Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 MIRLET7G-201ENST00000362280 84 ntBASIC2.18□□□□□ -2.06
HOXD8P13378 RNU4-32P-201ENST00000363404 141 ntBASIC2.18□□□□□ -2.06
HOXD8P13378 Y_RNA.565-201ENST00000384719 101 ntBASIC2.18□□□□□ -2.06
HOXD8P13378 MIR518E-201ENST00000385252 88 ntBASIC2.18□□□□□ -2.06
HOXD8P13378 AC244636.1-201ENST00000421152 228 ntBASIC2.18□□□□□ -2.06
HOXD8P13378 AC023790.1-201ENST00000482174 347 ntBASIC2.18□□□□□ -2.06
HOXD8P13378 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.18□□□□□ -2.06
HOXD8P13378 MIR8074-201ENST00000615081 81 ntBASIC2.18□□□□□ -2.06
HOXD8P13378 MIR6740-201ENST00000618268 113 ntBASIC2.18□□□□□ -2.06
HOXD8P13378 Y_RNA.119-201ENST00000363301 96 ntBASIC2.17□□□□□ -2.06
HOXD8P13378 RNU6-1229P-201ENST00000364295 107 ntBASIC2.17□□□□□ -2.06
HOXD8P13378 RNU6-129P-201ENST00000391022 107 ntBASIC2.17□□□□□ -2.06
HOXD8P13378 BX276092.1-201ENST00000427368 251 ntBASIC2.17□□□□□ -2.06
HOXD8P13378 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
HOXD8P13378 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
HOXD8P13378 AL596028.1-201ENST00000326971 197 ntBASIC2.16□□□□□ -2.06
HOXD8P13378 MIR103A2-201ENST00000362154 78 ntBASIC2.16□□□□□ -2.06
HOXD8P13378 RNU6-53P-201ENST00000365367 106 ntBASIC2.16□□□□□ -2.06
HOXD8P13378 SNORA40.18-201ENST00000391200 128 ntBASIC2.16□□□□□ -2.06
HOXD8P13378 RN7SL274P-201ENST00000492268 272 ntBASIC2.16□□□□□ -2.06
HOXD8P13378 RNU6-850P-201ENST00000516934 103 ntBASIC2.16□□□□□ -2.06
HOXD8P13378 AL773524.1-201ENST00000614065 229 ntBASIC2.16□□□□□ -2.06
HOXD8P13378 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.16□□□□□ -2.06
HOXD8P13378 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
HOXD8P13378 MIR337-201ENST00000362281 93 ntBASIC2.15□□□□□ -2.07
HOXD8P13378 SNRPGP12-201ENST00000449481 213 ntBASIC2.15□□□□□ -2.07
HOXD8P13378 AC114801.3-201ENST00000510231 177 ntBASIC2.15□□□□□ -2.07
HOXD8P13378 AC015688.6-201ENST00000577737 104 ntBASIC2.15□□□□□ -2.07
HOXD8P13378 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
HOXD8P13378 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
HOXD8P13378 RNU6-571P-201ENST00000384128 107 ntBASIC2.14□□□□□ -2.07
HOXD8P13378 SNORA72.6-201ENST00000384520 129 ntBASIC2.14□□□□□ -2.07
HOXD8P13378 MIR17-201ENST00000385012 84 ntBASIC2.14□□□□□ -2.07
HOXD8P13378 RNU4-83P-201ENST00000410863 133 ntBASIC2.14□□□□□ -2.07
HOXD8P13378 RNU6-557P-201ENST00000516842 110 ntBASIC2.14□□□□□ -2.07
HOXD8P13378 MIR4255-201ENST00000579351 72 ntBASIC2.14□□□□□ -2.07
HOXD8P13378 MIR378A-201ENST00000362177 66 ntBASIC2.13□□□□□ -2.07
HOXD8P13378 MIR563-201ENST00000385080 79 ntBASIC2.13□□□□□ -2.07
HOXD8P13378 MT-TF-201ENST00000387314 71 ntBASIC2.13□□□□□ -2.07
HOXD8P13378 MIR889-201ENST00000401280 79 ntBASIC2.13□□□□□ -2.07
HOXD8P13378 MIR1302-7-201ENST00000408841 72 ntBASIC2.13□□□□□ -2.07
HOXD8P13378 Y_RNA.660-201ENST00000516002 120 ntBASIC2.13□□□□□ -2.07
HOXD8P13378 AC019176.1-201ENST00000518519 225 ntBASIC2.13□□□□□ -2.07
HOXD8P13378 MIR4713-201ENST00000582691 75 ntBASIC2.13□□□□□ -2.07
HOXD8P13378 SNRPGP19-201ENST00000603826 189 ntBASIC2.13□□□□□ -2.07
HOXD8P13378 AL512598.1-201ENST00000610158 273 ntBASIC2.13□□□□□ -2.07
HOXD8P13378 AP000553.5-201ENST00000641933 54 ntBASIC2.13□□□□□ -2.07
HOXD8P13378 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.13□□□□□ -2.07
HOXD8P13378 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HOXD8P13378 MIR30D-201ENST00000362283 70 ntBASIC2.12□□□□□ -2.07
HOXD8P13378 RNU6-624P-201ENST00000363411 107 ntBASIC2.12□□□□□ -2.07
HOXD8P13378 SNORA25.9-201ENST00000365087 128 ntBASIC2.12□□□□□ -2.07
HOXD8P13378 MIR9-3-201ENST00000385084 90 ntBASIC2.12□□□□□ -2.07
HOXD8P13378 MT-TN-201ENST00000387400 73 ntBASIC2.12□□□□□ -2.07
HOXD8P13378 snoU13.9-201ENST00000458927 103 ntBASIC2.12□□□□□ -2.07
HOXD8P13378 AC025033.1-201ENST00000463883 194 ntBASIC2.12□□□□□ -2.07
HOXD8P13378 SNORA16B-201ENST00000364674 135 ntBASIC2.11□□□□□ -2.07
HOXD8P13378 RNA5SP160-201ENST00000364866 120 ntBASIC2.11□□□□□ -2.07
HOXD8P13378 MIR7-2-201ENST00000384970 110 ntBASIC2.11□□□□□ -2.07
HOXD8P13378 SNORD93-201ENST00000408813 74 ntBASIC2.11□□□□□ -2.07
HOXD8P13378 AC079804.2-201ENST00000490376 200 ntBASIC2.11□□□□□ -2.07
HOXD8P13378 RNU6-871P-201ENST00000516122 100 ntBASIC2.11□□□□□ -2.07
HOXD8P13378 SNORA25.13-201ENST00000516395 103 ntBASIC2.11□□□□□ -2.07
HOXD8P13378 MIR514B-201ENST00000516774 80 ntBASIC2.11□□□□□ -2.07
HOXD8P13378 SNORA77B-201ENST00000578179 125 ntBASIC2.11□□□□□ -2.07
HOXD8P13378 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.11□□□□□ -2.07
HOXD8P13378 MIR6516-201ENST00000630554 81 ntBASIC2.11□□□□□ -2.07
HOXD8P13378 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
HOXD8P13378 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
HOXD8P13378 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
HOXD8P13378 RNA5SP95-201ENST00000410319 137 ntBASIC2.1□□□□□ -2.07
HOXD8P13378 AC003989.2-201ENST00000440224 169 ntBASIC2.1□□□□□ -2.07
HOXD8P13378 AC087499.7-201ENST00000441958 109 ntBASIC2.1□□□□□ -2.07
HOXD8P13378 snoU13.18-201ENST00000459483 104 ntBASIC2.1□□□□□ -2.07
HOXD8P13378 AL133373.1-201ENST00000497098 94 ntBASIC2.1□□□□□ -2.07
HOXD8P13378 RNU6-250P-201ENST00000516958 103 ntBASIC2.1□□□□□ -2.07
HOXD8P13378 MIR3937-201ENST00000580135 106 ntBASIC2.1□□□□□ -2.07
HOXD8P13378 AL359821.1-201ENST00000605519 182 ntBASIC2.1□□□□□ -2.07
HOXD8P13378 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.1□□□□□ -2.07
HOXD8P13378 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
HOXD8P13378 RNU6-403P-201ENST00000363163 104 ntBASIC2.09□□□□□ -2.07
HOXD8P13378 snoU13.11-201ENST00000459219 104 ntBASIC2.09□□□□□ -2.07
HOXD8P13378 RPL30P7-201ENST00000479312 323 ntBASIC2.09□□□□□ -2.07
HOXD8P13378 RNU7-153P-201ENST00000516455 62 ntBASIC2.09□□□□□ -2.07
HOXD8P13378 RNU6-539P-201ENST00000516665 103 ntBASIC2.09□□□□□ -2.07
HOXD8P13378 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.09□□□□□ -2.07
HOXD8P13378 MIR4299-201ENST00000577899 72 ntBASIC2.09□□□□□ -2.07
HOXD8P13378 RNA5SP264-201ENST00000363115 107 ntBASIC2.08□□□□□ -2.08
HOXD8P13378 RNU4-58P-201ENST00000363192 141 ntBASIC2.08□□□□□ -2.08
HOXD8P13378 RNA5SP37-201ENST00000365420 130 ntBASIC2.08□□□□□ -2.08
HOXD8P13378 RNU6-1065P-201ENST00000384513 106 ntBASIC2.08□□□□□ -2.08
HOXD8P13378 Y_RNA.540-201ENST00000384638 111 ntBASIC2.08□□□□□ -2.08
HOXD8P13378 RNU6-243P-201ENST00000391140 107 ntBASIC2.08□□□□□ -2.08
HOXD8P13378 RNA5SP338-201ENST00000410495 85 ntBASIC2.08□□□□□ -2.08
HOXD8P13378 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.08□□□□□ -2.08
HOXD8P13378 SNORD4B-201ENST00000459083 72 ntBASIC2.08□□□□□ -2.08
HOXD8P13378 RNA5SP233-201ENST00000459153 113 ntBASIC2.08□□□□□ -2.08
HOXD8P13378 Y_RNA.648-201ENST00000459455 110 ntBASIC2.08□□□□□ -2.08
HOXD8P13378 TRMT112P2-201ENST00000512910 132 ntBASIC2.08□□□□□ -2.08
HOXD8P13378 RNU11-2P-201ENST00000516898 142 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms