Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 MIR563-201ENST00000385080 79 ntBASIC1.66□□□□□ -2.14
CNOT4O95628 SUMO2P12-201ENST00000405924 140 ntBASIC1.66□□□□□ -2.14
CNOT4O95628 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.66□□□□□ -2.14
CNOT4O95628 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.66□□□□□ -2.14
CNOT4O95628 RPS29P11-201ENST00000496507 171 ntBASIC1.66□□□□□ -2.14
CNOT4O95628 RNU6-638P-201ENST00000516582 104 ntBASIC1.66□□□□□ -2.14
CNOT4O95628 MIR2115-201ENST00000516657 100 ntBASIC1.66□□□□□ -2.14
CNOT4O95628 AP000753.3-201ENST00000604083 169 ntBASIC1.66□□□□□ -2.14
CNOT4O95628 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.66□□□□□ -2.14
CNOT4O95628 HSBP1P2-201ENST00000299671 229 ntBASIC1.65□□□□□ -2.15
CNOT4O95628 RNU6-1124P-201ENST00000384169 107 ntBASIC1.65□□□□□ -2.15
CNOT4O95628 MT-TN-201ENST00000387400 73 ntBASIC1.65□□□□□ -2.15
CNOT4O95628 snoU13.25-201ENST00000458945 104 ntBASIC1.65□□□□□ -2.15
CNOT4O95628 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.65□□□□□ -2.15
CNOT4O95628 MIR5588-201ENST00000581890 63 ntBASIC1.65□□□□□ -2.15
CNOT4O95628 SNORA4-201ENST00000584302 138 ntBASIC1.65□□□□□ -2.15
CNOT4O95628 MIR6740-201ENST00000618268 113 ntBASIC1.65□□□□□ -2.15
CNOT4O95628 Y_RNA.168-201ENST00000363740 102 ntBASIC1.64□□□□□ -2.15
CNOT4O95628 RNU6-979P-201ENST00000383896 107 ntBASIC1.64□□□□□ -2.15
CNOT4O95628 SNORA17.3-201ENST00000391159 129 ntBASIC1.64□□□□□ -2.15
CNOT4O95628 Y_RNA.609-201ENST00000410669 89 ntBASIC1.64□□□□□ -2.15
CNOT4O95628 RPS27P16-201ENST00000425758 201 ntBASIC1.64□□□□□ -2.15
CNOT4O95628 SNORA25.15-201ENST00000516487 89 ntBASIC1.64□□□□□ -2.15
CNOT4O95628 MIR4255-201ENST00000579351 72 ntBASIC1.64□□□□□ -2.15
CNOT4O95628 SNRPGP19-201ENST00000603826 189 ntBASIC1.64□□□□□ -2.15
CNOT4O95628 RNU6-228P-201ENST00000362700 106 ntBASIC1.63□□□□□ -2.15
CNOT4O95628 Y_RNA.118-201ENST00000363300 101 ntBASIC1.63□□□□□ -2.15
CNOT4O95628 RNU6-1125P-201ENST00000363601 107 ntBASIC1.63□□□□□ -2.15
CNOT4O95628 RNA5SP190-201ENST00000365222 118 ntBASIC1.63□□□□□ -2.15
CNOT4O95628 RNU6-480P-201ENST00000384332 107 ntBASIC1.63□□□□□ -2.15
CNOT4O95628 SNORA2B-201ENST00000384583 137 ntBASIC1.63□□□□□ -2.15
CNOT4O95628 RNU6-997P-201ENST00000384725 107 ntBASIC1.63□□□□□ -2.15
CNOT4O95628 RNU6-205P-201ENST00000390858 107 ntBASIC1.63□□□□□ -2.15
CNOT4O95628 RNU6-1165P-201ENST00000410119 107 ntBASIC1.63□□□□□ -2.15
CNOT4O95628 RNU7-62P-201ENST00000458856 62 ntBASIC1.63□□□□□ -2.15
CNOT4O95628 RPL30P7-201ENST00000479312 323 ntBASIC1.63□□□□□ -2.15
CNOT4O95628 AL133373.1-201ENST00000497098 94 ntBASIC1.63□□□□□ -2.15
CNOT4O95628 AP003716.2-201ENST00000528260 108 ntBASIC1.63□□□□□ -2.15
CNOT4O95628 AL513043.2-201ENST00000573941 143 ntBASIC1.63□□□□□ -2.15
CNOT4O95628 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CNOT4O95628 MIR30D-201ENST00000362283 70 ntBASIC1.62□□□□□ -2.15
CNOT4O95628 MIR181B2-201ENST00000385004 89 ntBASIC1.62□□□□□ -2.15
CNOT4O95628 RPS29P23-201ENST00000458635 123 ntBASIC1.62□□□□□ -2.15
CNOT4O95628 RNU11-2P-201ENST00000516898 142 ntBASIC1.62□□□□□ -2.15
CNOT4O95628 AC138749.4-201ENST00000563970 127 ntBASIC1.62□□□□□ -2.15
CNOT4O95628 AC090897.1-201ENST00000580909 226 ntBASIC1.62□□□□□ -2.15
CNOT4O95628 MIR377-201ENST00000362145 69 ntBASIC1.61□□□□□ -2.15
CNOT4O95628 MIR103A2-201ENST00000362154 78 ntBASIC1.61□□□□□ -2.15
CNOT4O95628 RNU6-509P-201ENST00000363519 107 ntBASIC1.61□□□□□ -2.15
CNOT4O95628 MIR1185-1-201ENST00000408598 86 ntBASIC1.61□□□□□ -2.15
CNOT4O95628 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.61□□□□□ -2.15
CNOT4O95628 SNORD13-201ENST00000459299 104 ntBASIC1.61□□□□□ -2.15
CNOT4O95628 RNU7-171P-201ENST00000459581 62 ntBASIC1.61□□□□□ -2.15
CNOT4O95628 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.61□□□□□ -2.15
CNOT4O95628 AC020891.4-201ENST00000605745 93 ntBASIC1.61□□□□□ -2.15
CNOT4O95628 AC025521.1-201ENST00000621624 286 ntBASIC1.61□□□□□ -2.15
CNOT4O95628 MIR6516-201ENST00000630554 81 ntBASIC1.61□□□□□ -2.15
CNOT4O95628 U6.109-201ENST00000636749 87 ntBASIC1.61□□□□□ -2.15
CNOT4O95628 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CNOT4O95628 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.6□□□□□ -2.15
CNOT4O95628 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CNOT4O95628 RNU6-633P-201ENST00000362612 103 ntBASIC1.6□□□□□ -2.15
CNOT4O95628 RNA5SP264-201ENST00000363115 107 ntBASIC1.6□□□□□ -2.15
CNOT4O95628 Y_RNA.191-201ENST00000363972 113 ntBASIC1.6□□□□□ -2.15
CNOT4O95628 Y_RNA.426-201ENST00000384068 113 ntBASIC1.6□□□□□ -2.15
CNOT4O95628 MT-TF-201ENST00000387314 71 ntBASIC1.6□□□□□ -2.15
CNOT4O95628 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
CNOT4O95628 RNU6-613P-201ENST00000410412 108 ntBASIC1.6□□□□□ -2.15
CNOT4O95628 Y_RNA.611-201ENST00000410682 108 ntBASIC1.6□□□□□ -2.15
CNOT4O95628 SNRPGP12-201ENST00000449481 213 ntBASIC1.6□□□□□ -2.15
CNOT4O95628 RN7SKP88-201ENST00000516847 250 ntBASIC1.6□□□□□ -2.15
CNOT4O95628 AL512310.8-201ENST00000550183 120 ntBASIC1.6□□□□□ -2.15
CNOT4O95628 7SK.8-201ENST00000612110 250 ntBASIC1.6□□□□□ -2.15
CNOT4O95628 7SK.11-201ENST00000615477 250 ntBASIC1.6□□□□□ -2.15
CNOT4O95628 7SK.13-201ENST00000622040 250 ntBASIC1.6□□□□□ -2.15
CNOT4O95628 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CNOT4O95628 RNA5SP133-201ENST00000363368 119 ntBASIC1.59□□□□□ -2.15
CNOT4O95628 SNORA16.1-201ENST00000364597 132 ntBASIC1.59□□□□□ -2.15
CNOT4O95628 MIR1255A-201ENST00000408338 113 ntBASIC1.59□□□□□ -2.15
CNOT4O95628 RNA5SP225-201ENST00000410874 135 ntBASIC1.59□□□□□ -2.15
CNOT4O95628 RNU6-321P-201ENST00000410912 106 ntBASIC1.59□□□□□ -2.15
CNOT4O95628 AL161932.1-201ENST00000437408 146 ntBASIC1.59□□□□□ -2.15
CNOT4O95628 AC003989.2-201ENST00000440224 169 ntBASIC1.59□□□□□ -2.15
CNOT4O95628 MIR4500-201ENST00000579472 76 ntBASIC1.59□□□□□ -2.15
CNOT4O95628 AC084768.2-201ENST00000622736 221 ntBASIC1.59□□□□□ -2.15
CNOT4O95628 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.59□□□□□ -2.15
CNOT4O95628 MIR548BB-201ENST00000626714 66 ntBASIC1.59□□□□□ -2.15
CNOT4O95628 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.58□□□□□ -2.16
CNOT4O95628 Y_RNA.508-201ENST00000384502 114 ntBASIC1.58□□□□□ -2.16
CNOT4O95628 MIR9-3-201ENST00000385084 90 ntBASIC1.58□□□□□ -2.16
CNOT4O95628 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
CNOT4O95628 uc_338.6-201ENST00000613544 171 ntBASIC1.58□□□□□ -2.16
CNOT4O95628 AC006160.2-201ENST00000637708 154 ntBASIC1.58□□□□□ -2.16
CNOT4O95628 Y_RNA.119-201ENST00000363301 96 ntBASIC1.57□□□□□ -2.16
CNOT4O95628 RNU6-654P-201ENST00000364373 107 ntBASIC1.57□□□□□ -2.16
CNOT4O95628 RNU6-787P-201ENST00000384032 107 ntBASIC1.57□□□□□ -2.16
CNOT4O95628 RNU6-571P-201ENST00000384128 107 ntBASIC1.57□□□□□ -2.16
CNOT4O95628 TRMT112P2-201ENST00000512910 132 ntBASIC1.57□□□□□ -2.16
CNOT4O95628 MIR4666B-201ENST00000578142 81 ntBASIC1.57□□□□□ -2.16
CNOT4O95628 MIR3664-201ENST00000579074 99 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms