Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 RNU6-519P-201ENST00000410590 108 ntBASIC1.95□□□□□ -2.1
ERVFC1P60507 RNU6-321P-201ENST00000410912 106 ntBASIC1.95□□□□□ -2.1
ERVFC1P60507 AC138749.4-201ENST00000563970 127 ntBASIC1.95□□□□□ -2.1
ERVFC1P60507 MIR4712-201ENST00000583750 82 ntBASIC1.95□□□□□ -2.1
ERVFC1P60507 AC008163.1-202ENST00000636004 2889 ntBASIC1.94□□□□□ -2.1
ERVFC1P60507 SNORD115-37-201ENST00000363768 82 ntBASIC1.94□□□□□ -2.1
ERVFC1P60507 MT-TN-201ENST00000387400 73 ntBASIC1.94□□□□□ -2.1
ERVFC1P60507 RNA5SP338-201ENST00000410495 85 ntBASIC1.94□□□□□ -2.1
ERVFC1P60507 AP1B1P2-201ENST00000416196 106 ntBASIC1.94□□□□□ -2.1
ERVFC1P60507 RNU6-717P-201ENST00000459076 104 ntBASIC1.94□□□□□ -2.1
ERVFC1P60507 SNORD4B-201ENST00000459083 72 ntBASIC1.94□□□□□ -2.1
ERVFC1P60507 MIR4303-201ENST00000581299 66 ntBASIC1.94□□□□□ -2.1
ERVFC1P60507 MIR3192-201ENST00000584920 77 ntBASIC1.94□□□□□ -2.1
ERVFC1P60507 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.94□□□□□ -2.1
ERVFC1P60507 AL512598.1-201ENST00000610158 273 ntBASIC1.94□□□□□ -2.1
ERVFC1P60507 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
ERVFC1P60507 RNA5SP259-201ENST00000365541 109 ntBASIC1.93□□□□□ -2.1
ERVFC1P60507 RNU6-571P-201ENST00000384128 107 ntBASIC1.93□□□□□ -2.1
ERVFC1P60507 MIR588-201ENST00000384900 83 ntBASIC1.93□□□□□ -2.1
ERVFC1P60507 MIR1236-201ENST00000408340 102 ntBASIC1.93□□□□□ -2.1
ERVFC1P60507 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.93□□□□□ -2.1
ERVFC1P60507 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.93□□□□□ -2.1
ERVFC1P60507 AC027119.1-201ENST00000440877 241 ntBASIC1.93□□□□□ -2.1
ERVFC1P60507 MIR4264-201ENST00000583520 66 ntBASIC1.93□□□□□ -2.1
ERVFC1P60507 RNU6-315P-201ENST00000362666 107 ntBASIC1.92□□□□□ -2.1
ERVFC1P60507 RNU6-396P-201ENST00000365369 105 ntBASIC1.92□□□□□ -2.1
ERVFC1P60507 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
ERVFC1P60507 AC073261.1-201ENST00000429409 121 ntBASIC1.92□□□□□ -2.1
ERVFC1P60507 AC025033.1-201ENST00000463883 194 ntBASIC1.92□□□□□ -2.1
ERVFC1P60507 AC090897.1-201ENST00000580909 226 ntBASIC1.92□□□□□ -2.1
ERVFC1P60507 SNORA4-201ENST00000584302 138 ntBASIC1.92□□□□□ -2.1
ERVFC1P60507 AL096861.1-201ENST00000610899 123 ntBASIC1.92□□□□□ -2.1
ERVFC1P60507 MIR7111-201ENST00000619751 72 ntBASIC1.92□□□□□ -2.1
ERVFC1P60507 MIR30D-201ENST00000362283 70 ntBASIC1.91□□□□□ -2.1
ERVFC1P60507 RNU4-83P-201ENST00000410863 133 ntBASIC1.91□□□□□ -2.1
ERVFC1P60507 HSPE1P24-201ENST00000450782 238 ntBASIC1.91□□□□□ -2.1
ERVFC1P60507 AC015688.6-201ENST00000577737 104 ntBASIC1.91□□□□□ -2.1
ERVFC1P60507 GHRLOS.1-201ENST00000610995 70 ntBASIC1.91□□□□□ -2.1
ERVFC1P60507 Y_RNA.57-201ENST00000362806 113 ntBASIC1.9□□□□□ -2.11
ERVFC1P60507 RNU6-624P-201ENST00000363411 107 ntBASIC1.9□□□□□ -2.11
ERVFC1P60507 RNU6-850P-201ENST00000516934 103 ntBASIC1.9□□□□□ -2.11
ERVFC1P60507 AP003716.2-201ENST00000528260 108 ntBASIC1.9□□□□□ -2.11
ERVFC1P60507 SNORA77B-201ENST00000578179 125 ntBASIC1.9□□□□□ -2.11
ERVFC1P60507 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.9□□□□□ -2.11
ERVFC1P60507 MIR6740-201ENST00000618268 113 ntBASIC1.9□□□□□ -2.11
ERVFC1P60507 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.9□□□□□ -2.11
ERVFC1P60507 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
ERVFC1P60507 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
ERVFC1P60507 Y_RNA.648-201ENST00000459455 110 ntBASIC1.89□□□□□ -2.11
ERVFC1P60507 SNORA25.13-201ENST00000516395 103 ntBASIC1.89□□□□□ -2.11
ERVFC1P60507 RNU6-922P-201ENST00000516753 99 ntBASIC1.89□□□□□ -2.11
ERVFC1P60507 RNU1-40P-201ENST00000516816 164 ntBASIC1.89□□□□□ -2.11
ERVFC1P60507 RNU1-97P-201ENST00000516872 164 ntBASIC1.89□□□□□ -2.11
ERVFC1P60507 RNU11-2P-201ENST00000516898 142 ntBASIC1.89□□□□□ -2.11
ERVFC1P60507 MIR4500-201ENST00000579472 76 ntBASIC1.89□□□□□ -2.11
ERVFC1P60507 AL359821.1-201ENST00000605519 182 ntBASIC1.89□□□□□ -2.11
ERVFC1P60507 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.89□□□□□ -2.11
ERVFC1P60507 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.88□□□□□ -2.11
ERVFC1P60507 Y_RNA.119-201ENST00000363301 96 ntBASIC1.88□□□□□ -2.11
ERVFC1P60507 MT-TF-201ENST00000387314 71 ntBASIC1.88□□□□□ -2.11
ERVFC1P60507 SNORA67.5-201ENST00000391036 107 ntBASIC1.88□□□□□ -2.11
ERVFC1P60507 RNA5SP489-201ENST00000410986 109 ntBASIC1.88□□□□□ -2.11
ERVFC1P60507 RNU7-85P-201ENST00000458851 63 ntBASIC1.88□□□□□ -2.11
ERVFC1P60507 TRMT112P2-201ENST00000512910 132 ntBASIC1.88□□□□□ -2.11
ERVFC1P60507 MIR2115-201ENST00000516657 100 ntBASIC1.88□□□□□ -2.11
ERVFC1P60507 MIR8070-201ENST00000616510 88 ntBASIC1.88□□□□□ -2.11
ERVFC1P60507 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
ERVFC1P60507 MIR377-201ENST00000362145 69 ntBASIC1.87□□□□□ -2.11
ERVFC1P60507 MIR337-201ENST00000362281 93 ntBASIC1.87□□□□□ -2.11
ERVFC1P60507 RNU6-1165P-201ENST00000410119 107 ntBASIC1.87□□□□□ -2.11
ERVFC1P60507 snoU13.25-201ENST00000458945 104 ntBASIC1.87□□□□□ -2.11
ERVFC1P60507 AC139453.2-201ENST00000487255 133 ntBASIC1.87□□□□□ -2.11
ERVFC1P60507 RN7SL274P-201ENST00000492268 272 ntBASIC1.87□□□□□ -2.11
ERVFC1P60507 AL133373.1-201ENST00000497098 94 ntBASIC1.87□□□□□ -2.11
ERVFC1P60507 RNU7-153P-201ENST00000516455 62 ntBASIC1.87□□□□□ -2.11
ERVFC1P60507 MIR4255-201ENST00000579351 72 ntBASIC1.87□□□□□ -2.11
ERVFC1P60507 MIR4713-201ENST00000582691 75 ntBASIC1.87□□□□□ -2.11
ERVFC1P60507 MIR502-201ENST00000606349 86 ntBASIC1.87□□□□□ -2.11
ERVFC1P60507 AC145423.2-201ENST00000610631 239 ntBASIC1.87□□□□□ -2.11
ERVFC1P60507 U6.109-201ENST00000636749 87 ntBASIC1.87□□□□□ -2.11
ERVFC1P60507 RNU6-1229P-201ENST00000364295 107 ntBASIC1.86□□□□□ -2.11
ERVFC1P60507 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
ERVFC1P60507 RNU6-129P-201ENST00000391022 107 ntBASIC1.86□□□□□ -2.11
ERVFC1P60507 RPL30P7-201ENST00000479312 323 ntBASIC1.86□□□□□ -2.11
ERVFC1P60507 RNU6-557P-201ENST00000516842 110 ntBASIC1.86□□□□□ -2.11
ERVFC1P60507 AC012493.3-201ENST00000604494 112 ntBASIC1.86□□□□□ -2.11
ERVFC1P60507 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
ERVFC1P60507 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
ERVFC1P60507 RNU6-580P-201ENST00000365159 107 ntBASIC1.85□□□□□ -2.11
ERVFC1P60507 RNU6-439P-201ENST00000384188 106 ntBASIC1.85□□□□□ -2.11
ERVFC1P60507 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
ERVFC1P60507 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
ERVFC1P60507 SNORD36A-201ENST00000362874 73 ntBASIC1.84□□□□□ -2.11
ERVFC1P60507 SNORA16.1-201ENST00000364597 132 ntBASIC1.84□□□□□ -2.11
ERVFC1P60507 RNU7-62P-201ENST00000458856 62 ntBASIC1.84□□□□□ -2.11
ERVFC1P60507 RNU7-95P-201ENST00000459222 64 ntBASIC1.84□□□□□ -2.11
ERVFC1P60507 SNORA25.3-201ENST00000363205 127 ntBASIC1.83□□□□□ -2.12
ERVFC1P60507 RNU4-32P-201ENST00000363404 141 ntBASIC1.83□□□□□ -2.12
ERVFC1P60507 RNU6-478P-201ENST00000363904 110 ntBASIC1.83□□□□□ -2.12
ERVFC1P60507 RNU6-1254P-201ENST00000391266 104 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 196.5 ms