635 MIR4676-201ENST00000583078 72 ntBASIC0.49□□□□□ -2.33
PTCH1Q13635 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.49□□□□□ -2.33
PTCH1Q13635 Y_RNA.185-201ENST00000363894 100 ntBASIC0.48□□□□□ -2.33
PTCH1Q13635 MIR125B2-201ENST00000385128 89 ntBASIC0.48□□□□□ -2.33
PTCH1Q13635 RNU4-69P-201ENST00000410677 143 ntBASIC0.48□□□□□ -2.33
PTCH1Q13635 RNA5SP136-201ENST00000410906 107 ntBASIC0.48□□□□□ -2.33
PTCH1Q13635 RNA5SP222-201ENST00000411039 105 ntBASIC0.48□□□□□ -2.33
PTCH1Q13635 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.48□□□□□ -2.33
PTCH1Q13635 RNU6-1211P-201ENST00000459179 105 ntBASIC0.48□□□□□ -2.33
PTCH1Q13635 MIR548AE2-201ENST00000583456 67 ntBASIC0.48□□□□□ -2.33
PTCH1Q13635 RNU6-235P-201ENST00000362644 107 ntBASIC0.47□□□□□ -2.33
PTCH1Q13635 RNU6-945P-201ENST00000383947 107 ntBASIC0.47□□□□□ -2.33
PTCH1Q13635 MIRLET7F2-201ENST00000385277 83 ntBASIC0.47□□□□□ -2.33
PTCH1Q13635 SNORD105-201ENST00000386910 85 ntBASIC0.47□□□□□ -2.33
PTCH1Q13635 SNORD93-201ENST00000408813 74 ntBASIC0.47□□□□□ -2.33
PTCH1Q13635 AC096949.1-201ENST00000412047 152 ntBASIC0.47□□□□□ -2.33
PTCH1Q13635 AC015818.7-201ENST00000428754 109 ntBASIC0.47□□□□□ -2.33
PTCH1Q13635 AC087499.7-201ENST00000441958 109 ntBASIC0.47□□□□□ -2.33
PTCH1Q13635 MIR1270-201ENST00000459320 83 ntBASIC0.47□□□□□ -2.33
PTCH1Q13635 RNU6-977P-201ENST00000516411 103 ntBASIC0.47□□□□□ -2.33
PTCH1Q13635 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
PTCH1Q13635 Y_RNA.198-201ENST00000364013 98 ntBASIC0.47□□□□□ -2.33
PTCH1Q13635 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
PTCH1Q13635 SNORA36.2-201ENST00000384004 127 ntBASIC0.47□□□□□ -2.33
PTCH1Q13635 SNORA32-201ENST00000384072 121 ntBASIC0.47□□□□□ -2.33
PTCH1Q13635 MT-TI-201ENST00000387365 69 ntBASIC0.47□□□□□ -2.33
PTCH1Q13635 MIR938-201ENST00000401216 83 ntBASIC0.47□□□□□ -2.33
PTCH1Q13635 MIR1263-201ENST00000408324 86 ntBASIC0.47□□□□□ -2.33
PTCH1Q13635 AC244098.3-201ENST00000424803 96 ntBASIC0.47□□□□□ -2.33
PTCH1Q13635 SUMO1P3-201ENST00000439961 304 ntBASIC0.47□□□□□ -2.33
PTCH1Q13635 snoU13.11-201ENST00000459219 104 ntBASIC0.47□□□□□ -2.33
PTCH1Q13635 AC104692.1-201ENST00000472406 90 ntBASIC0.47□□□□□ -2.33
PTCH1Q13635 RNU6-781P-201ENST00000516377 101 ntBASIC0.47□□□□□ -2.33
PTCH1Q13635 RNU6-971P-201ENST00000516920 106 ntBASIC0.47□□□□□ -2.33
PTCH1Q13635 RNU7-156P-201ENST00000517214 74 ntBASIC0.47□□□□□ -2.33
PTCH1Q13635 AC022523.2-201ENST00000561045 150 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 2394.5 ms