Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC084368.1-201ENST00000620935 65 ntBASIC-0.47□□□□□ -2.48
CDH6P55285 RNU6-690P-201ENST00000365242 106 ntBASIC-0.48□□□□□ -2.49
CDH6P55285 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.48□□□□□ -2.49
CDH6P55285 MIR635-201ENST00000384830 98 ntBASIC-0.48□□□□□ -2.49
CDH6P55285 TRAJ51-201ENST00000504127 63 ntBASIC-0.48□□□□□ -2.49
CDH6P55285 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.48□□□□□ -2.49
CDH6P55285 RNU2-4P-201ENST00000606190 192 ntBASIC-0.48□□□□□ -2.49
CDH6P55285 MIR548AZ-201ENST00000616567 95 ntBASIC-0.48□□□□□ -2.49
CDH6P55285 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.48□□□□□ -2.49
CDH6P55285 MIR335-201ENST00000362173 94 ntBASIC-0.49□□□□□ -2.49
CDH6P55285 SNORA25.7-201ENST00000364375 127 ntBASIC-0.49□□□□□ -2.49
CDH6P55285 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.49□□□□□ -2.49
CDH6P55285 RNU6-449P-201ENST00000383914 107 ntBASIC-0.49□□□□□ -2.49
CDH6P55285 RNU6-643P-201ENST00000384018 107 ntBASIC-0.49□□□□□ -2.49
CDH6P55285 BX276092.1-201ENST00000427368 251 ntBASIC-0.49□□□□□ -2.49
CDH6P55285 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.49□□□□□ -2.49
CDH6P55285 MIR148A-201ENST00000362215 68 ntBASIC-0.5□□□□□ -2.49
CDH6P55285 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.5□□□□□ -2.49
CDH6P55285 RNU6-509P-201ENST00000363519 107 ntBASIC-0.5□□□□□ -2.49
CDH6P55285 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.5□□□□□ -2.49
CDH6P55285 SNORA32.3-201ENST00000384772 121 ntBASIC-0.5□□□□□ -2.49
CDH6P55285 MIR224-201ENST00000384889 81 ntBASIC-0.5□□□□□ -2.49
CDH6P55285 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.5□□□□□ -2.49
CDH6P55285 RNU6-985P-201ENST00000410182 104 ntBASIC-0.5□□□□□ -2.49
CDH6P55285 AC097635.1-201ENST00000450678 155 ntBASIC-0.5□□□□□ -2.49
CDH6P55285 RNY3P16-201ENST00000516338 101 ntBASIC-0.5□□□□□ -2.49
CDH6P55285 RNU2-35P-201ENST00000516446 142 ntBASIC-0.5□□□□□ -2.49
CDH6P55285 MIR4500-201ENST00000579472 76 ntBASIC-0.5□□□□□ -2.49
CDH6P55285 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.5□□□□□ -2.49
CDH6P55285 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.51□□□□□ -2.49
CDH6P55285 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.51□□□□□ -2.49
CDH6P55285 SNORD49B-201ENST00000365172 72 ntBASIC-0.51□□□□□ -2.49
CDH6P55285 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.51□□□□□ -2.49
CDH6P55285 MIR516B1-201ENST00000385211 90 ntBASIC-0.51□□□□□ -2.49
CDH6P55285 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.51□□□□□ -2.49
CDH6P55285 RNU6-493P-201ENST00000391321 108 ntBASIC-0.51□□□□□ -2.49
CDH6P55285 MIR876-201ENST00000401147 81 ntBASIC-0.51□□□□□ -2.49
CDH6P55285 RPS29P8-201ENST00000445109 171 ntBASIC-0.51□□□□□ -2.49
CDH6P55285 AC020661.2-201ENST00000560114 134 ntBASIC-0.51□□□□□ -2.49
CDH6P55285 MIR4643-201ENST00000577473 78 ntBASIC-0.51□□□□□ -2.49
CDH6P55285 AC108676.2-201ENST00000605225 163 ntBASIC-0.51□□□□□ -2.49
CDH6P55285 MIR3666-201ENST00000607845 111 ntBASIC-0.51□□□□□ -2.49
CDH6P55285 RN7SL660P-201ENST00000614852 299 ntBASIC-0.51□□□□□ -2.49
CDH6P55285 MIR6086-201ENST00000638065 55 ntBASIC-0.51□□□□□ -2.49
CDH6P55285 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.52□□□□□ -2.49
CDH6P55285 SNORD14C-201ENST00000365382 88 ntBASIC-0.52□□□□□ -2.49
CDH6P55285 MIR1270-201ENST00000459320 83 ntBASIC-0.52□□□□□ -2.49
CDH6P55285 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.52□□□□□ -2.49
CDH6P55285 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.53□□□□□ -2.49
CDH6P55285 RNU6-865P-201ENST00000364772 107 ntBASIC-0.53□□□□□ -2.49
CDH6P55285 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.53□□□□□ -2.49
CDH6P55285 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.53□□□□□ -2.49
CDH6P55285 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.53□□□□□ -2.49
CDH6P55285 RNA5SP236-201ENST00000516169 116 ntBASIC-0.53□□□□□ -2.49
CDH6P55285 SNORA25.13-201ENST00000516395 103 ntBASIC-0.53□□□□□ -2.49
CDH6P55285 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.54□□□□□ -2.5
CDH6P55285 Y_RNA.202-201ENST00000364083 110 ntBASIC-0.54□□□□□ -2.5
CDH6P55285 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.54□□□□□ -2.5
CDH6P55285 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.54□□□□□ -2.5
CDH6P55285 MT-TW-201ENST00000387382 68 ntBASIC-0.54□□□□□ -2.5
CDH6P55285 SNORD75.1-201ENST00000408373 60 ntBASIC-0.54□□□□□ -2.5
CDH6P55285 MIR1302-6-201ENST00000408466 90 ntBASIC-0.54□□□□□ -2.5
CDH6P55285 RNU7-48P-201ENST00000458875 63 ntBASIC-0.54□□□□□ -2.5
CDH6P55285 SNORD126-201ENST00000459475 77 ntBASIC-0.54□□□□□ -2.5
CDH6P55285 uc_338.36-201ENST00000622331 158 ntBASIC-0.54□□□□□ -2.5
CDH6P55285 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.55□□□□□ -2.5
CDH6P55285 Y_RNA.535-201ENST00000384612 99 ntBASIC-0.55□□□□□ -2.5
CDH6P55285 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.55□□□□□ -2.5
CDH6P55285 RNA5SP300-201ENST00000391197 107 ntBASIC-0.55□□□□□ -2.5
CDH6P55285 RNA5SP25-201ENST00000410815 110 ntBASIC-0.55□□□□□ -2.5
CDH6P55285 AC109327.2-201ENST00000448339 378 ntBASIC-0.55□□□□□ -2.5
CDH6P55285 RNU6-240P-201ENST00000516098 97 ntBASIC-0.55□□□□□ -2.5
CDH6P55285 RNU7-13P-201ENST00000516413 62 ntBASIC-0.55□□□□□ -2.5
CDH6P55285 RNU6-635P-201ENST00000516651 102 ntBASIC-0.55□□□□□ -2.5
CDH6P55285 MIR3920-201ENST00000581751 86 ntBASIC-0.55□□□□□ -2.5
CDH6P55285 AC021443.1-201ENST00000604478 211 ntBASIC-0.55□□□□□ -2.5
CDH6P55285 AL162726.3-218ENST00000636401 95 ntBASIC-0.55□□□□□ -2.5
CDH6P55285 RNU6-238P-201ENST00000363313 106 ntBASIC-0.56□□□□□ -2.5
CDH6P55285 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.56□□□□□ -2.5
CDH6P55285 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.56□□□□□ -2.5
CDH6P55285 MIR206-201ENST00000384872 86 ntBASIC-0.56□□□□□ -2.5
CDH6P55285 RNU7-195P-201ENST00000458793 62 ntBASIC-0.56□□□□□ -2.5
CDH6P55285 AC074198.2-201ENST00000508153 258 ntBASIC-0.56□□□□□ -2.5
CDH6P55285 AC138907.4-201ENST00000570107 226 ntBASIC-0.56□□□□□ -2.5
CDH6P55285 U6.104-201ENST00000637979 90 ntBASIC-0.56□□□□□ -2.5
CDH6P55285 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.57□□□□□ -2.5
CDH6P55285 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.57□□□□□ -2.5
CDH6P55285 SNORA33.2-201ENST00000365413 134 ntBASIC-0.57□□□□□ -2.5
CDH6P55285 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.57□□□□□ -2.5
CDH6P55285 RNU6-639P-201ENST00000384074 107 ntBASIC-0.57□□□□□ -2.5
CDH6P55285 MIR196A2-201ENST00000385189 110 ntBASIC-0.57□□□□□ -2.5
CDH6P55285 RNU4-69P-201ENST00000410677 143 ntBASIC-0.57□□□□□ -2.5
CDH6P55285 AC244250.2-201ENST00000418731 148 ntBASIC-0.57□□□□□ -2.5
CDH6P55285 MTATP6P23-201ENST00000440153 476 ntBASIC-0.57□□□□□ -2.5
CDH6P55285 MIR4473-201ENST00000583731 91 ntBASIC-0.57□□□□□ -2.5
CDH6P55285 FTX_2.1-201ENST00000618816 94 ntBASIC-0.57□□□□□ -2.5
CDH6P55285 MIR4788-201ENST00000639104 80 ntBASIC-0.57□□□□□ -2.5
CDH6P55285 SNORD114-15-201ENST00000364687 72 ntBASIC-0.58□□□□□ -2.5
CDH6P55285 SNORD63B-201ENST00000411005 70 ntBASIC-0.58□□□□□ -2.5
CDH6P55285 RNU7-164P-201ENST00000459221 62 ntBASIC-0.58□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 200.2 ms