Protein–RNA interactions for Protein: Q02388

COL7A1, Collagen alpha-1(VII) chain, humanhuman

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1Q02388 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.32□□□□□ -2.46
COL7A1Q02388 RNU6-291P-201ENST00000384720 107 ntBASIC-0.32□□□□□ -2.46
COL7A1Q02388 RNU6-576P-201ENST00000390854 102 ntBASIC-0.32□□□□□ -2.46
COL7A1Q02388 SNORA53-201ENST00000391141 249 ntBASIC-0.32□□□□□ -2.46
COL7A1Q02388 RNU6-710P-201ENST00000410424 105 ntBASIC-0.32□□□□□ -2.46
COL7A1Q02388 RNU6-592P-201ENST00000411333 103 ntBASIC-0.32□□□□□ -2.46
COL7A1Q02388 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-0.32□□□□□ -2.46
COL7A1Q02388 MTND5P5-201ENST00000503764 376 ntBASIC-0.32□□□□□ -2.46
COL7A1Q02388 RNU6-191P-201ENST00000516295 94 ntBASIC-0.32□□□□□ -2.46
COL7A1Q02388 AC144568.1-201ENST00000520139 137 ntBASIC-0.32□□□□□ -2.46
COL7A1Q02388 MIR3920-201ENST00000581751 86 ntBASIC-0.32□□□□□ -2.46
COL7A1Q02388 MIR5188-201ENST00000583467 113 ntBASIC-0.32□□□□□ -2.46
COL7A1Q02388 SNORD58B-201ENST00000607313 66 ntBASIC-0.32□□□□□ -2.46
COL7A1Q02388 DLEU2_1.1-201ENST00000612089 120 ntBASIC-0.32□□□□□ -2.46
COL7A1Q02388 AC004223.4-201ENST00000612426 332 ntBASIC-0.32□□□□□ -2.46
COL7A1Q02388 DLEU2_1.2-201ENST00000614667 120 ntBASIC-0.32□□□□□ -2.46
COL7A1Q02388 U2.1-201ENST00000618978 145 ntBASIC-0.32□□□□□ -2.46
COL7A1Q02388 Y_RNA.44-201ENST00000362676 108 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 SNORA22.1-201ENST00000362701 134 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 SNORA2.1-201ENST00000363089 137 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 RNU6-1306P-201ENST00000365219 99 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 RNU4-17P-201ENST00000365598 141 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 Y_RNA.414-201ENST00000384011 101 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 RNU6-38P-201ENST00000384085 107 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 RNU6-306P-201ENST00000384617 107 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 MIR519A1-201ENST00000385257 85 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 MIR1255B2-201ENST00000408618 67 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 AL009048.1-201ENST00000450437 298 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 RNU7-63P-201ENST00000459054 62 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 RNU7-115P-201ENST00000516433 55 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 RNU7-137P-201ENST00000516788 62 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 RNU7-30P-201ENST00000516835 62 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 RNU7-70P-201ENST00000516941 66 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 ZNF519P2-201ENST00000557032 169 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 MIR548AE2-201ENST00000583456 67 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 RN7SKP299-201ENST00000606679 301 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 AC025521.1-201ENST00000621624 286 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 RNU4-10P-201ENST00000364383 140 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 RNU6-593P-201ENST00000364716 112 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 SNORD101-201ENST00000384027 73 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 RNU6-926P-201ENST00000384075 107 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 RNU6-458P-201ENST00000384179 107 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 MIR147A-201ENST00000385079 72 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 AC244090.1-201ENST00000441884 93 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 RNU6-1129P-201ENST00000515964 104 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 RNU6-120P-201ENST00000516077 103 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 RNU6-155P-201ENST00000516347 100 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 SNORD67.1-201ENST00000516618 108 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 SNORA40.17-201ENST00000517256 115 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 AC100767.1-201ENST00000528178 123 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 AC024909.2-201ENST00000553035 286 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-0.33□□□□□ -2.46
COL7A1Q02388 MIR4536-1-201ENST00000583537 88 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 AC092747.3-201ENST00000603769 301 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 U6.58-201ENST00000613107 107 ntBASIC-0.33□□□□□ -2.46
COL7A1Q02388 MTND5P26-201ENST00000426018 1752 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 Y_RNA.144-201ENST00000363521 113 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 RNA5SP403-201ENST00000363598 108 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 RNU6-973P-201ENST00000364690 107 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 RNU6-690P-201ENST00000365242 106 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 Y_RNA.474-201ENST00000384341 102 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 RNU6-102P-201ENST00000384485 104 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 MIR203A-201ENST00000384836 110 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 MIR29B1-201ENST00000385015 81 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 MIR624-201ENST00000385217 97 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 AL603914.1-201ENST00000401964 204 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 AL603910.2-201ENST00000407268 136 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 RNU6-908P-201ENST00000410160 94 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 AC108059.2-201ENST00000434626 151 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 MTND2P14-201ENST00000482139 351 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 SEPT14P8-201ENST00000508026 178 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 MTCO2P24-201ENST00000515611 426 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 RNU6-126P-201ENST00000516685 103 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 RNU6-1088P-201ENST00000516850 104 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 AC141846.1-201ENST00000568348 142 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-0.34□□□□□ -2.46
COL7A1Q02388 MIR4464-201ENST00000580818 92 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 AL359881.1-201ENST00000602916 267 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 DLEU2_2.2-201ENST00000615474 90 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 PISRT1.1-201ENST00000616930 107 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 MIR6841-201ENST00000637129 72 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 RNU6-1283P-201ENST00000365314 105 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 RNU6-54P-201ENST00000365563 107 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 Y_RNA.462-201ENST00000384268 102 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 SNORD116-29-201ENST00000384516 83 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 MT-TW-201ENST00000387382 68 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 RNU6-243P-201ENST00000391140 107 ntBASIC-0.34□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 387.8 ms