Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 MIR3670-3-201ENST00000584855 65 ntBASIC2.56□□□□□ -2
H3BM21 PRELID3BP2-201ENST00000605362 201 ntBASIC2.56□□□□□ -2
H3BM21 MIR3670-4-201ENST00000612260 65 ntBASIC2.56□□□□□ -2
H3BM21 AC022202.1-201ENST00000613515 211 ntBASIC2.56□□□□□ -2
H3BM21 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
H3BM21 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.55□□□□□ -2
H3BM21 RNU6-668P-201ENST00000364180 107 ntBASIC2.55□□□□□ -2
H3BM21 SNORA16B-201ENST00000364674 135 ntBASIC2.55□□□□□ -2
H3BM21 RNU1-91P-201ENST00000364746 163 ntBASIC2.55□□□□□ -2
H3BM21 RNU6-1335P-201ENST00000365426 107 ntBASIC2.55□□□□□ -2
H3BM21 SNORA70B-201ENST00000384210 135 ntBASIC2.55□□□□□ -2
H3BM21 Y_RNA.536-201ENST00000384621 113 ntBASIC2.55□□□□□ -2
H3BM21 U8.13-201ENST00000390842 128 ntBASIC2.55□□□□□ -2
H3BM21 SNORD100-201ENST00000408573 76 ntBASIC2.55□□□□□ -2
H3BM21 RNU6-1165P-201ENST00000410119 107 ntBASIC2.55□□□□□ -2
H3BM21 MTND4LP1-201ENST00000446263 157 ntBASIC2.55□□□□□ -2
H3BM21 Y_RNA.809-201ENST00000516058 95 ntBASIC2.55□□□□□ -2
H3BM21 MIR4658-201ENST00000584344 65 ntBASIC2.55□□□□□ -2
H3BM21 MIR7843-201ENST00000622274 79 ntBASIC2.55□□□□□ -2
H3BM21 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
H3BM21 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
H3BM21 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
H3BM21 Y_RNA.375-201ENST00000365625 101 ntBASIC2.54□□□□□ -2
H3BM21 MIR519A1-201ENST00000385257 85 ntBASIC2.54□□□□□ -2
H3BM21 RNA5SP210-201ENST00000391034 120 ntBASIC2.54□□□□□ -2
H3BM21 AC244098.3-201ENST00000424803 96 ntBASIC2.54□□□□□ -2
H3BM21 AC008413.1-201ENST00000511864 177 ntBASIC2.54□□□□□ -2
H3BM21 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.54□□□□□ -2
H3BM21 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
H3BM21 AC131280.1-202ENST00000624067 4211 ntBASIC2.54□□□□□ -2
H3BM21 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.53□□□□□ -2
H3BM21 RNU6-1260P-201ENST00000362944 107 ntBASIC2.53□□□□□ -2
H3BM21 MIR451A-201ENST00000385059 72 ntBASIC2.53□□□□□ -2
H3BM21 MIR27B-201ENST00000385129 97 ntBASIC2.53□□□□□ -2
H3BM21 RNU6-935P-201ENST00000410371 100 ntBASIC2.53□□□□□ -2
H3BM21 RNU4-88P-201ENST00000411220 86 ntBASIC2.53□□□□□ -2
H3BM21 RNVU1-2-201ENST00000516326 135 ntBASIC2.53□□□□□ -2
H3BM21 MIR4491-201ENST00000581087 68 ntBASIC2.53□□□□□ -2
H3BM21 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
H3BM21 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
H3BM21 RNA5SP48-201ENST00000363969 126 ntBASIC2.52□□□□□ -2.01
H3BM21 SNORA67.1-201ENST00000364749 141 ntBASIC2.52□□□□□ -2.01
H3BM21 RNU6-1177P-201ENST00000391058 104 ntBASIC2.52□□□□□ -2.01
H3BM21 RNU11-3P-201ENST00000391111 133 ntBASIC2.52□□□□□ -2.01
H3BM21 MIR3126-201ENST00000577443 74 ntBASIC2.52□□□□□ -2.01
H3BM21 MTRNR2L2-201ENST00000604882 87 ntBASIC2.52□□□□□ -2.01
H3BM21 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.52□□□□□ -2.01
H3BM21 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.52□□□□□ -2.01
H3BM21 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
H3BM21 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.51□□□□□ -2.01
H3BM21 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.51□□□□□ -2.01
H3BM21 RNU6-382P-201ENST00000365181 106 ntBASIC2.51□□□□□ -2.01
H3BM21 MT-TF-201ENST00000387314 71 ntBASIC2.51□□□□□ -2.01
H3BM21 SCARNA21.1-201ENST00000515996 128 ntBASIC2.51□□□□□ -2.01
H3BM21 RNA5SP24-201ENST00000516478 95 ntBASIC2.51□□□□□ -2.01
H3BM21 RNA5SP481-201ENST00000516814 122 ntBASIC2.51□□□□□ -2.01
H3BM21 MIR4524B-201ENST00000581569 115 ntBASIC2.51□□□□□ -2.01
H3BM21 MIR4264-201ENST00000583520 66 ntBASIC2.51□□□□□ -2.01
H3BM21 MIR4769-201ENST00000584126 77 ntBASIC2.51□□□□□ -2.01
H3BM21 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.51□□□□□ -2.01
H3BM21 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
H3BM21 MIR101-2-201ENST00000362195 79 ntBASIC2.5□□□□□ -2.01
H3BM21 Y_RNA.258-201ENST00000364613 105 ntBASIC2.5□□□□□ -2.01
H3BM21 MIR504-201ENST00000385065 83 ntBASIC2.5□□□□□ -2.01
H3BM21 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
H3BM21 Y_RNA.588-201ENST00000391254 102 ntBASIC2.5□□□□□ -2.01
H3BM21 RNA5SP320-201ENST00000516263 124 ntBASIC2.5□□□□□ -2.01
H3BM21 SNORD53-201ENST00000579969 78 ntBASIC2.5□□□□□ -2.01
H3BM21 MIR548H5-201ENST00000580314 60 ntBASIC2.5□□□□□ -2.01
H3BM21 MIR3920-201ENST00000581751 86 ntBASIC2.5□□□□□ -2.01
H3BM21 MIR5092-201ENST00000583139 88 ntBASIC2.5□□□□□ -2.01
H3BM21 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.5□□□□□ -2.01
H3BM21 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.5□□□□□ -2.01
H3BM21 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
H3BM21 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
H3BM21 RNU6-112P-201ENST00000363599 104 ntBASIC2.49□□□□□ -2.01
H3BM21 RNU1-148P-201ENST00000384472 162 ntBASIC2.49□□□□□ -2.01
H3BM21 RNU7-62P-201ENST00000458856 62 ntBASIC2.49□□□□□ -2.01
H3BM21 snoU13.26-201ENST00000459452 105 ntBASIC2.49□□□□□ -2.01
H3BM21 RNU7-10P-201ENST00000607194 63 ntBASIC2.49□□□□□ -2.01
H3BM21 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
H3BM21 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.48□□□□□ -2.01
H3BM21 AP000942.3-201ENST00000603702 160 ntBASIC2.48□□□□□ -2.01
H3BM21 uc_338.6-201ENST00000613544 171 ntBASIC2.48□□□□□ -2.01
H3BM21 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
H3BM21 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
H3BM21 AP006437.1-201ENST00000641440 3685 ntBASIC2.47□□□□□ -2.01
H3BM21 SNORA25.3-201ENST00000363205 127 ntBASIC2.47□□□□□ -2.01
H3BM21 RNU6-396P-201ENST00000365369 105 ntBASIC2.47□□□□□ -2.01
H3BM21 MIR144-201ENST00000384886 86 ntBASIC2.47□□□□□ -2.01
H3BM21 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
H3BM21 RNU6-1054P-201ENST00000411293 104 ntBASIC2.47□□□□□ -2.01
H3BM21 RNU6-322P-201ENST00000516010 103 ntBASIC2.47□□□□□ -2.01
H3BM21 SNORD111.1-201ENST00000516421 86 ntBASIC2.47□□□□□ -2.01
H3BM21 MIR3938-201ENST00000582157 103 ntBASIC2.47□□□□□ -2.01
H3BM21 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.47□□□□□ -2.01
H3BM21 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
H3BM21 RNU6-403P-201ENST00000363163 104 ntBASIC2.46□□□□□ -2.02
H3BM21 SNORA48.1-201ENST00000390879 135 ntBASIC2.46□□□□□ -2.02
H3BM21 MIR1283-2-201ENST00000408621 87 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 205 ms