Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
ATN1P54259 MIR30E-201ENST00000362104 92 ntBASIC3.27□□□□□ -1.89
ATN1P54259 RNU6-930P-201ENST00000390938 100 ntBASIC3.27□□□□□ -1.89
ATN1P54259 RNU6-237P-201ENST00000515985 71 ntBASIC3.27□□□□□ -1.89
ATN1P54259 MIR7843-201ENST00000622274 79 ntBASIC3.27□□□□□ -1.89
ATN1P54259 RNU6-35P-201ENST00000384530 107 ntBASIC3.26□□□□□ -1.89
ATN1P54259 RNU6-851P-201ENST00000384565 107 ntBASIC3.26□□□□□ -1.89
ATN1P54259 MIR7-2-201ENST00000384970 110 ntBASIC3.26□□□□□ -1.89
ATN1P54259 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC3.26□□□□□ -1.89
ATN1P54259 MIR3657-201ENST00000584818 117 ntBASIC3.26□□□□□ -1.89
ATN1P54259 SNRPGP19-201ENST00000603826 189 ntBASIC3.26□□□□□ -1.89
ATN1P54259 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ATN1P54259 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
ATN1P54259 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ATN1P54259 SNORD115-44-201ENST00000365391 82 ntBASIC3.25□□□□□ -1.89
ATN1P54259 SNORA70B-201ENST00000384210 135 ntBASIC3.25□□□□□ -1.89
ATN1P54259 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
ATN1P54259 RNA5SP344-201ENST00000411081 104 ntBASIC3.25□□□□□ -1.89
ATN1P54259 RNU1-41P-201ENST00000516161 162 ntBASIC3.25□□□□□ -1.89
ATN1P54259 RNU1-48P-201ENST00000516400 162 ntBASIC3.25□□□□□ -1.89
ATN1P54259 RNU6-765P-201ENST00000516916 99 ntBASIC3.25□□□□□ -1.89
ATN1P54259 IGLVVI-22-1-201ENST00000521183 211 ntBASIC3.25□□□□□ -1.89
ATN1P54259 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.24□□□□□ -1.89
ATN1P54259 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
ATN1P54259 MIR216B-201ENST00000390186 82 ntBASIC3.24□□□□□ -1.89
ATN1P54259 RNU6-360P-201ENST00000390944 104 ntBASIC3.24□□□□□ -1.89
ATN1P54259 NAMPTP3-201ENST00000569273 224 ntBASIC3.24□□□□□ -1.89
ATN1P54259 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC3.24□□□□□ -1.89
ATN1P54259 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.24□□□□□ -1.89
ATN1P54259 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ATN1P54259 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ATN1P54259 Y_RNA.13-201ENST00000362403 112 ntBASIC3.23□□□□□ -1.89
ATN1P54259 RNU1-91P-201ENST00000364746 163 ntBASIC3.23□□□□□ -1.89
ATN1P54259 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.23□□□□□ -1.89
ATN1P54259 RNU6-656P-201ENST00000516785 107 ntBASIC3.23□□□□□ -1.89
ATN1P54259 AC003982.1-202ENST00000469928 248 ntBASIC3.22□□□□□ -1.89
ATN1P54259 5S_rRNA.15-201ENST00000611169 127 ntBASIC3.22□□□□□ -1.89
ATN1P54259 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ATN1P54259 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.21□□□□□ -1.9
ATN1P54259 MIR148B-201ENST00000362252 99 ntBASIC3.21□□□□□ -1.9
ATN1P54259 RNU6-580P-201ENST00000365159 107 ntBASIC3.21□□□□□ -1.9
ATN1P54259 U8.9-201ENST00000365667 134 ntBASIC3.21□□□□□ -1.9
ATN1P54259 RNA5SP501-201ENST00000410990 112 ntBASIC3.21□□□□□ -1.9
ATN1P54259 AL513328.1-201ENST00000446460 224 ntBASIC3.21□□□□□ -1.9
ATN1P54259 RN7SL20P-201ENST00000488827 297 ntBASIC3.21□□□□□ -1.9
ATN1P54259 AC107016.2-201ENST00000547968 190 ntBASIC3.21□□□□□ -1.9
ATN1P54259 MIR4769-201ENST00000584126 77 ntBASIC3.21□□□□□ -1.9
ATN1P54259 MIR548V-201ENST00000584165 80 ntBASIC3.21□□□□□ -1.9
ATN1P54259 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.21□□□□□ -1.9
ATN1P54259 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.2□□□□□ -1.9
ATN1P54259 MIR4524B-201ENST00000581569 115 ntBASIC3.2□□□□□ -1.9
ATN1P54259 MIR6516-201ENST00000630554 81 ntBASIC3.2□□□□□ -1.9
ATN1P54259 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
ATN1P54259 SNORA9.2-201ENST00000365361 133 ntBASIC3.19□□□□□ -1.9
ATN1P54259 RNU6-260P-201ENST00000384092 107 ntBASIC3.19□□□□□ -1.9
ATN1P54259 SNORD41-201ENST00000386967 70 ntBASIC3.19□□□□□ -1.9
ATN1P54259 AC004965.1-201ENST00000413033 213 ntBASIC3.19□□□□□ -1.9
ATN1P54259 HMGN1P18-201ENST00000457642 277 ntBASIC3.19□□□□□ -1.9
ATN1P54259 RNU7-185P-201ENST00000459215 60 ntBASIC3.19□□□□□ -1.9
ATN1P54259 snoU13.26-201ENST00000459452 105 ntBASIC3.19□□□□□ -1.9
ATN1P54259 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
ATN1P54259 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ATN1P54259 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
ATN1P54259 RNU6-859P-201ENST00000362728 107 ntBASIC3.18□□□□□ -1.9
ATN1P54259 RNU1-112P-201ENST00000364401 164 ntBASIC3.18□□□□□ -1.9
ATN1P54259 RNU6-203P-201ENST00000384038 104 ntBASIC3.18□□□□□ -1.9
ATN1P54259 MIR518A2-201ENST00000384966 87 ntBASIC3.18□□□□□ -1.9
ATN1P54259 AC245166.1-201ENST00000521012 253 ntBASIC3.18□□□□□ -1.9
ATN1P54259 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
ATN1P54259 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ATN1P54259 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.18□□□□□ -1.9
ATN1P54259 RNA5SP68-201ENST00000363885 119 ntBASIC3.17□□□□□ -1.9
ATN1P54259 RNU1-148P-201ENST00000384472 162 ntBASIC3.17□□□□□ -1.9
ATN1P54259 MIR194-1-201ENST00000384892 85 ntBASIC3.17□□□□□ -1.9
ATN1P54259 MIR504-201ENST00000385065 83 ntBASIC3.17□□□□□ -1.9
ATN1P54259 MIR548F3-201ENST00000408509 87 ntBASIC3.17□□□□□ -1.9
ATN1P54259 SNORD53-201ENST00000579969 78 ntBASIC3.17□□□□□ -1.9
ATN1P54259 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.17□□□□□ -1.9
ATN1P54259 MIR6739-201ENST00000622461 75 ntBASIC3.17□□□□□ -1.9
ATN1P54259 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ATN1P54259 SNORA2.1-201ENST00000363089 137 ntBASIC3.16□□□□□ -1.9
ATN1P54259 U8.2-201ENST00000363156 134 ntBASIC3.16□□□□□ -1.9
ATN1P54259 MIR1257-201ENST00000408490 117 ntBASIC3.16□□□□□ -1.9
ATN1P54259 RNU7-119P-201ENST00000459279 63 ntBASIC3.16□□□□□ -1.9
ATN1P54259 RNA5SP24-201ENST00000516478 95 ntBASIC3.16□□□□□ -1.9
ATN1P54259 SNORA64.4-201ENST00000516632 81 ntBASIC3.16□□□□□ -1.9
ATN1P54259 MIR6817-201ENST00000615588 66 ntBASIC3.16□□□□□ -1.9
ATN1P54259 RNU4-33P-201ENST00000364316 85 ntBASIC3.15□□□□□ -1.91
ATN1P54259 MIR630-201ENST00000384957 97 ntBASIC3.15□□□□□ -1.91
ATN1P54259 RNA5SP148-201ENST00000516527 94 ntBASIC3.15□□□□□ -1.91
ATN1P54259 RNU6-56P-201ENST00000516986 93 ntBASIC3.15□□□□□ -1.91
ATN1P54259 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.15□□□□□ -1.91
ATN1P54259 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
ATN1P54259 SNORD113-2-201ENST00000391082 72 ntBASIC3.14□□□□□ -1.91
ATN1P54259 AL138827.1-201ENST00000402666 306 ntBASIC3.14□□□□□ -1.91
ATN1P54259 SCARNA20.6-201ENST00000517251 106 ntBASIC3.14□□□□□ -1.91
ATN1P54259 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ATN1P54259 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.14□□□□□ -1.91
ATN1P54259 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.13□□□□□ -1.91
ATN1P54259 RNU1-51P-201ENST00000365345 176 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 173.7 ms