Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 RNA5SP133-201ENST00000363368 119 ntBASIC1.88□□□□□ -2.11
CDR1P51861 RNA5SP259-201ENST00000365541 109 ntBASIC1.88□□□□□ -2.11
CDR1P51861 RNU6-524P-201ENST00000384270 107 ntBASIC1.88□□□□□ -2.11
CDR1P51861 RNU6-997P-201ENST00000384725 107 ntBASIC1.88□□□□□ -2.11
CDR1P51861 MIR519C-201ENST00000385053 87 ntBASIC1.88□□□□□ -2.11
CDR1P51861 AC244636.1-201ENST00000421152 228 ntBASIC1.88□□□□□ -2.11
CDR1P51861 JTBP1-201ENST00000441314 247 ntBASIC1.88□□□□□ -2.11
CDR1P51861 snoU13.2-201ENST00000459201 104 ntBASIC1.88□□□□□ -2.11
CDR1P51861 PRELID3BP2-201ENST00000605362 201 ntBASIC1.88□□□□□ -2.11
CDR1P51861 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.88□□□□□ -2.11
CDR1P51861 Y_RNA.168-201ENST00000363740 102 ntBASIC1.87□□□□□ -2.11
CDR1P51861 AC093729.1-201ENST00000513074 128 ntBASIC1.87□□□□□ -2.11
CDR1P51861 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.87□□□□□ -2.11
CDR1P51861 MIR3192-201ENST00000584920 77 ntBASIC1.87□□□□□ -2.11
CDR1P51861 AP000753.3-201ENST00000604083 169 ntBASIC1.87□□□□□ -2.11
CDR1P51861 MIR4662A-201ENST00000637499 67 ntBASIC1.87□□□□□ -2.11
CDR1P51861 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.86□□□□□ -2.11
CDR1P51861 MIR378A-201ENST00000362177 66 ntBASIC1.86□□□□□ -2.11
CDR1P51861 Y_RNA.94-201ENST00000363068 106 ntBASIC1.86□□□□□ -2.11
CDR1P51861 MIR563-201ENST00000385080 79 ntBASIC1.86□□□□□ -2.11
CDR1P51861 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.86□□□□□ -2.11
CDR1P51861 MIR1302-7-201ENST00000408841 72 ntBASIC1.86□□□□□ -2.11
CDR1P51861 AL357312.1-201ENST00000603879 298 ntBASIC1.86□□□□□ -2.11
CDR1P51861 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CDR1P51861 MIR588-201ENST00000384900 83 ntBASIC1.85□□□□□ -2.11
CDR1P51861 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CDR1P51861 AC087499.7-201ENST00000441958 109 ntBASIC1.85□□□□□ -2.11
CDR1P51861 SNRPGP12-201ENST00000449481 213 ntBASIC1.85□□□□□ -2.11
CDR1P51861 RNU6-922P-201ENST00000516753 99 ntBASIC1.85□□□□□ -2.11
CDR1P51861 RNU6-250P-201ENST00000516958 103 ntBASIC1.85□□□□□ -2.11
CDR1P51861 AC138749.4-201ENST00000563970 127 ntBASIC1.85□□□□□ -2.11
CDR1P51861 AC090897.1-201ENST00000580909 226 ntBASIC1.85□□□□□ -2.11
CDR1P51861 MIR4303-201ENST00000581299 66 ntBASIC1.85□□□□□ -2.11
CDR1P51861 AL096861.1-201ENST00000610899 123 ntBASIC1.85□□□□□ -2.11
CDR1P51861 MIR8066-201ENST00000617280 78 ntBASIC1.85□□□□□ -2.11
CDR1P51861 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.85□□□□□ -2.11
CDR1P51861 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CDR1P51861 RNU6-776P-201ENST00000364403 104 ntBASIC1.84□□□□□ -2.11
CDR1P51861 RNU6-1022P-201ENST00000365049 104 ntBASIC1.84□□□□□ -2.11
CDR1P51861 RNA5SP363-201ENST00000365072 115 ntBASIC1.84□□□□□ -2.11
CDR1P51861 RNU6-519P-201ENST00000410590 108 ntBASIC1.84□□□□□ -2.11
CDR1P51861 AC140658.3-201ENST00000567603 271 ntBASIC1.84□□□□□ -2.11
CDR1P51861 MIR4712-201ENST00000583750 82 ntBASIC1.84□□□□□ -2.11
CDR1P51861 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CDR1P51861 SNORD115-37-201ENST00000363768 82 ntBASIC1.83□□□□□ -2.12
CDR1P51861 RNU6-439P-201ENST00000384188 106 ntBASIC1.83□□□□□ -2.12
CDR1P51861 RNA5SP212-201ENST00000391223 107 ntBASIC1.83□□□□□ -2.12
CDR1P51861 RNU6-321P-201ENST00000410912 106 ntBASIC1.83□□□□□ -2.12
CDR1P51861 MIR4264-201ENST00000583520 66 ntBASIC1.83□□□□□ -2.12
CDR1P51861 SNORA4-201ENST00000584302 138 ntBASIC1.83□□□□□ -2.12
CDR1P51861 MIR6740-201ENST00000618268 113 ntBASIC1.83□□□□□ -2.12
CDR1P51861 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.83□□□□□ -2.12
CDR1P51861 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CDR1P51861 MIR337-201ENST00000362281 93 ntBASIC1.82□□□□□ -2.12
CDR1P51861 RNU6-396P-201ENST00000365369 105 ntBASIC1.82□□□□□ -2.12
CDR1P51861 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CDR1P51861 RNU4-83P-201ENST00000410863 133 ntBASIC1.82□□□□□ -2.12
CDR1P51861 HSPE1P24-201ENST00000450782 238 ntBASIC1.82□□□□□ -2.12
CDR1P51861 AC015688.6-201ENST00000577737 104 ntBASIC1.82□□□□□ -2.12
CDR1P51861 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.82□□□□□ -2.12
CDR1P51861 U6.109-201ENST00000636749 87 ntBASIC1.82□□□□□ -2.12
CDR1P51861 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CDR1P51861 MIR30D-201ENST00000362283 70 ntBASIC1.81□□□□□ -2.12
CDR1P51861 Y_RNA.57-201ENST00000362806 113 ntBASIC1.81□□□□□ -2.12
CDR1P51861 RNU6-571P-201ENST00000384128 107 ntBASIC1.81□□□□□ -2.12
CDR1P51861 MT-TN-201ENST00000387400 73 ntBASIC1.81□□□□□ -2.12
CDR1P51861 SNORD4B-201ENST00000459083 72 ntBASIC1.81□□□□□ -2.12
CDR1P51861 RNU6-65P-201ENST00000516332 98 ntBASIC1.81□□□□□ -2.12
CDR1P51861 RNU6-850P-201ENST00000516934 103 ntBASIC1.81□□□□□ -2.12
CDR1P51861 MIR4500-201ENST00000579472 76 ntBASIC1.81□□□□□ -2.12
CDR1P51861 AL512598.1-201ENST00000610158 273 ntBASIC1.81□□□□□ -2.12
CDR1P51861 SNORA25.3-201ENST00000363205 127 ntBASIC1.8□□□□□ -2.12
CDR1P51861 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
CDR1P51861 MIR1236-201ENST00000408340 102 ntBASIC1.8□□□□□ -2.12
CDR1P51861 RNU4-62P-201ENST00000410125 130 ntBASIC1.8□□□□□ -2.12
CDR1P51861 MIR2115-201ENST00000516657 100 ntBASIC1.8□□□□□ -2.12
CDR1P51861 SNORA77B-201ENST00000578179 125 ntBASIC1.8□□□□□ -2.12
CDR1P51861 GHRLOS.1-201ENST00000610995 70 ntBASIC1.8□□□□□ -2.12
CDR1P51861 Y_RNA.119-201ENST00000363301 96 ntBASIC1.79□□□□□ -2.12
CDR1P51861 RNU6-1165P-201ENST00000410119 107 ntBASIC1.79□□□□□ -2.12
CDR1P51861 snoU13.25-201ENST00000458945 104 ntBASIC1.79□□□□□ -2.12
CDR1P51861 RNU7-153P-201ENST00000516455 62 ntBASIC1.79□□□□□ -2.12
CDR1P51861 AC008163.1-202ENST00000636004 2889 ntBASIC1.78□□□□□ -2.12
CDR1P51861 SNORD48-201ENST00000364953 64 ntBASIC1.78□□□□□ -2.12
CDR1P51861 Y_RNA.508-201ENST00000384502 114 ntBASIC1.78□□□□□ -2.12
CDR1P51861 AP1B1P2-201ENST00000416196 106 ntBASIC1.78□□□□□ -2.12
CDR1P51861 RNU7-85P-201ENST00000458851 63 ntBASIC1.78□□□□□ -2.12
CDR1P51861 RNU7-62P-201ENST00000458856 62 ntBASIC1.78□□□□□ -2.12
CDR1P51861 Y_RNA.648-201ENST00000459455 110 ntBASIC1.78□□□□□ -2.12
CDR1P51861 AP003716.2-201ENST00000528260 108 ntBASIC1.78□□□□□ -2.12
CDR1P51861 MIR4285-201ENST00000581001 85 ntBASIC1.78□□□□□ -2.12
CDR1P51861 AL645939.4-201ENST00000604495 135 ntBASIC1.78□□□□□ -2.12
CDR1P51861 AL359821.1-201ENST00000605519 182 ntBASIC1.78□□□□□ -2.12
CDR1P51861 AC103810.8-201ENST00000607347 118 ntBASIC1.78□□□□□ -2.12
CDR1P51861 MIR8070-201ENST00000616510 88 ntBASIC1.78□□□□□ -2.12
CDR1P51861 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CDR1P51861 Y_RNA.355-201ENST00000365462 98 ntBASIC1.77□□□□□ -2.13
CDR1P51861 MIR499A-201ENST00000384903 122 ntBASIC1.77□□□□□ -2.13
CDR1P51861 MT-TF-201ENST00000387314 71 ntBASIC1.77□□□□□ -2.13
CDR1P51861 RNU6-205P-201ENST00000390858 107 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 213.8 ms