Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC091304.10-201ENST00000641554 121 ntBASIC1.15□□□□□ -2.23
LDLRP01130 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.23
LDLRP01130 Y_RNA.93-201ENST00000363066 109 ntBASIC1.14□□□□□ -2.23
LDLRP01130 SNORD73B-201ENST00000364394 72 ntBASIC1.14□□□□□ -2.23
LDLRP01130 Y_RNA.342-201ENST00000365352 113 ntBASIC1.14□□□□□ -2.23
LDLRP01130 RNU6-1201P-201ENST00000384227 107 ntBASIC1.14□□□□□ -2.23
LDLRP01130 RNU6-1067P-201ENST00000384752 107 ntBASIC1.14□□□□□ -2.23
LDLRP01130 Y_RNA.601-201ENST00000410500 113 ntBASIC1.14□□□□□ -2.23
LDLRP01130 RNU6-1054P-201ENST00000411293 104 ntBASIC1.14□□□□□ -2.23
LDLRP01130 AC244023.1-201ENST00000426884 112 ntBASIC1.14□□□□□ -2.23
LDLRP01130 AL133373.1-201ENST00000497098 94 ntBASIC1.14□□□□□ -2.23
LDLRP01130 UBL5P1-201ENST00000507979 193 ntBASIC1.14□□□□□ -2.23
LDLRP01130 SCARNA23-201ENST00000516060 130 ntBASIC1.14□□□□□ -2.23
LDLRP01130 RNU6-795P-201ENST00000516323 103 ntBASIC1.14□□□□□ -2.23
LDLRP01130 AC242498.1-201ENST00000604134 111 ntBASIC1.14□□□□□ -2.23
LDLRP01130 MIR4251-201ENST00000635819 61 ntBASIC1.14□□□□□ -2.23
LDLRP01130 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.13□□□□□ -2.23
LDLRP01130 Y_RNA.247-201ENST00000364500 92 ntBASIC1.13□□□□□ -2.23
LDLRP01130 RNU6-294P-201ENST00000364999 102 ntBASIC1.13□□□□□ -2.23
LDLRP01130 SNORD115-35-201ENST00000365122 82 ntBASIC1.13□□□□□ -2.23
LDLRP01130 SNORA18-201ENST00000384416 132 ntBASIC1.13□□□□□ -2.23
LDLRP01130 RNU7-40P-201ENST00000516397 64 ntBASIC1.13□□□□□ -2.23
LDLRP01130 SNORA70.22-201ENST00000517160 124 ntBASIC1.13□□□□□ -2.23
LDLRP01130 MIR4777-201ENST00000583710 86 ntBASIC1.13□□□□□ -2.23
LDLRP01130 RNU6-1313P-201ENST00000362622 102 ntBASIC1.12□□□□□ -2.23
LDLRP01130 RNU6-170P-201ENST00000362832 104 ntBASIC1.12□□□□□ -2.23
LDLRP01130 Y_RNA.107-201ENST00000363190 121 ntBASIC1.12□□□□□ -2.23
LDLRP01130 RNU4-36P-201ENST00000364294 144 ntBASIC1.12□□□□□ -2.23
LDLRP01130 Y_RNA.363-201ENST00000365529 113 ntBASIC1.12□□□□□ -2.23
LDLRP01130 Y_RNA.377-201ENST00000365644 108 ntBASIC1.12□□□□□ -2.23
LDLRP01130 SNORD77B-201ENST00000391112 67 ntBASIC1.12□□□□□ -2.23
LDLRP01130 AL591704.2-201ENST00000421658 181 ntBASIC1.12□□□□□ -2.23
LDLRP01130 RNU6-1018P-201ENST00000516577 106 ntBASIC1.12□□□□□ -2.23
LDLRP01130 RNU6-1006P-201ENST00000516998 103 ntBASIC1.12□□□□□ -2.23
LDLRP01130 RNU6-762P-201ENST00000517107 102 ntBASIC1.12□□□□□ -2.23
LDLRP01130 RNU6-844P-201ENST00000517175 102 ntBASIC1.12□□□□□ -2.23
LDLRP01130 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.12□□□□□ -2.23
LDLRP01130 FAM71BP1-201ENST00000604431 523 ntBASIC1.12□□□□□ -2.23
LDLRP01130 MALAT1.1-201ENST00000618249 95 ntBASIC1.12□□□□□ -2.23
LDLRP01130 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.12□□□□□ -2.23
LDLRP01130 Y_RNA.290-201ENST00000364879 114 ntBASIC1.11□□□□□ -2.23
LDLRP01130 SNORA25-201ENST00000384384 134 ntBASIC1.11□□□□□ -2.23
LDLRP01130 MIR206-201ENST00000384872 86 ntBASIC1.11□□□□□ -2.23
LDLRP01130 RNU6-644P-201ENST00000391155 98 ntBASIC1.11□□□□□ -2.23
LDLRP01130 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.11□□□□□ -2.23
LDLRP01130 AC096949.1-201ENST00000412047 152 ntBASIC1.11□□□□□ -2.23
LDLRP01130 OR2A41P-201ENST00000473586 105 ntBASIC1.11□□□□□ -2.23
LDLRP01130 RNU7-79P-201ENST00000516082 62 ntBASIC1.11□□□□□ -2.23
LDLRP01130 RNU7-2P-201ENST00000516096 62 ntBASIC1.11□□□□□ -2.23
LDLRP01130 SNORD67.1-201ENST00000516618 108 ntBASIC1.11□□□□□ -2.23
LDLRP01130 AP003716.2-201ENST00000528260 108 ntBASIC1.11□□□□□ -2.23
LDLRP01130 AL442128.1-201ENST00000615151 90 ntBASIC1.11□□□□□ -2.23
LDLRP01130 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.11□□□□□ -2.23
LDLRP01130 RNY1P13-201ENST00000365030 105 ntBASIC1.1□□□□□ -2.23
LDLRP01130 Y_RNA.388-201ENST00000383919 113 ntBASIC1.1□□□□□ -2.23
LDLRP01130 AC004941.2-201ENST00000427009 228 ntBASIC1.1□□□□□ -2.23
LDLRP01130 RNU7-61P-201ENST00000515897 61 ntBASIC1.1□□□□□ -2.23
LDLRP01130 SNORA72.7-201ENST00000516349 94 ntBASIC1.1□□□□□ -2.23
LDLRP01130 RNU7-137P-201ENST00000516788 62 ntBASIC1.1□□□□□ -2.23
LDLRP01130 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
LDLRP01130 MIR103A2-201ENST00000362154 78 ntBASIC1.09□□□□□ -2.23
LDLRP01130 RNA5SP264-201ENST00000363115 107 ntBASIC1.09□□□□□ -2.23
LDLRP01130 RNA5SP48-201ENST00000363969 126 ntBASIC1.09□□□□□ -2.23
LDLRP01130 Y_RNA.467-201ENST00000384297 102 ntBASIC1.09□□□□□ -2.23
LDLRP01130 SNORD38B-201ENST00000384690 67 ntBASIC1.09□□□□□ -2.23
LDLRP01130 RNU6-1237P-201ENST00000384777 107 ntBASIC1.09□□□□□ -2.23
LDLRP01130 MIR34C-201ENST00000384831 77 ntBASIC1.09□□□□□ -2.23
LDLRP01130 RNU6-1321P-201ENST00000390905 107 ntBASIC1.09□□□□□ -2.23
LDLRP01130 RNU6-1086P-201ENST00000410930 100 ntBASIC1.09□□□□□ -2.23
LDLRP01130 MRPL35P3-201ENST00000421557 364 ntBASIC1.09□□□□□ -2.23
LDLRP01130 RNA5SP436-201ENST00000516020 115 ntBASIC1.09□□□□□ -2.23
LDLRP01130 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.09□□□□□ -2.23
LDLRP01130 MIR376B-201ENST00000614515 100 ntBASIC1.09□□□□□ -2.23
LDLRP01130 AC105081.1-201ENST00000617727 106 ntBASIC1.09□□□□□ -2.23
LDLRP01130 SNORD38B-202ENST00000625943 69 ntBASIC1.09□□□□□ -2.23
LDLRP01130 MIR2052-201ENST00000636055 55 ntBASIC1.09□□□□□ -2.23
LDLRP01130 AL512310.12-203ENST00000640543 90 ntBASIC1.09□□□□□ -2.23
LDLRP01130 Y_RNA.10-201ENST00000362371 110 ntBASIC1.08□□□□□ -2.24
LDLRP01130 Y_RNA.95-201ENST00000363079 95 ntBASIC1.08□□□□□ -2.24
LDLRP01130 Y_RNA.330-201ENST00000365230 109 ntBASIC1.08□□□□□ -2.24
LDLRP01130 MIR563-201ENST00000385080 79 ntBASIC1.08□□□□□ -2.24
LDLRP01130 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.08□□□□□ -2.24
LDLRP01130 MIR1185-1-201ENST00000408598 86 ntBASIC1.08□□□□□ -2.24
LDLRP01130 RPS29P28-201ENST00000446439 141 ntBASIC1.08□□□□□ -2.24
LDLRP01130 AC109327.2-201ENST00000448339 378 ntBASIC1.08□□□□□ -2.24
LDLRP01130 SNORD79.1-201ENST00000516069 84 ntBASIC1.08□□□□□ -2.24
LDLRP01130 RNU6-162P-201ENST00000516228 103 ntBASIC1.08□□□□□ -2.24
LDLRP01130 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.08□□□□□ -2.24
LDLRP01130 AC141846.1-201ENST00000568348 142 ntBASIC1.08□□□□□ -2.24
LDLRP01130 AC062037.1-201ENST00000605302 128 ntBASIC1.08□□□□□ -2.24
LDLRP01130 uc_338.6-201ENST00000613544 171 ntBASIC1.08□□□□□ -2.24
LDLRP01130 U7.3-201ENST00000616123 62 ntBASIC1.08□□□□□ -2.24
LDLRP01130 SEPT14P17-201ENST00000617978 177 ntBASIC1.08□□□□□ -2.24
LDLRP01130 SNORD114-10-201ENST00000363409 72 ntBASIC1.07□□□□□ -2.24
LDLRP01130 Y_RNA.220-201ENST00000364244 109 ntBASIC1.07□□□□□ -2.24
LDLRP01130 RNU6-1163P-201ENST00000364516 107 ntBASIC1.07□□□□□ -2.24
LDLRP01130 Y_RNA.448-201ENST00000384185 108 ntBASIC1.07□□□□□ -2.24
LDLRP01130 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
LDLRP01130 SNORA75.2-201ENST00000391138 150 ntBASIC1.07□□□□□ -2.24
LDLRP01130 SNORA75.3-201ENST00000391231 150 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 165.7 ms