Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 MIR4303-201ENST00000581299 66 ntBASIC1.71□□□□□ -2.14
PRPF40AO75400 BX248123.2-201ENST00000606318 124 ntBASIC1.71□□□□□ -2.14
PRPF40AO75400 RNU6-403P-201ENST00000363163 104 ntBASIC1.7□□□□□ -2.14
PRPF40AO75400 MIR517C-201ENST00000385103 95 ntBASIC1.7□□□□□ -2.14
PRPF40AO75400 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
PRPF40AO75400 AC067940.1-201ENST00000458411 300 ntBASIC1.7□□□□□ -2.14
PRPF40AO75400 SNORD53B-201ENST00000577887 78 ntBASIC1.7□□□□□ -2.14
PRPF40AO75400 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.7□□□□□ -2.14
PRPF40AO75400 MIR7974-201ENST00000615835 79 ntBASIC1.7□□□□□ -2.14
PRPF40AO75400 Y_RNA.93-201ENST00000363066 109 ntBASIC1.69□□□□□ -2.14
PRPF40AO75400 RNU4-62P-201ENST00000410125 130 ntBASIC1.69□□□□□ -2.14
PRPF40AO75400 RNU4-83P-201ENST00000410863 133 ntBASIC1.69□□□□□ -2.14
PRPF40AO75400 AC015818.7-201ENST00000428754 109 ntBASIC1.69□□□□□ -2.14
PRPF40AO75400 AC087499.7-201ENST00000441958 109 ntBASIC1.69□□□□□ -2.14
PRPF40AO75400 SPINT5P-201ENST00000448174 155 ntBASIC1.69□□□□□ -2.14
PRPF40AO75400 RNU7-40P-201ENST00000516397 64 ntBASIC1.69□□□□□ -2.14
PRPF40AO75400 RNU6-1006P-201ENST00000516998 103 ntBASIC1.69□□□□□ -2.14
PRPF40AO75400 MIR4491-201ENST00000581087 68 ntBASIC1.69□□□□□ -2.14
PRPF40AO75400 Y_RNA.119-201ENST00000363301 96 ntBASIC1.68□□□□□ -2.14
PRPF40AO75400 Y_RNA.247-201ENST00000364500 92 ntBASIC1.68□□□□□ -2.14
PRPF40AO75400 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
PRPF40AO75400 RNU6-955P-201ENST00000410497 104 ntBASIC1.68□□□□□ -2.14
PRPF40AO75400 RPS26P5-201ENST00000418544 335 ntBASIC1.68□□□□□ -2.14
PRPF40AO75400 RNU6-795P-201ENST00000516323 103 ntBASIC1.68□□□□□ -2.14
PRPF40AO75400 MIR4500-201ENST00000579472 76 ntBASIC1.68□□□□□ -2.14
PRPF40AO75400 AC090897.1-201ENST00000580909 226 ntBASIC1.68□□□□□ -2.14
PRPF40AO75400 MIR4781-201ENST00000585250 76 ntBASIC1.68□□□□□ -2.14
PRPF40AO75400 RNU6-90P-201ENST00000606352 106 ntBASIC1.68□□□□□ -2.14
PRPF40AO75400 MIR2052-201ENST00000636055 55 ntBASIC1.68□□□□□ -2.14
PRPF40AO75400 MIR378A-201ENST00000362177 66 ntBASIC1.67□□□□□ -2.14
PRPF40AO75400 RNU6-170P-201ENST00000362832 104 ntBASIC1.67□□□□□ -2.14
PRPF40AO75400 MIR548G-201ENST00000408442 89 ntBASIC1.67□□□□□ -2.14
PRPF40AO75400 AC096949.1-201ENST00000412047 152 ntBASIC1.67□□□□□ -2.14
PRPF40AO75400 BTF3P4-201ENST00000418852 495 ntBASIC1.67□□□□□ -2.14
PRPF40AO75400 AC002429.1-201ENST00000437672 148 ntBASIC1.67□□□□□ -2.14
PRPF40AO75400 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
PRPF40AO75400 Y_RNA.95-201ENST00000363079 95 ntBASIC1.66□□□□□ -2.14
PRPF40AO75400 RNU4-58P-201ENST00000363192 141 ntBASIC1.66□□□□□ -2.14
PRPF40AO75400 Y_RNA.338-201ENST00000365320 114 ntBASIC1.66□□□□□ -2.14
PRPF40AO75400 Y_RNA.348-201ENST00000365403 103 ntBASIC1.66□□□□□ -2.14
PRPF40AO75400 SNORA67.6-201ENST00000391093 99 ntBASIC1.66□□□□□ -2.14
PRPF40AO75400 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.66□□□□□ -2.14
PRPF40AO75400 RNU6-158P-201ENST00000517104 100 ntBASIC1.66□□□□□ -2.14
PRPF40AO75400 AC019288.1-201ENST00000557918 224 ntBASIC1.66□□□□□ -2.14
PRPF40AO75400 AL645939.4-201ENST00000604495 135 ntBASIC1.66□□□□□ -2.14
PRPF40AO75400 AC012531.4-201ENST00000616509 177 ntBASIC1.66□□□□□ -2.14
PRPF40AO75400 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
PRPF40AO75400 Y_RNA.96-201ENST00000363092 109 ntBASIC1.65□□□□□ -2.15
PRPF40AO75400 RNU6-60P-201ENST00000364792 103 ntBASIC1.65□□□□□ -2.15
PRPF40AO75400 SNORD26-201ENST00000384147 75 ntBASIC1.65□□□□□ -2.15
PRPF40AO75400 MIR125B2-201ENST00000385128 89 ntBASIC1.65□□□□□ -2.15
PRPF40AO75400 MIR100-201ENST00000385259 80 ntBASIC1.65□□□□□ -2.15
PRPF40AO75400 Y_RNA.588-201ENST00000391254 102 ntBASIC1.65□□□□□ -2.15
PRPF40AO75400 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.65□□□□□ -2.15
PRPF40AO75400 AC004941.2-201ENST00000427009 228 ntBASIC1.65□□□□□ -2.15
PRPF40AO75400 AL354695.1-201ENST00000427935 228 ntBASIC1.65□□□□□ -2.15
PRPF40AO75400 SNORA25.16-201ENST00000516741 121 ntBASIC1.65□□□□□ -2.15
PRPF40AO75400 MIR4439-201ENST00000583746 80 ntBASIC1.65□□□□□ -2.15
PRPF40AO75400 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.65□□□□□ -2.15
PRPF40AO75400 MIR1-1-201ENST00000362147 71 ntBASIC1.64□□□□□ -2.15
PRPF40AO75400 MTATP8P2-201ENST00000435212 202 ntBASIC1.64□□□□□ -2.15
PRPF40AO75400 RPS29P23-201ENST00000458635 123 ntBASIC1.64□□□□□ -2.15
PRPF40AO75400 Y_RNA.694-201ENST00000516677 117 ntBASIC1.64□□□□□ -2.15
PRPF40AO75400 SNORA31.24-201ENST00000517232 57 ntBASIC1.64□□□□□ -2.15
PRPF40AO75400 MIR4676-201ENST00000583078 72 ntBASIC1.64□□□□□ -2.15
PRPF40AO75400 AC091304.10-201ENST00000641554 121 ntBASIC1.64□□□□□ -2.15
PRPF40AO75400 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
PRPF40AO75400 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
PRPF40AO75400 HSBP1P2-201ENST00000299671 229 ntBASIC1.63□□□□□ -2.15
PRPF40AO75400 RNU6-364P-201ENST00000384387 107 ntBASIC1.63□□□□□ -2.15
PRPF40AO75400 RNU6-905P-201ENST00000384434 107 ntBASIC1.63□□□□□ -2.15
PRPF40AO75400 AC109327.2-201ENST00000448339 378 ntBASIC1.63□□□□□ -2.15
PRPF40AO75400 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.63□□□□□ -2.15
PRPF40AO75400 RNU6-977P-201ENST00000516411 103 ntBASIC1.63□□□□□ -2.15
PRPF40AO75400 RNU6-531P-201ENST00000516694 104 ntBASIC1.63□□□□□ -2.15
PRPF40AO75400 AC020891.4-201ENST00000605745 93 ntBASIC1.63□□□□□ -2.15
PRPF40AO75400 AL512598.1-201ENST00000610158 273 ntBASIC1.63□□□□□ -2.15
PRPF40AO75400 AC027335.2-201ENST00000624030 375 ntBASIC1.63□□□□□ -2.15
PRPF40AO75400 SNORA25.8-201ENST00000364831 128 ntBASIC1.62□□□□□ -2.15
PRPF40AO75400 MIR938-201ENST00000401216 83 ntBASIC1.62□□□□□ -2.15
PRPF40AO75400 AP1B1P2-201ENST00000416196 106 ntBASIC1.62□□□□□ -2.15
PRPF40AO75400 RNU7-156P-201ENST00000517214 74 ntBASIC1.62□□□□□ -2.15
PRPF40AO75400 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
PRPF40AO75400 RNU6-640P-201ENST00000363693 105 ntBASIC1.61□□□□□ -2.15
PRPF40AO75400 Y_RNA.466-201ENST00000384294 113 ntBASIC1.61□□□□□ -2.15
PRPF40AO75400 Y_RNA.567-201ENST00000384736 106 ntBASIC1.61□□□□□ -2.15
PRPF40AO75400 RNA5SP170-201ENST00000517150 101 ntBASIC1.61□□□□□ -2.15
PRPF40AO75400 MIR6082-201ENST00000613604 109 ntBASIC1.61□□□□□ -2.15
PRPF40AO75400 MIR101-2-201ENST00000362195 79 ntBASIC1.6□□□□□ -2.15
PRPF40AO75400 MIR26B-201ENST00000362251 77 ntBASIC1.6□□□□□ -2.15
PRPF40AO75400 Y_RNA.13-201ENST00000362403 112 ntBASIC1.6□□□□□ -2.15
PRPF40AO75400 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
PRPF40AO75400 RNY4P30-201ENST00000410216 95 ntBASIC1.6□□□□□ -2.15
PRPF40AO75400 RNU7-95P-201ENST00000459222 64 ntBASIC1.6□□□□□ -2.15
PRPF40AO75400 RNU7-61P-201ENST00000515897 61 ntBASIC1.6□□□□□ -2.15
PRPF40AO75400 MIR4498-201ENST00000577599 66 ntBASIC1.6□□□□□ -2.15
PRPF40AO75400 MIR4777-201ENST00000583710 86 ntBASIC1.6□□□□□ -2.15
PRPF40AO75400 MIR548Z-201ENST00000584743 97 ntBASIC1.6□□□□□ -2.15
PRPF40AO75400 snoU13.31-201ENST00000607291 104 ntBASIC1.6□□□□□ -2.15
PRPF40AO75400 RNU6-1163P-201ENST00000364516 107 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 260.8 ms