Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 SNORA25.13-201ENST00000516395 103 ntBASIC2.03□□□□□ -2.08
SOX4Q06945 MIR4448-201ENST00000584360 86 ntBASIC2.03□□□□□ -2.08
SOX4Q06945 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
SOX4Q06945 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
SOX4Q06945 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
SOX4Q06945 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.02□□□□□ -2.09
SOX4Q06945 MIR889-201ENST00000401280 79 ntBASIC2.02□□□□□ -2.09
SOX4Q06945 AC244636.1-201ENST00000421152 228 ntBASIC2.02□□□□□ -2.09
SOX4Q06945 RNU7-85P-201ENST00000458851 63 ntBASIC2.02□□□□□ -2.09
SOX4Q06945 AC023790.1-201ENST00000482174 347 ntBASIC2.02□□□□□ -2.09
SOX4Q06945 RNU6-237P-201ENST00000515985 71 ntBASIC2.02□□□□□ -2.09
SOX4Q06945 uc_338.6-201ENST00000613544 171 ntBASIC2.02□□□□□ -2.09
SOX4Q06945 AC008163.1-202ENST00000636004 2889 ntBASIC2.02□□□□□ -2.09
SOX4Q06945 AL359851.1-201ENST00000569460 4997 ntBASIC2.02□□□□□ -2.09
SOX4Q06945 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
SOX4Q06945 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SOX4Q06945 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.01□□□□□ -2.09
SOX4Q06945 AL356379.1-201ENST00000414105 126 ntBASIC2.01□□□□□ -2.09
SOX4Q06945 AC245517.4-201ENST00000448601 281 ntBASIC2.01□□□□□ -2.09
SOX4Q06945 Y_RNA.648-201ENST00000459455 110 ntBASIC2.01□□□□□ -2.09
SOX4Q06945 RPL30P7-201ENST00000479312 323 ntBASIC2.01□□□□□ -2.09
SOX4Q06945 AP003716.2-201ENST00000528260 108 ntBASIC2.01□□□□□ -2.09
SOX4Q06945 MIR8074-201ENST00000615081 81 ntBASIC2.01□□□□□ -2.09
SOX4Q06945 MIR6516-201ENST00000630554 81 ntBASIC2.01□□□□□ -2.09
SOX4Q06945 MT-TF-201ENST00000387314 71 ntBASIC2□□□□□ -2.09
SOX4Q06945 MIR1185-1-201ENST00000408598 86 ntBASIC2□□□□□ -2.09
SOX4Q06945 AC073261.1-201ENST00000429409 121 ntBASIC2□□□□□ -2.09
SOX4Q06945 RNU1-40P-201ENST00000516816 164 ntBASIC2□□□□□ -2.09
SOX4Q06945 RNU1-97P-201ENST00000516872 164 ntBASIC2□□□□□ -2.09
SOX4Q06945 RNU11-2P-201ENST00000516898 142 ntBASIC2□□□□□ -2.09
SOX4Q06945 AL627230.6-201ENST00000611129 280 ntBASIC2□□□□□ -2.09
SOX4Q06945 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
SOX4Q06945 RNU6-129P-201ENST00000391022 107 ntBASIC1.99□□□□□ -2.09
SOX4Q06945 RNU6-548P-201ENST00000517083 115 ntBASIC1.99□□□□□ -2.09
SOX4Q06945 MIR4713-201ENST00000582691 75 ntBASIC1.99□□□□□ -2.09
SOX4Q06945 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.99□□□□□ -2.09
SOX4Q06945 RNU6-315P-201ENST00000362666 107 ntBASIC1.98□□□□□ -2.09
SOX4Q06945 RNA5SP264-201ENST00000363115 107 ntBASIC1.98□□□□□ -2.09
SOX4Q06945 Y_RNA.508-201ENST00000384502 114 ntBASIC1.98□□□□□ -2.09
SOX4Q06945 SNORA72.6-201ENST00000384520 129 ntBASIC1.98□□□□□ -2.09
SOX4Q06945 MIR516A2-201ENST00000384888 90 ntBASIC1.98□□□□□ -2.09
SOX4Q06945 MIR516A1-201ENST00000385033 90 ntBASIC1.98□□□□□ -2.09
SOX4Q06945 MIR676-201ENST00000390702 67 ntBASIC1.98□□□□□ -2.09
SOX4Q06945 MIR377-201ENST00000362145 69 ntBASIC1.97□□□□□ -2.09
SOX4Q06945 MIR103A2-201ENST00000362154 78 ntBASIC1.97□□□□□ -2.09
SOX4Q06945 SNORD36A-201ENST00000362874 73 ntBASIC1.97□□□□□ -2.09
SOX4Q06945 RNU6-624P-201ENST00000363411 107 ntBASIC1.97□□□□□ -2.09
SOX4Q06945 RNU6-654P-201ENST00000364373 107 ntBASIC1.97□□□□□ -2.09
SOX4Q06945 snoU13.11-201ENST00000459219 104 ntBASIC1.97□□□□□ -2.09
SOX4Q06945 AC005908.1-201ENST00000468701 347 ntBASIC1.97□□□□□ -2.09
SOX4Q06945 MIR4491-201ENST00000581087 68 ntBASIC1.97□□□□□ -2.09
SOX4Q06945 MIR8063-201ENST00000621930 81 ntBASIC1.97□□□□□ -2.09
SOX4Q06945 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
SOX4Q06945 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.96□□□□□ -2.1
SOX4Q06945 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SOX4Q06945 RNU1-17P-201ENST00000363022 152 ntBASIC1.96□□□□□ -2.1
SOX4Q06945 RNU6-478P-201ENST00000363904 110 ntBASIC1.96□□□□□ -2.1
SOX4Q06945 RNU6-1254P-201ENST00000391266 104 ntBASIC1.96□□□□□ -2.1
SOX4Q06945 RNA5SP95-201ENST00000410319 137 ntBASIC1.96□□□□□ -2.1
SOX4Q06945 HMGN2P19-201ENST00000425149 265 ntBASIC1.96□□□□□ -2.1
SOX4Q06945 AL450471.1-201ENST00000447509 127 ntBASIC1.96□□□□□ -2.1
SOX4Q06945 RNU6-531P-201ENST00000516694 104 ntBASIC1.96□□□□□ -2.1
SOX4Q06945 MIR4536-1-201ENST00000583537 88 ntBASIC1.96□□□□□ -2.1
SOX4Q06945 AC145423.2-201ENST00000610631 239 ntBASIC1.96□□□□□ -2.1
SOX4Q06945 MIR8081-201ENST00000611533 95 ntBASIC1.96□□□□□ -2.1
SOX4Q06945 AC084768.2-201ENST00000622736 221 ntBASIC1.96□□□□□ -2.1
SOX4Q06945 RNA5SP37-201ENST00000365420 130 ntBASIC1.95□□□□□ -2.1
SOX4Q06945 RNU6-243P-201ENST00000391140 107 ntBASIC1.95□□□□□ -2.1
SOX4Q06945 SNORD93-201ENST00000408813 74 ntBASIC1.95□□□□□ -2.1
SOX4Q06945 SNORA25.16-201ENST00000516741 121 ntBASIC1.95□□□□□ -2.1
SOX4Q06945 AL161722.3-201ENST00000605789 2983 ntBASIC1.95□□□□□ -2.1
SOX4Q06945 AL353997.5-201ENST00000618886 171 ntBASIC1.95□□□□□ -2.1
SOX4Q06945 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
SOX4Q06945 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SOX4Q06945 RNU4-58P-201ENST00000363192 141 ntBASIC1.94□□□□□ -2.1
SOX4Q06945 RNU6-1229P-201ENST00000364295 107 ntBASIC1.94□□□□□ -2.1
SOX4Q06945 RNU6-580P-201ENST00000365159 107 ntBASIC1.94□□□□□ -2.1
SOX4Q06945 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
SOX4Q06945 RNU6-482P-201ENST00000391068 107 ntBASIC1.94□□□□□ -2.1
SOX4Q06945 Y_RNA.588-201ENST00000391254 102 ntBASIC1.94□□□□□ -2.1
SOX4Q06945 MIR4299-201ENST00000577899 72 ntBASIC1.94□□□□□ -2.1
SOX4Q06945 MIR4796-201ENST00000580742 81 ntBASIC1.94□□□□□ -2.1
SOX4Q06945 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
SOX4Q06945 RNU6-53P-201ENST00000365367 106 ntBASIC1.93□□□□□ -2.1
SOX4Q06945 MIR18B-201ENST00000454574 71 ntBASIC1.93□□□□□ -2.1
SOX4Q06945 RNU7-106P-201ENST00000459514 67 ntBASIC1.93□□□□□ -2.1
SOX4Q06945 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.93□□□□□ -2.1
SOX4Q06945 AL096840.1-201ENST00000603287 93 ntBASIC1.93□□□□□ -2.1
SOX4Q06945 U7.4-201ENST00000614961 63 ntBASIC1.93□□□□□ -2.1
SOX4Q06945 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SOX4Q06945 SNORA16.1-201ENST00000364597 132 ntBASIC1.92□□□□□ -2.1
SOX4Q06945 RNU1-36P-201ENST00000365130 165 ntBASIC1.92□□□□□ -2.1
SOX4Q06945 RNU6-811P-201ENST00000384069 107 ntBASIC1.92□□□□□ -2.1
SOX4Q06945 SNORA17.3-201ENST00000391159 129 ntBASIC1.92□□□□□ -2.1
SOX4Q06945 snoU13.9-201ENST00000458927 103 ntBASIC1.92□□□□□ -2.1
SOX4Q06945 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.92□□□□□ -2.1
SOX4Q06945 AC103810.8-201ENST00000607347 118 ntBASIC1.92□□□□□ -2.1
SOX4Q06945 uc_338.20-201ENST00000621563 178 ntBASIC1.92□□□□□ -2.1
SOX4Q06945 MIR302D-201ENST00000362275 68 ntBASIC1.91□□□□□ -2.1
SOX4Q06945 RNU6-1094P-201ENST00000362416 104 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 274.5 ms