Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 MIR573-201ENST00000384964 99 ntBASIC1.07□□□□□ -2.24
CNGA1P29973 TMSB4XP3-201ENST00000445144 114 ntBASIC1.07□□□□□ -2.24
CNGA1P29973 FAM71BP1-201ENST00000604431 523 ntBASIC1.07□□□□□ -2.24
CNGA1P29973 MIR605-201ENST00000385078 83 ntBASIC1.06□□□□□ -2.24
CNGA1P29973 AC244098.3-201ENST00000424803 96 ntBASIC1.06□□□□□ -2.24
CNGA1P29973 RNU7-107P-201ENST00000459121 61 ntBASIC1.06□□□□□ -2.24
CNGA1P29973 AC090897.1-201ENST00000580909 226 ntBASIC1.06□□□□□ -2.24
CNGA1P29973 AC087741.2-201ENST00000619415 172 ntBASIC1.06□□□□□ -2.24
CNGA1P29973 SNORD115-19-201ENST00000363098 82 ntBASIC1.05□□□□□ -2.24
CNGA1P29973 RNU6-403P-201ENST00000363163 104 ntBASIC1.05□□□□□ -2.24
CNGA1P29973 SNORD115-18-201ENST00000363293 82 ntBASIC1.05□□□□□ -2.24
CNGA1P29973 SNORD115-17-201ENST00000364612 82 ntBASIC1.05□□□□□ -2.24
CNGA1P29973 MIR759-201ENST00000390224 91 ntBASIC1.05□□□□□ -2.24
CNGA1P29973 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
CNGA1P29973 RNU7-6P-201ENST00000516845 62 ntBASIC1.05□□□□□ -2.24
CNGA1P29973 RNU6-1234P-201ENST00000516877 103 ntBASIC1.05□□□□□ -2.24
CNGA1P29973 RNU6-765P-201ENST00000516916 99 ntBASIC1.05□□□□□ -2.24
CNGA1P29973 MIR6082-201ENST00000613604 109 ntBASIC1.05□□□□□ -2.24
CNGA1P29973 MTND5P18-201ENST00000445624 1801 ntBASIC1.04□□□□□ -2.24
CNGA1P29973 Y_RNA.13-201ENST00000362403 112 ntBASIC1.04□□□□□ -2.24
CNGA1P29973 Y_RNA.71-201ENST00000362892 104 ntBASIC1.04□□□□□ -2.24
CNGA1P29973 RNU6-81P-201ENST00000365608 104 ntBASIC1.04□□□□□ -2.24
CNGA1P29973 MIR206-201ENST00000384872 86 ntBASIC1.04□□□□□ -2.24
CNGA1P29973 RNU6-735P-201ENST00000410612 107 ntBASIC1.04□□□□□ -2.24
CNGA1P29973 Y_RNA.630-201ENST00000411370 108 ntBASIC1.04□□□□□ -2.24
CNGA1P29973 RPL39P28-201ENST00000465655 155 ntBASIC1.04□□□□□ -2.24
CNGA1P29973 Y_RNA.712-201ENST00000517011 92 ntBASIC1.04□□□□□ -2.24
CNGA1P29973 AC011195.1-201ENST00000578177 177 ntBASIC1.04□□□□□ -2.24
CNGA1P29973 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
CNGA1P29973 AL157777.2-201ENST00000258070 137 ntBASIC1.03□□□□□ -2.24
CNGA1P29973 Y_RNA.346-201ENST00000365385 112 ntBASIC1.03□□□□□ -2.24
CNGA1P29973 RNU6-616P-201ENST00000384353 107 ntBASIC1.03□□□□□ -2.24
CNGA1P29973 AC133485.1-201ENST00000567176 124 ntBASIC1.03□□□□□ -2.24
CNGA1P29973 Y_RNA.525-201ENST00000384570 113 ntBASIC1.02□□□□□ -2.25
CNGA1P29973 RNU6-659P-201ENST00000516454 104 ntBASIC1.02□□□□□ -2.25
CNGA1P29973 AP003327.1-201ENST00000529684 127 ntBASIC1.02□□□□□ -2.25
CNGA1P29973 AC138749.4-201ENST00000563970 127 ntBASIC1.02□□□□□ -2.25
CNGA1P29973 MIR4714-201ENST00000580728 77 ntBASIC1.02□□□□□ -2.25
CNGA1P29973 AC105081.1-201ENST00000617727 106 ntBASIC1.02□□□□□ -2.25
CNGA1P29973 SNORD116-14-201ENST00000383894 92 ntBASIC1.01□□□□□ -2.25
CNGA1P29973 SNORD116-17-201ENST00000383929 92 ntBASIC1.01□□□□□ -2.25
CNGA1P29973 SNORD116-15-201ENST00000384445 92 ntBASIC1.01□□□□□ -2.25
CNGA1P29973 SNORA72.6-201ENST00000384520 129 ntBASIC1.01□□□□□ -2.25
CNGA1P29973 RNU6-959P-201ENST00000384671 107 ntBASIC1.01□□□□□ -2.25
CNGA1P29973 SNORD116-19-201ENST00000384729 92 ntBASIC1.01□□□□□ -2.25
CNGA1P29973 RNU6-1321P-201ENST00000390905 107 ntBASIC1.01□□□□□ -2.25
CNGA1P29973 SNORD100-201ENST00000408573 76 ntBASIC1.01□□□□□ -2.25
CNGA1P29973 RNU7-2P-201ENST00000516096 62 ntBASIC1.01□□□□□ -2.25
CNGA1P29973 SNORA25.16-201ENST00000516741 121 ntBASIC1.01□□□□□ -2.25
CNGA1P29973 RNU6-448P-201ENST00000517052 107 ntBASIC1.01□□□□□ -2.25
CNGA1P29973 U6.109-201ENST00000636749 87 ntBASIC1.01□□□□□ -2.25
CNGA1P29973 MIR3914-2-201ENST00000637339 95 ntBASIC1.01□□□□□ -2.25
CNGA1P29973 RNA5SP133-201ENST00000363368 119 ntBASIC1□□□□□ -2.25
CNGA1P29973 RNY1P2-201ENST00000364820 117 ntBASIC1□□□□□ -2.25
CNGA1P29973 MIR548D2-201ENST00000384955 97 ntBASIC1□□□□□ -2.25
CNGA1P29973 PSMC1P5-201ENST00000512850 177 ntBASIC1□□□□□ -2.25
CNGA1P29973 Y_RNA.374-201ENST00000365606 101 ntBASIC0.99□□□□□ -2.25
CNGA1P29973 RNU6-1194P-201ENST00000516208 104 ntBASIC0.99□□□□□ -2.25
CNGA1P29973 Y_RNA.773-201ENST00000607168 90 ntBASIC0.99□□□□□ -2.25
CNGA1P29973 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.98□□□□□ -2.25
CNGA1P29973 SNORD115-35-201ENST00000365122 82 ntBASIC0.98□□□□□ -2.25
CNGA1P29973 Y_RNA.448-201ENST00000384185 108 ntBASIC0.98□□□□□ -2.25
CNGA1P29973 RNU7-48P-201ENST00000458875 63 ntBASIC0.98□□□□□ -2.25
CNGA1P29973 AC002350.1-201ENST00000490759 375 ntBASIC0.98□□□□□ -2.25
CNGA1P29973 MIR3612-201ENST00000579753 87 ntBASIC0.98□□□□□ -2.25
CNGA1P29973 MIR3910-1-201ENST00000580936 111 ntBASIC0.98□□□□□ -2.25
CNGA1P29973 RNU4-58P-201ENST00000363192 141 ntBASIC0.97□□□□□ -2.25
CNGA1P29973 Y_RNA.127-201ENST00000363386 109 ntBASIC0.97□□□□□ -2.25
CNGA1P29973 RNY4P6-201ENST00000363667 96 ntBASIC0.97□□□□□ -2.25
CNGA1P29973 RNU6-110P-201ENST00000384508 104 ntBASIC0.97□□□□□ -2.25
CNGA1P29973 RNU6-1307P-201ENST00000391012 103 ntBASIC0.97□□□□□ -2.25
CNGA1P29973 RNU6-531P-201ENST00000516694 104 ntBASIC0.97□□□□□ -2.25
CNGA1P29973 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.97□□□□□ -2.25
CNGA1P29973 DEFB131E-201ENST00000532329 154 ntBASIC0.96□□□□□ -2.26
CNGA1P29973 AC138907.6-201ENST00000568401 126 ntBASIC0.96□□□□□ -2.26
CNGA1P29973 Y_RNA.119-201ENST00000363301 96 ntBASIC0.95□□□□□ -2.26
CNGA1P29973 RNU4-45P-201ENST00000365469 141 ntBASIC0.95□□□□□ -2.26
CNGA1P29973 MIR193B-201ENST00000384907 83 ntBASIC0.95□□□□□ -2.26
CNGA1P29973 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.95□□□□□ -2.26
CNGA1P29973 MIR1255B1-201ENST00000636325 63 ntBASIC0.95□□□□□ -2.26
CNGA1P29973 U6.95-201ENST00000636931 70 ntBASIC0.95□□□□□ -2.26
CNGA1P29973 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
CNGA1P29973 Y_RNA.98-201ENST00000363109 102 ntBASIC0.94□□□□□ -2.26
CNGA1P29973 RNA5SP222-201ENST00000411039 105 ntBASIC0.94□□□□□ -2.26
CNGA1P29973 AC004941.2-201ENST00000427009 228 ntBASIC0.94□□□□□ -2.26
CNGA1P29973 RNU6-1333P-201ENST00000516162 93 ntBASIC0.94□□□□□ -2.26
CNGA1P29973 MIR4653-201ENST00000585107 83 ntBASIC0.94□□□□□ -2.26
CNGA1P29973 AC013244.2-201ENST00000603396 103 ntBASIC0.94□□□□□ -2.26
CNGA1P29973 AC132825.6-201ENST00000638861 357 ntBASIC0.94□□□□□ -2.26
CNGA1P29973 MIR18A-201ENST00000362310 71 ntBASIC0.93□□□□□ -2.26
CNGA1P29973 Y_RNA.30-201ENST00000362572 97 ntBASIC0.93□□□□□ -2.26
CNGA1P29973 Y_RNA.328-201ENST00000365208 113 ntBASIC0.93□□□□□ -2.26
CNGA1P29973 Y_RNA.344-201ENST00000365381 112 ntBASIC0.93□□□□□ -2.26
CNGA1P29973 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.93□□□□□ -2.26
CNGA1P29973 MIR6513-201ENST00000621188 64 ntBASIC0.93□□□□□ -2.26
CNGA1P29973 MIR6835-201ENST00000621552 64 ntBASIC0.93□□□□□ -2.26
CNGA1P29973 AP001362.1-201ENST00000625165 124 ntBASIC0.93□□□□□ -2.26
CNGA1P29973 RNU6-865P-201ENST00000364772 107 ntBASIC0.92□□□□□ -2.26
CNGA1P29973 RNU6-429P-201ENST00000384582 108 ntBASIC0.92□□□□□ -2.26
CNGA1P29973 Y_RNA.536-201ENST00000384621 113 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 297.1 ms