Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
HS3ST3A1Q9Y663 RNU1-17P-201ENST00000363022 152 ntBASIC1.83□□□□□ -2.12
HS3ST3A1Q9Y663 Y_RNA.98-201ENST00000363109 102 ntBASIC1.83□□□□□ -2.12
HS3ST3A1Q9Y663 RNU6-112P-201ENST00000363599 104 ntBASIC1.83□□□□□ -2.12
HS3ST3A1Q9Y663 RNU6-865P-201ENST00000364772 107 ntBASIC1.83□□□□□ -2.12
HS3ST3A1Q9Y663 RNU6-950P-201ENST00000384651 107 ntBASIC1.83□□□□□ -2.12
HS3ST3A1Q9Y663 RNU6-129P-201ENST00000391022 107 ntBASIC1.83□□□□□ -2.12
HS3ST3A1Q9Y663 RNU4-83P-201ENST00000410863 133 ntBASIC1.83□□□□□ -2.12
HS3ST3A1Q9Y663 RNU7-85P-201ENST00000458851 63 ntBASIC1.83□□□□□ -2.12
HS3ST3A1Q9Y663 AC114801.3-201ENST00000510231 177 ntBASIC1.83□□□□□ -2.12
HS3ST3A1Q9Y663 MIR548AO-201ENST00000579992 96 ntBASIC1.83□□□□□ -2.12
HS3ST3A1Q9Y663 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
HS3ST3A1Q9Y663 RNA5SP138-201ENST00000365098 114 ntBASIC1.82□□□□□ -2.12
HS3ST3A1Q9Y663 Y_RNA.545-201ENST00000384652 105 ntBASIC1.82□□□□□ -2.12
HS3ST3A1Q9Y663 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
HS3ST3A1Q9Y663 AL603825.1-201ENST00000438481 80 ntBASIC1.82□□□□□ -2.12
HS3ST3A1Q9Y663 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.82□□□□□ -2.12
HS3ST3A1Q9Y663 U1.36-201ENST00000620684 176 ntBASIC1.82□□□□□ -2.12
HS3ST3A1Q9Y663 RNU6-480P-201ENST00000384332 107 ntBASIC1.81□□□□□ -2.12
HS3ST3A1Q9Y663 MIR9-3-201ENST00000385084 90 ntBASIC1.81□□□□□ -2.12
HS3ST3A1Q9Y663 SNORA48.1-201ENST00000390879 135 ntBASIC1.81□□□□□ -2.12
HS3ST3A1Q9Y663 AC003989.2-201ENST00000440224 169 ntBASIC1.81□□□□□ -2.12
HS3ST3A1Q9Y663 SCARNA18B-201ENST00000458806 135 ntBASIC1.81□□□□□ -2.12
HS3ST3A1Q9Y663 AC005908.1-201ENST00000468701 347 ntBASIC1.81□□□□□ -2.12
HS3ST3A1Q9Y663 MIR4287-201ENST00000579398 78 ntBASIC1.81□□□□□ -2.12
HS3ST3A1Q9Y663 AP001362.1-201ENST00000625165 124 ntBASIC1.81□□□□□ -2.12
HS3ST3A1Q9Y663 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.81□□□□□ -2.12
HS3ST3A1Q9Y663 Y_RNA.354-201ENST00000365448 111 ntBASIC1.8□□□□□ -2.12
HS3ST3A1Q9Y663 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
HS3ST3A1Q9Y663 MIR1236-201ENST00000408340 102 ntBASIC1.8□□□□□ -2.12
HS3ST3A1Q9Y663 RNA5SP458-201ENST00000516188 119 ntBASIC1.8□□□□□ -2.12
HS3ST3A1Q9Y663 RNU6-557P-201ENST00000516842 110 ntBASIC1.8□□□□□ -2.12
HS3ST3A1Q9Y663 MIR4448-201ENST00000584360 86 ntBASIC1.8□□□□□ -2.12
HS3ST3A1Q9Y663 AC084768.2-201ENST00000622736 221 ntBASIC1.8□□□□□ -2.12
HS3ST3A1Q9Y663 MIR424-201ENST00000362227 98 ntBASIC1.79□□□□□ -2.12
HS3ST3A1Q9Y663 MIRLET7A1-201ENST00000362295 80 ntBASIC1.79□□□□□ -2.12
HS3ST3A1Q9Y663 RNA5SP276-201ENST00000362580 94 ntBASIC1.79□□□□□ -2.12
HS3ST3A1Q9Y663 Y_RNA.532-201ENST00000384590 113 ntBASIC1.79□□□□□ -2.12
HS3ST3A1Q9Y663 MIR520A-201ENST00000384862 85 ntBASIC1.79□□□□□ -2.12
HS3ST3A1Q9Y663 RNU6-519P-201ENST00000410590 108 ntBASIC1.79□□□□□ -2.12
HS3ST3A1Q9Y663 AC244023.1-201ENST00000426884 112 ntBASIC1.79□□□□□ -2.12
HS3ST3A1Q9Y663 RNU6-717P-201ENST00000459076 104 ntBASIC1.79□□□□□ -2.12
HS3ST3A1Q9Y663 RNA5SP445-201ENST00000515889 115 ntBASIC1.79□□□□□ -2.12
HS3ST3A1Q9Y663 SNORA25.15-201ENST00000516487 89 ntBASIC1.79□□□□□ -2.12
HS3ST3A1Q9Y663 RNU6-250P-201ENST00000516958 103 ntBASIC1.79□□□□□ -2.12
HS3ST3A1Q9Y663 MTND5P40-201ENST00000559945 246 ntBASIC1.79□□□□□ -2.12
HS3ST3A1Q9Y663 AC141846.1-201ENST00000568348 142 ntBASIC1.79□□□□□ -2.12
HS3ST3A1Q9Y663 MIR4255-201ENST00000579351 72 ntBASIC1.79□□□□□ -2.12
HS3ST3A1Q9Y663 MIR3134-201ENST00000579433 74 ntBASIC1.79□□□□□ -2.12
HS3ST3A1Q9Y663 MIR4764-201ENST00000580680 88 ntBASIC1.79□□□□□ -2.12
HS3ST3A1Q9Y663 AC242498.1-201ENST00000604134 111 ntBASIC1.79□□□□□ -2.12
HS3ST3A1Q9Y663 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.79□□□□□ -2.12
HS3ST3A1Q9Y663 AC008133.2-201ENST00000624540 351 ntBASIC1.79□□□□□ -2.12
HS3ST3A1Q9Y663 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HS3ST3A1Q9Y663 SNORA63.2-201ENST00000362603 126 ntBASIC1.78□□□□□ -2.12
HS3ST3A1Q9Y663 SNORD115-37-201ENST00000363768 82 ntBASIC1.78□□□□□ -2.12
HS3ST3A1Q9Y663 RNU6-590P-201ENST00000365039 107 ntBASIC1.78□□□□□ -2.12
HS3ST3A1Q9Y663 MIR520H-201ENST00000385126 88 ntBASIC1.78□□□□□ -2.12
HS3ST3A1Q9Y663 RNA5SP501-201ENST00000410990 112 ntBASIC1.78□□□□□ -2.12
HS3ST3A1Q9Y663 SNRPGP12-201ENST00000449481 213 ntBASIC1.78□□□□□ -2.12
HS3ST3A1Q9Y663 RNU7-43P-201ENST00000516554 64 ntBASIC1.78□□□□□ -2.12
HS3ST3A1Q9Y663 AP000942.3-201ENST00000603702 160 ntBASIC1.78□□□□□ -2.12
HS3ST3A1Q9Y663 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.78□□□□□ -2.13
HS3ST3A1Q9Y663 RNY1P2-201ENST00000364820 117 ntBASIC1.77□□□□□ -2.13
HS3ST3A1Q9Y663 SNORD38.2-201ENST00000384470 69 ntBASIC1.77□□□□□ -2.13
HS3ST3A1Q9Y663 RNU6-1067P-201ENST00000384752 107 ntBASIC1.77□□□□□ -2.13
HS3ST3A1Q9Y663 RNU6-1237P-201ENST00000384777 107 ntBASIC1.77□□□□□ -2.13
HS3ST3A1Q9Y663 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
HS3ST3A1Q9Y663 snoU13.27-201ENST00000459278 104 ntBASIC1.77□□□□□ -2.13
HS3ST3A1Q9Y663 RPS29P11-201ENST00000496507 171 ntBASIC1.77□□□□□ -2.13
HS3ST3A1Q9Y663 AL096840.1-201ENST00000603287 93 ntBASIC1.77□□□□□ -2.13
HS3ST3A1Q9Y663 AL627230.6-201ENST00000611129 280 ntBASIC1.77□□□□□ -2.13
HS3ST3A1Q9Y663 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.77□□□□□ -2.13
HS3ST3A1Q9Y663 WWP1P1-201ENST00000466609 2769 ntBASIC1.77□□□□□ -2.13
HS3ST3A1Q9Y663 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.77□□□□□ -2.13
HS3ST3A1Q9Y663 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.76□□□□□ -2.13
HS3ST3A1Q9Y663 RNU6-1094P-201ENST00000362416 104 ntBASIC1.76□□□□□ -2.13
HS3ST3A1Q9Y663 Y_RNA.168-201ENST00000363740 102 ntBASIC1.76□□□□□ -2.13
HS3ST3A1Q9Y663 SNORA16.1-201ENST00000364597 132 ntBASIC1.76□□□□□ -2.13
HS3ST3A1Q9Y663 RNA5SP190-201ENST00000365222 118 ntBASIC1.76□□□□□ -2.13
HS3ST3A1Q9Y663 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
HS3ST3A1Q9Y663 AC138749.4-201ENST00000563970 127 ntBASIC1.76□□□□□ -2.13
HS3ST3A1Q9Y663 MIR4709-201ENST00000577272 72 ntBASIC1.76□□□□□ -2.13
HS3ST3A1Q9Y663 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.76□□□□□ -2.13
HS3ST3A1Q9Y663 AL662814.1-201ENST00000617364 121 ntBASIC1.76□□□□□ -2.13
HS3ST3A1Q9Y663 AP000553.5-201ENST00000641933 54 ntBASIC1.76□□□□□ -2.13
HS3ST3A1Q9Y663 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
HS3ST3A1Q9Y663 RNU4-32P-201ENST00000363404 141 ntBASIC1.75□□□□□ -2.13
HS3ST3A1Q9Y663 RNU6-949P-201ENST00000384040 107 ntBASIC1.75□□□□□ -2.13
HS3ST3A1Q9Y663 MIR194-1-201ENST00000384892 85 ntBASIC1.75□□□□□ -2.13
HS3ST3A1Q9Y663 MIR676-201ENST00000390702 67 ntBASIC1.75□□□□□ -2.13
HS3ST3A1Q9Y663 RNA5SP212-201ENST00000391223 107 ntBASIC1.75□□□□□ -2.13
HS3ST3A1Q9Y663 MIR1302-7-201ENST00000408841 72 ntBASIC1.75□□□□□ -2.13
HS3ST3A1Q9Y663 RNU7-41P-201ENST00000515917 61 ntBASIC1.75□□□□□ -2.13
HS3ST3A1Q9Y663 AC090897.1-201ENST00000580909 226 ntBASIC1.75□□□□□ -2.13
HS3ST3A1Q9Y663 MIR502-201ENST00000606349 86 ntBASIC1.75□□□□□ -2.13
HS3ST3A1Q9Y663 AL512598.1-201ENST00000610158 273 ntBASIC1.75□□□□□ -2.13
HS3ST3A1Q9Y663 MIR8066-201ENST00000617280 78 ntBASIC1.75□□□□□ -2.13
HS3ST3A1Q9Y663 Y_RNA.508-201ENST00000384502 114 ntBASIC1.74□□□□□ -2.13
HS3ST3A1Q9Y663 MIR563-201ENST00000385080 79 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 204.9 ms