Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 AC090617.10-201ENST00000624308 134 ntBASIC-1.85□□□□□ -2.71
TRAV1-2A0A0B4J238 RNU6-845P-201ENST00000362578 103 ntBASIC-1.86□□□□□ -2.71
TRAV1-2A0A0B4J238 RNY4P6-201ENST00000363667 96 ntBASIC-1.86□□□□□ -2.71
TRAV1-2A0A0B4J238 RNY3P11-201ENST00000364153 102 ntBASIC-1.86□□□□□ -2.71
TRAV1-2A0A0B4J238 RNU6-54P-201ENST00000365563 107 ntBASIC-1.86□□□□□ -2.71
TRAV1-2A0A0B4J238 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.86□□□□□ -2.71
TRAV1-2A0A0B4J238 RNU6-746P-201ENST00000384112 109 ntBASIC-1.86□□□□□ -2.71
TRAV1-2A0A0B4J238 RNU6-21P-201ENST00000384710 107 ntBASIC-1.86□□□□□ -2.71
TRAV1-2A0A0B4J238 Y_RNA.599-201ENST00000410489 109 ntBASIC-1.86□□□□□ -2.71
TRAV1-2A0A0B4J238 RNU6-1148P-201ENST00000410992 104 ntBASIC-1.86□□□□□ -2.71
TRAV1-2A0A0B4J238 RNU4-61P-201ENST00000411243 107 ntBASIC-1.86□□□□□ -2.71
TRAV1-2A0A0B4J238 AC022028.1-201ENST00000412054 408 ntBASIC-1.86□□□□□ -2.71
TRAV1-2A0A0B4J238 RNU6-1281P-201ENST00000516223 105 ntBASIC-1.86□□□□□ -2.71
TRAV1-2A0A0B4J238 RNU7-4P-201ENST00000516961 62 ntBASIC-1.86□□□□□ -2.71
TRAV1-2A0A0B4J238 C8orf59P2-201ENST00000603441 271 ntBASIC-1.86□□□□□ -2.71
TRAV1-2A0A0B4J238 MIR6863-201ENST00000636112 90 ntBASIC-1.86□□□□□ -2.71
TRAV1-2A0A0B4J238 RNY3P3-201ENST00000363816 102 ntBASIC-1.87□□□□□ -2.71
TRAV1-2A0A0B4J238 SNORD114-3-201ENST00000364969 75 ntBASIC-1.87□□□□□ -2.71
TRAV1-2A0A0B4J238 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.87□□□□□ -2.71
TRAV1-2A0A0B4J238 PMCHL1-202ENST00000423102 261 ntBASIC-1.87□□□□□ -2.71
TRAV1-2A0A0B4J238 Y_RNA.653-201ENST00000459091 95 ntBASIC-1.87□□□□□ -2.71
TRAV1-2A0A0B4J238 SNORD63.1-201ENST00000516178 80 ntBASIC-1.87□□□□□ -2.71
TRAV1-2A0A0B4J238 RNU6-1314P-201ENST00000517139 104 ntBASIC-1.87□□□□□ -2.71
TRAV1-2A0A0B4J238 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.87□□□□□ -2.71
TRAV1-2A0A0B4J238 MIR4308-201ENST00000580634 81 ntBASIC-1.87□□□□□ -2.71
TRAV1-2A0A0B4J238 MIR376B-201ENST00000614515 100 ntBASIC-1.87□□□□□ -2.71
TRAV1-2A0A0B4J238 AC138305.3-201ENST00000624988 240 ntBASIC-1.87□□□□□ -2.71
TRAV1-2A0A0B4J238 SNORD115-33-201ENST00000363723 82 ntBASIC-1.88□□□□□ -2.71
TRAV1-2A0A0B4J238 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.88□□□□□ -2.71
TRAV1-2A0A0B4J238 RNU4-10P-201ENST00000364383 140 ntBASIC-1.88□□□□□ -2.71
TRAV1-2A0A0B4J238 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.88□□□□□ -2.71
TRAV1-2A0A0B4J238 RNU6-483P-201ENST00000384088 108 ntBASIC-1.88□□□□□ -2.71
TRAV1-2A0A0B4J238 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.88□□□□□ -2.71
TRAV1-2A0A0B4J238 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.88□□□□□ -2.71
TRAV1-2A0A0B4J238 MRPS35P2-201ENST00000508242 191 ntBASIC-1.88□□□□□ -2.71
TRAV1-2A0A0B4J238 RNU6-120P-201ENST00000516077 103 ntBASIC-1.88□□□□□ -2.71
TRAV1-2A0A0B4J238 RNU6-358P-201ENST00000516564 75 ntBASIC-1.88□□□□□ -2.71
TRAV1-2A0A0B4J238 RNU6-1149P-201ENST00000516810 97 ntBASIC-1.88□□□□□ -2.71
TRAV1-2A0A0B4J238 RNU2-4P-201ENST00000606190 192 ntBASIC-1.88□□□□□ -2.71
TRAV1-2A0A0B4J238 SNORD36A-201ENST00000362874 73 ntBASIC-1.89□□□□□ -2.71
TRAV1-2A0A0B4J238 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.89□□□□□ -2.71
TRAV1-2A0A0B4J238 Y_RNA.813-201ENST00000364639 102 ntBASIC-1.89□□□□□ -2.71
TRAV1-2A0A0B4J238 Y_RNA.286-201ENST00000364813 102 ntBASIC-1.89□□□□□ -2.71
TRAV1-2A0A0B4J238 Y_RNA.605-201ENST00000410577 105 ntBASIC-1.89□□□□□ -2.71
TRAV1-2A0A0B4J238 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.89□□□□□ -2.71
TRAV1-2A0A0B4J238 SNORD42B-201ENST00000458893 67 ntBASIC-1.89□□□□□ -2.71
TRAV1-2A0A0B4J238 Y_RNA.682-201ENST00000516457 100 ntBASIC-1.89□□□□□ -2.71
TRAV1-2A0A0B4J238 Y_RNA.704-201ENST00000516851 102 ntBASIC-1.89□□□□□ -2.71
TRAV1-2A0A0B4J238 Y_RNA.711-201ENST00000516993 102 ntBASIC-1.89□□□□□ -2.71
TRAV1-2A0A0B4J238 AC009779.6-201ENST00000603972 165 ntBASIC-1.89□□□□□ -2.71
TRAV1-2A0A0B4J238 Y_RNA.772-201ENST00000606692 102 ntBASIC-1.89□□□□□ -2.71
TRAV1-2A0A0B4J238 AL359880.1-201ENST00000621879 266 ntBASIC-1.89□□□□□ -2.71
TRAV1-2A0A0B4J238 MIR6888-201ENST00000621977 67 ntBASIC-1.89□□□□□ -2.71
TRAV1-2A0A0B4J238 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.9□□□□□ -2.71
TRAV1-2A0A0B4J238 RNY4P27-201ENST00000363341 96 ntBASIC-1.9□□□□□ -2.71
TRAV1-2A0A0B4J238 SNORD18.1-201ENST00000363807 70 ntBASIC-1.9□□□□□ -2.71
TRAV1-2A0A0B4J238 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.9□□□□□ -2.71
TRAV1-2A0A0B4J238 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.9□□□□□ -2.71
TRAV1-2A0A0B4J238 RNU6-937P-201ENST00000384325 106 ntBASIC-1.9□□□□□ -2.71
TRAV1-2A0A0B4J238 RNA5SP86-201ENST00000390869 98 ntBASIC-1.9□□□□□ -2.71
TRAV1-2A0A0B4J238 SNORA26.4-201ENST00000391188 123 ntBASIC-1.9□□□□□ -2.71
TRAV1-2A0A0B4J238 AL445567.1-201ENST00000439121 144 ntBASIC-1.9□□□□□ -2.71
TRAV1-2A0A0B4J238 AC082651.2-201ENST00000496833 166 ntBASIC-1.9□□□□□ -2.71
TRAV1-2A0A0B4J238 RNU6-507P-201ENST00000516045 100 ntBASIC-1.9□□□□□ -2.71
TRAV1-2A0A0B4J238 RNU7-2P-201ENST00000516096 62 ntBASIC-1.9□□□□□ -2.71
TRAV1-2A0A0B4J238 RNU6-412P-201ENST00000516434 106 ntBASIC-1.9□□□□□ -2.71
TRAV1-2A0A0B4J238 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.91□□□□□ -2.72
TRAV1-2A0A0B4J238 RNU2-51P-201ENST00000410708 197 ntBASIC-1.91□□□□□ -2.72
TRAV1-2A0A0B4J238 MTND1P1-201ENST00000445453 368 ntBASIC-1.91□□□□□ -2.72
TRAV1-2A0A0B4J238 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-1.91□□□□□ -2.72
TRAV1-2A0A0B4J238 SEPT14P8-201ENST00000508026 178 ntBASIC-1.91□□□□□ -2.72
TRAV1-2A0A0B4J238 RNU2-35P-201ENST00000516446 142 ntBASIC-1.91□□□□□ -2.72
TRAV1-2A0A0B4J238 Y_RNA.691-201ENST00000516611 103 ntBASIC-1.91□□□□□ -2.72
TRAV1-2A0A0B4J238 AC091912.2-201ENST00000624798 167 ntBASIC-1.91□□□□□ -2.72
TRAV1-2A0A0B4J238 RNA5SP26-201ENST00000362406 119 ntBASIC-1.92□□□□□ -2.72
TRAV1-2A0A0B4J238 RNU6-1272P-201ENST00000362776 107 ntBASIC-1.92□□□□□ -2.72
TRAV1-2A0A0B4J238 SNORD27-201ENST00000363981 72 ntBASIC-1.92□□□□□ -2.72
TRAV1-2A0A0B4J238 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.92□□□□□ -2.72
TRAV1-2A0A0B4J238 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.92□□□□□ -2.72
TRAV1-2A0A0B4J238 RNU4-69P-201ENST00000410677 143 ntBASIC-1.92□□□□□ -2.72
TRAV1-2A0A0B4J238 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-1.92□□□□□ -2.72
TRAV1-2A0A0B4J238 RNU6-732P-201ENST00000516033 103 ntBASIC-1.92□□□□□ -2.72
TRAV1-2A0A0B4J238 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.92□□□□□ -2.72
TRAV1-2A0A0B4J238 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.92□□□□□ -2.72
TRAV1-2A0A0B4J238 MIR4696-201ENST00000581431 70 ntBASIC-1.92□□□□□ -2.72
TRAV1-2A0A0B4J238 AC124864.2-201ENST00000624736 186 ntBASIC-1.92□□□□□ -2.72
TRAV1-2A0A0B4J238 AC024614.3-201ENST00000637860 256 ntBASIC-1.92□□□□□ -2.72
TRAV1-2A0A0B4J238 SNORA63.6-201ENST00000364921 119 ntBASIC-1.93□□□□□ -2.72
TRAV1-2A0A0B4J238 RNU6-728P-201ENST00000365375 104 ntBASIC-1.93□□□□□ -2.72
TRAV1-2A0A0B4J238 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.93□□□□□ -2.72
TRAV1-2A0A0B4J238 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.93□□□□□ -2.72
TRAV1-2A0A0B4J238 Y_RNA.482-201ENST00000384377 111 ntBASIC-1.93□□□□□ -2.72
TRAV1-2A0A0B4J238 MIR628-201ENST00000385229 95 ntBASIC-1.93□□□□□ -2.72
TRAV1-2A0A0B4J238 MT-TT-201ENST00000387460 66 ntBASIC-1.93□□□□□ -2.72
TRAV1-2A0A0B4J238 RNU6-780P-201ENST00000391030 104 ntBASIC-1.93□□□□□ -2.72
TRAV1-2A0A0B4J238 RNU6-243P-201ENST00000391140 107 ntBASIC-1.93□□□□□ -2.72
TRAV1-2A0A0B4J238 RNU6-466P-201ENST00000391224 103 ntBASIC-1.93□□□□□ -2.72
TRAV1-2A0A0B4J238 AL606845.1-201ENST00000404881 255 ntBASIC-1.93□□□□□ -2.72
TRAV1-2A0A0B4J238 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.93□□□□□ -2.72
TRAV1-2A0A0B4J238 AC006006.1-201ENST00000603082 144 ntBASIC-1.93□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms