Protein–RNA interactions for Protein: O43617

TRAPPC3, Trafficking protein particle complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3O43617 MIR548AG2-201ENST00000581228 64 ntBASIC-0.53□□□□□ -2.49
TRAPPC3O43617 SNORD114-28-201ENST00000363610 72 ntBASIC-0.54□□□□□ -2.5
TRAPPC3O43617 SNORD114-11-201ENST00000363738 75 ntBASIC-0.54□□□□□ -2.5
TRAPPC3O43617 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.54□□□□□ -2.5
TRAPPC3O43617 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.54□□□□□ -2.5
TRAPPC3O43617 Y_RNA.455-201ENST00000384230 98 ntBASIC-0.54□□□□□ -2.5
TRAPPC3O43617 MIR4643-201ENST00000577473 78 ntBASIC-0.54□□□□□ -2.5
TRAPPC3O43617 RNU6-103P-201ENST00000363686 107 ntBASIC-0.55□□□□□ -2.5
TRAPPC3O43617 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.55□□□□□ -2.5
TRAPPC3O43617 Y_RNA.527-201ENST00000384573 102 ntBASIC-0.55□□□□□ -2.5
TRAPPC3O43617 MIR181B2-201ENST00000385004 89 ntBASIC-0.55□□□□□ -2.5
TRAPPC3O43617 AL121914.1-201ENST00000450188 156 ntBASIC-0.55□□□□□ -2.5
TRAPPC3O43617 RNU7-195P-201ENST00000458793 62 ntBASIC-0.55□□□□□ -2.5
TRAPPC3O43617 RNU6-175P-201ENST00000516896 107 ntBASIC-0.55□□□□□ -2.5
TRAPPC3O43617 RNU7-188P-201ENST00000517063 64 ntBASIC-0.55□□□□□ -2.5
TRAPPC3O43617 RNU6-1137P-201ENST00000517073 99 ntBASIC-0.55□□□□□ -2.5
TRAPPC3O43617 MTND5P40-201ENST00000559945 246 ntBASIC-0.55□□□□□ -2.5
TRAPPC3O43617 MIR4744-201ENST00000581563 82 ntBASIC-0.55□□□□□ -2.5
TRAPPC3O43617 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.56□□□□□ -2.5
TRAPPC3O43617 MIR206-201ENST00000384872 86 ntBASIC-0.56□□□□□ -2.5
TRAPPC3O43617 AL603914.1-201ENST00000401964 204 ntBASIC-0.56□□□□□ -2.5
TRAPPC3O43617 MIR548I2-201ENST00000408348 149 ntBASIC-0.56□□□□□ -2.5
TRAPPC3O43617 MTND5P20-201ENST00000448677 143 ntBASIC-0.56□□□□□ -2.5
TRAPPC3O43617 RNU7-106P-201ENST00000459514 67 ntBASIC-0.56□□□□□ -2.5
TRAPPC3O43617 MIR4263-201ENST00000584745 83 ntBASIC-0.56□□□□□ -2.5
TRAPPC3O43617 U2.14-201ENST00000615943 113 ntBASIC-0.56□□□□□ -2.5
TRAPPC3O43617 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.57□□□□□ -2.5
TRAPPC3O43617 RNU4-17P-201ENST00000365598 141 ntBASIC-0.57□□□□□ -2.5
TRAPPC3O43617 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.57□□□□□ -2.5
TRAPPC3O43617 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.57□□□□□ -2.5
TRAPPC3O43617 MIR519E-201ENST00000385075 84 ntBASIC-0.57□□□□□ -2.5
TRAPPC3O43617 RNU6-578P-201ENST00000390980 103 ntBASIC-0.57□□□□□ -2.5
TRAPPC3O43617 SNORD63B-201ENST00000411005 70 ntBASIC-0.57□□□□□ -2.5
TRAPPC3O43617 RNU7-48P-201ENST00000458875 63 ntBASIC-0.57□□□□□ -2.5
TRAPPC3O43617 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.57□□□□□ -2.5
TRAPPC3O43617 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.57□□□□□ -2.5
TRAPPC3O43617 MIR4493-201ENST00000584016 73 ntBASIC-0.57□□□□□ -2.5
TRAPPC3O43617 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.57□□□□□ -2.5
TRAPPC3O43617 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.58□□□□□ -2.5
TRAPPC3O43617 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.58□□□□□ -2.5
TRAPPC3O43617 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.58□□□□□ -2.5
TRAPPC3O43617 MIR1265-201ENST00000408444 86 ntBASIC-0.58□□□□□ -2.5
TRAPPC3O43617 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.58□□□□□ -2.5
TRAPPC3O43617 RNU6-284P-201ENST00000411105 106 ntBASIC-0.58□□□□□ -2.5
TRAPPC3O43617 RNU7-13P-201ENST00000516413 62 ntBASIC-0.58□□□□□ -2.5
TRAPPC3O43617 MIR4680-201ENST00000580906 66 ntBASIC-0.58□□□□□ -2.5
TRAPPC3O43617 MIR548AE1-201ENST00000583292 70 ntBASIC-0.58□□□□□ -2.5
TRAPPC3O43617 MIR335-201ENST00000362173 94 ntBASIC-0.59□□□□□ -2.5
TRAPPC3O43617 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.59□□□□□ -2.5
TRAPPC3O43617 RNU6-524P-201ENST00000384270 107 ntBASIC-0.59□□□□□ -2.5
TRAPPC3O43617 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.59□□□□□ -2.5
TRAPPC3O43617 RNU4-69P-201ENST00000410677 143 ntBASIC-0.59□□□□□ -2.5
TRAPPC3O43617 AC113618.1-201ENST00000416747 285 ntBASIC-0.59□□□□□ -2.5
TRAPPC3O43617 RNY3P16-201ENST00000516338 101 ntBASIC-0.59□□□□□ -2.5
TRAPPC3O43617 Y_RNA.702-201ENST00000516843 96 ntBASIC-0.59□□□□□ -2.5
TRAPPC3O43617 RNU6-988P-201ENST00000519081 107 ntBASIC-0.59□□□□□ -2.5
TRAPPC3O43617 MIR4473-201ENST00000583731 91 ntBASIC-0.59□□□□□ -2.5
TRAPPC3O43617 MIR8064-201ENST00000612863 90 ntBASIC-0.59□□□□□ -2.5
TRAPPC3O43617 AC069503.3-201ENST00000618674 145 ntBASIC-0.59□□□□□ -2.5
TRAPPC3O43617 FTX_2.1-201ENST00000618816 94 ntBASIC-0.59□□□□□ -2.5
TRAPPC3O43617 uc_338.10-201ENST00000621872 182 ntBASIC-0.59□□□□□ -2.5
TRAPPC3O43617 uc_338.36-201ENST00000622331 158 ntBASIC-0.59□□□□□ -2.5
TRAPPC3O43617 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.6□□□□□ -2.51
TRAPPC3O43617 MIR539-201ENST00000365690 78 ntBASIC-0.6□□□□□ -2.51
TRAPPC3O43617 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.6□□□□□ -2.51
TRAPPC3O43617 RNY3P14-201ENST00000384309 102 ntBASIC-0.6□□□□□ -2.51
TRAPPC3O43617 Y_RNA.509-201ENST00000384506 99 ntBASIC-0.6□□□□□ -2.51
TRAPPC3O43617 RNU7-74P-201ENST00000459104 62 ntBASIC-0.6□□□□□ -2.51
TRAPPC3O43617 AC114755.3-201ENST00000481111 251 ntBASIC-0.6□□□□□ -2.51
TRAPPC3O43617 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.6□□□□□ -2.51
TRAPPC3O43617 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.61□□□□□ -2.51
TRAPPC3O43617 Y_RNA.216-201ENST00000364205 93 ntBASIC-0.61□□□□□ -2.51
TRAPPC3O43617 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.61□□□□□ -2.51
TRAPPC3O43617 RNU6-690P-201ENST00000365242 106 ntBASIC-0.61□□□□□ -2.51
TRAPPC3O43617 RNU6-643P-201ENST00000384018 107 ntBASIC-0.61□□□□□ -2.51
TRAPPC3O43617 RNU6-480P-201ENST00000384332 107 ntBASIC-0.61□□□□□ -2.51
TRAPPC3O43617 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.61□□□□□ -2.51
TRAPPC3O43617 MIR617-201ENST00000385030 97 ntBASIC-0.61□□□□□ -2.51
TRAPPC3O43617 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.61□□□□□ -2.51
TRAPPC3O43617 Z95118.1-201ENST00000421372 247 ntBASIC-0.61□□□□□ -2.51
TRAPPC3O43617 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.61□□□□□ -2.51
TRAPPC3O43617 YWHAEP2-201ENST00000580066 112 ntBASIC-0.61□□□□□ -2.51
TRAPPC3O43617 MIR4432-201ENST00000581823 84 ntBASIC-0.61□□□□□ -2.51
TRAPPC3O43617 AC009779.6-201ENST00000603972 165 ntBASIC-0.61□□□□□ -2.51
TRAPPC3O43617 RNU2-4P-201ENST00000606190 192 ntBASIC-0.61□□□□□ -2.51
TRAPPC3O43617 AL391099.1-201ENST00000624635 187 ntBASIC-0.61□□□□□ -2.51
TRAPPC3O43617 MIR101-1-201ENST00000362265 75 ntBASIC-0.62□□□□□ -2.51
TRAPPC3O43617 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.62□□□□□ -2.51
TRAPPC3O43617 RNU6-170P-201ENST00000362832 104 ntBASIC-0.62□□□□□ -2.51
TRAPPC3O43617 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.62□□□□□ -2.51
TRAPPC3O43617 SNORA25.7-201ENST00000364375 127 ntBASIC-0.62□□□□□ -2.51
TRAPPC3O43617 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.62□□□□□ -2.51
TRAPPC3O43617 Y_RNA.431-201ENST00000384086 102 ntBASIC-0.62□□□□□ -2.51
TRAPPC3O43617 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.62□□□□□ -2.51
TRAPPC3O43617 SNORA32.3-201ENST00000384772 121 ntBASIC-0.62□□□□□ -2.51
TRAPPC3O43617 RNU6-240P-201ENST00000516098 97 ntBASIC-0.62□□□□□ -2.51
TRAPPC3O43617 MIR376B-201ENST00000614515 100 ntBASIC-0.62□□□□□ -2.51
TRAPPC3O43617 AP001362.1-201ENST00000625165 124 ntBASIC-0.62□□□□□ -2.51
TRAPPC3O43617 Y_RNA.138-201ENST00000363462 102 ntBASIC-0.63□□□□□ -2.51
TRAPPC3O43617 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.63□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms