Protein–RNA interactions for Protein: Q12805

EFEMP1, EGF-containing fibulin-like extracellular matrix protein 1, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1Q12805 MIR4251-201ENST00000635819 61 ntBASIC1.87□□□□□ -2.11
EFEMP1Q12805 U6.111-201ENST00000636093 83 ntBASIC1.87□□□□□ -2.11
EFEMP1Q12805 RNU5F-1-201ENST00000362507 117 ntBASIC1.86□□□□□ -2.11
EFEMP1Q12805 RNA5SP99-201ENST00000364020 114 ntBASIC1.86□□□□□ -2.11
EFEMP1Q12805 RNU6-571P-201ENST00000384128 107 ntBASIC1.86□□□□□ -2.11
EFEMP1Q12805 Y_RNA.491-201ENST00000384417 107 ntBASIC1.86□□□□□ -2.11
EFEMP1Q12805 MTND4LP19-201ENST00000403051 166 ntBASIC1.86□□□□□ -2.11
EFEMP1Q12805 snoU13.27-201ENST00000459278 104 ntBASIC1.86□□□□□ -2.11
EFEMP1Q12805 RNU6-75P-201ENST00000515944 104 ntBASIC1.86□□□□□ -2.11
EFEMP1Q12805 SUB1P4-201ENST00000566062 339 ntBASIC1.86□□□□□ -2.11
EFEMP1Q12805 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
EFEMP1Q12805 MIRLET7F1-201ENST00000362202 87 ntBASIC1.85□□□□□ -2.11
EFEMP1Q12805 MIR424-201ENST00000362227 98 ntBASIC1.85□□□□□ -2.11
EFEMP1Q12805 Y_RNA.283-201ENST00000364798 112 ntBASIC1.85□□□□□ -2.11
EFEMP1Q12805 RNU6-1241P-201ENST00000384536 107 ntBASIC1.85□□□□□ -2.11
EFEMP1Q12805 RNU6-987P-201ENST00000384759 104 ntBASIC1.85□□□□□ -2.11
EFEMP1Q12805 MIR516A2-201ENST00000384888 90 ntBASIC1.85□□□□□ -2.11
EFEMP1Q12805 MIR516A1-201ENST00000385033 90 ntBASIC1.85□□□□□ -2.11
EFEMP1Q12805 MIR154-201ENST00000385243 84 ntBASIC1.85□□□□□ -2.11
EFEMP1Q12805 SNORD90-201ENST00000391145 111 ntBASIC1.85□□□□□ -2.11
EFEMP1Q12805 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.85□□□□□ -2.11
EFEMP1Q12805 RNU6-303P-201ENST00000517091 106 ntBASIC1.85□□□□□ -2.11
EFEMP1Q12805 MIR4419B-201ENST00000577260 68 ntBASIC1.85□□□□□ -2.11
EFEMP1Q12805 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.85□□□□□ -2.11
EFEMP1Q12805 AC245884.12-201ENST00000615364 59 ntBASIC1.85□□□□□ -2.11
EFEMP1Q12805 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
EFEMP1Q12805 Y_RNA.119-201ENST00000363301 96 ntBASIC1.84□□□□□ -2.11
EFEMP1Q12805 Y_RNA.264-201ENST00000364665 102 ntBASIC1.84□□□□□ -2.11
EFEMP1Q12805 SNORD115-31-201ENST00000365318 82 ntBASIC1.84□□□□□ -2.11
EFEMP1Q12805 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
EFEMP1Q12805 RNA5SP465-201ENST00000391195 109 ntBASIC1.84□□□□□ -2.11
EFEMP1Q12805 RNA5SP501-201ENST00000410990 112 ntBASIC1.84□□□□□ -2.11
EFEMP1Q12805 AC074348.1-201ENST00000426503 132 ntBASIC1.84□□□□□ -2.11
EFEMP1Q12805 RNU7-41P-201ENST00000515917 61 ntBASIC1.84□□□□□ -2.11
EFEMP1Q12805 MIR4529-201ENST00000578110 78 ntBASIC1.84□□□□□ -2.11
EFEMP1Q12805 MIR3935-201ENST00000583472 104 ntBASIC1.84□□□□□ -2.11
EFEMP1Q12805 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.84□□□□□ -2.11
EFEMP1Q12805 WWP1P1-201ENST00000466609 2769 ntBASIC1.84□□□□□ -2.12
EFEMP1Q12805 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
EFEMP1Q12805 Y_RNA.12-201ENST00000362393 112 ntBASIC1.83□□□□□ -2.12
EFEMP1Q12805 SNORD36A-201ENST00000362874 73 ntBASIC1.83□□□□□ -2.12
EFEMP1Q12805 MIR548U-201ENST00000390728 81 ntBASIC1.83□□□□□ -2.12
EFEMP1Q12805 RNU6-663P-201ENST00000391105 106 ntBASIC1.83□□□□□ -2.12
EFEMP1Q12805 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
EFEMP1Q12805 RNU4-37P-201ENST00000410214 84 ntBASIC1.83□□□□□ -2.12
EFEMP1Q12805 SNORA25.15-201ENST00000516487 89 ntBASIC1.83□□□□□ -2.12
EFEMP1Q12805 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.83□□□□□ -2.12
EFEMP1Q12805 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
EFEMP1Q12805 RNU6-112P-201ENST00000363599 104 ntBASIC1.82□□□□□ -2.12
EFEMP1Q12805 SNORA3A-201ENST00000364113 130 ntBASIC1.82□□□□□ -2.12
EFEMP1Q12805 RNU6-296P-201ENST00000384608 107 ntBASIC1.82□□□□□ -2.12
EFEMP1Q12805 SNORA48.1-201ENST00000390879 135 ntBASIC1.82□□□□□ -2.12
EFEMP1Q12805 RNU6-243P-201ENST00000391140 107 ntBASIC1.82□□□□□ -2.12
EFEMP1Q12805 RNU6-466P-201ENST00000391224 103 ntBASIC1.82□□□□□ -2.12
EFEMP1Q12805 RNU6-1254P-201ENST00000391266 104 ntBASIC1.82□□□□□ -2.12
EFEMP1Q12805 RNA5SP489-201ENST00000410986 109 ntBASIC1.82□□□□□ -2.12
EFEMP1Q12805 AC009474.2-201ENST00000451383 136 ntBASIC1.82□□□□□ -2.12
EFEMP1Q12805 RNA5SP364-201ENST00000516938 78 ntBASIC1.82□□□□□ -2.12
EFEMP1Q12805 RNU6-250P-201ENST00000516958 103 ntBASIC1.82□□□□□ -2.12
EFEMP1Q12805 AC121758.2-201ENST00000553271 193 ntBASIC1.82□□□□□ -2.12
EFEMP1Q12805 SNORD92-201ENST00000585078 85 ntBASIC1.82□□□□□ -2.12
EFEMP1Q12805 U1.36-201ENST00000620684 176 ntBASIC1.82□□□□□ -2.12
EFEMP1Q12805 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
EFEMP1Q12805 RNU6-330P-201ENST00000363015 107 ntBASIC1.81□□□□□ -2.12
EFEMP1Q12805 RNU1-17P-201ENST00000363022 152 ntBASIC1.81□□□□□ -2.12
EFEMP1Q12805 SNORA8.1-201ENST00000384250 140 ntBASIC1.81□□□□□ -2.12
EFEMP1Q12805 MIR588-201ENST00000384900 83 ntBASIC1.81□□□□□ -2.12
EFEMP1Q12805 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
EFEMP1Q12805 SUMO2P12-201ENST00000405924 140 ntBASIC1.81□□□□□ -2.12
EFEMP1Q12805 AC244023.1-201ENST00000426884 112 ntBASIC1.81□□□□□ -2.12
EFEMP1Q12805 snoU13.2-201ENST00000459201 104 ntBASIC1.81□□□□□ -2.12
EFEMP1Q12805 RNA5SP481-201ENST00000516814 122 ntBASIC1.81□□□□□ -2.12
EFEMP1Q12805 RNU7-156P-201ENST00000517214 74 ntBASIC1.81□□□□□ -2.12
EFEMP1Q12805 AL357312.1-201ENST00000603879 298 ntBASIC1.81□□□□□ -2.12
EFEMP1Q12805 AC242498.1-201ENST00000604134 111 ntBASIC1.81□□□□□ -2.12
EFEMP1Q12805 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
EFEMP1Q12805 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
EFEMP1Q12805 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
EFEMP1Q12805 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
EFEMP1Q12805 RNU6-471P-201ENST00000383944 106 ntBASIC1.8□□□□□ -2.12
EFEMP1Q12805 MIR9-2-201ENST00000384838 87 ntBASIC1.8□□□□□ -2.12
EFEMP1Q12805 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.8□□□□□ -2.12
EFEMP1Q12805 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.79□□□□□ -2.12
EFEMP1Q12805 RNU6-957P-201ENST00000363652 99 ntBASIC1.79□□□□□ -2.12
EFEMP1Q12805 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
EFEMP1Q12805 AC245517.4-201ENST00000448601 281 ntBASIC1.79□□□□□ -2.12
EFEMP1Q12805 RNU7-106P-201ENST00000459514 67 ntBASIC1.79□□□□□ -2.12
EFEMP1Q12805 RNU7-193P-201ENST00000516723 65 ntBASIC1.79□□□□□ -2.12
EFEMP1Q12805 SNORA31.25-201ENST00000517242 134 ntBASIC1.79□□□□□ -2.12
EFEMP1Q12805 YWHAEP2-201ENST00000580066 112 ntBASIC1.79□□□□□ -2.12
EFEMP1Q12805 YWHAEP3-201ENST00000582767 121 ntBASIC1.79□□□□□ -2.12
EFEMP1Q12805 SNORA4-201ENST00000584302 138 ntBASIC1.79□□□□□ -2.12
EFEMP1Q12805 AL096861.1-201ENST00000610899 123 ntBASIC1.79□□□□□ -2.12
EFEMP1Q12805 RNA5SP190-201ENST00000365222 118 ntBASIC1.78□□□□□ -2.12
EFEMP1Q12805 SNORA6-201ENST00000384033 151 ntBASIC1.78□□□□□ -2.12
EFEMP1Q12805 HMGN2P19-201ENST00000425149 265 ntBASIC1.78□□□□□ -2.12
EFEMP1Q12805 AC093423.1-201ENST00000440817 142 ntBASIC1.78□□□□□ -2.12
EFEMP1Q12805 snoU13.17-201ENST00000458802 104 ntBASIC1.78□□□□□ -2.12
EFEMP1Q12805 SNORD13-201ENST00000459299 104 ntBASIC1.78□□□□□ -2.12
EFEMP1Q12805 AC005520.4-201ENST00000604337 90 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 151.2 ms