Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC019176.1-201ENST00000518519 225 ntBASIC2.23□□□□□ -2.05
PCDHGA11Q9Y5H2 AC020891.4-201ENST00000605745 93 ntBASIC2.23□□□□□ -2.05
PCDHGA11Q9Y5H2 AC046143.2-201ENST00000609789 160 ntBASIC2.23□□□□□ -2.05
PCDHGA11Q9Y5H2 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
PCDHGA11Q9Y5H2 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
PCDHGA11Q9Y5H2 RNU4-58P-201ENST00000363192 141 ntBASIC2.22□□□□□ -2.05
PCDHGA11Q9Y5H2 RNU6-580P-201ENST00000365159 107 ntBASIC2.22□□□□□ -2.05
PCDHGA11Q9Y5H2 RNU6-652P-201ENST00000365488 107 ntBASIC2.22□□□□□ -2.05
PCDHGA11Q9Y5H2 RNU6-301P-201ENST00000384277 107 ntBASIC2.22□□□□□ -2.05
PCDHGA11Q9Y5H2 SNORD93-201ENST00000408813 74 ntBASIC2.22□□□□□ -2.05
PCDHGA11Q9Y5H2 BX276092.1-201ENST00000427368 251 ntBASIC2.22□□□□□ -2.05
PCDHGA11Q9Y5H2 AC104435.1-201ENST00000483483 166 ntBASIC2.22□□□□□ -2.05
PCDHGA11Q9Y5H2 MIR3664-201ENST00000579074 99 ntBASIC2.22□□□□□ -2.05
PCDHGA11Q9Y5H2 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.22□□□□□ -2.05
PCDHGA11Q9Y5H2 AL627230.6-201ENST00000611129 280 ntBASIC2.22□□□□□ -2.05
PCDHGA11Q9Y5H2 MIR6766-201ENST00000622641 72 ntBASIC2.22□□□□□ -2.05
PCDHGA11Q9Y5H2 RNU6-24P-201ENST00000384440 107 ntBASIC2.21□□□□□ -2.06
PCDHGA11Q9Y5H2 Y_RNA.510-201ENST00000384511 114 ntBASIC2.21□□□□□ -2.06
PCDHGA11Q9Y5H2 MIR1236-201ENST00000408340 102 ntBASIC2.21□□□□□ -2.06
PCDHGA11Q9Y5H2 RNU4-83P-201ENST00000410863 133 ntBASIC2.21□□□□□ -2.06
PCDHGA11Q9Y5H2 RNA5SP233-201ENST00000459153 113 ntBASIC2.21□□□□□ -2.06
PCDHGA11Q9Y5H2 AC005908.1-201ENST00000468701 347 ntBASIC2.21□□□□□ -2.06
PCDHGA11Q9Y5H2 MIR4448-201ENST00000584360 86 ntBASIC2.21□□□□□ -2.06
PCDHGA11Q9Y5H2 ZNF658B-202ENST00000615961 3375 ntBASIC2.2□□□□□ -2.06
PCDHGA11Q9Y5H2 MIRLET7G-201ENST00000362280 84 ntBASIC2.2□□□□□ -2.06
PCDHGA11Q9Y5H2 Y_RNA.244-201ENST00000364484 109 ntBASIC2.2□□□□□ -2.06
PCDHGA11Q9Y5H2 RNU4-52P-201ENST00000384209 138 ntBASIC2.2□□□□□ -2.06
PCDHGA11Q9Y5H2 MIR634-201ENST00000385208 97 ntBASIC2.2□□□□□ -2.06
PCDHGA11Q9Y5H2 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.2□□□□□ -2.06
PCDHGA11Q9Y5H2 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.2□□□□□ -2.06
PCDHGA11Q9Y5H2 RNU6-654P-201ENST00000364373 107 ntBASIC2.19□□□□□ -2.06
PCDHGA11Q9Y5H2 SNORD115-27-201ENST00000364430 82 ntBASIC2.19□□□□□ -2.06
PCDHGA11Q9Y5H2 RNU6-524P-201ENST00000384270 107 ntBASIC2.19□□□□□ -2.06
PCDHGA11Q9Y5H2 RNU6-857P-201ENST00000515893 110 ntBASIC2.19□□□□□ -2.06
PCDHGA11Q9Y5H2 MIR3198-2-201ENST00000577868 80 ntBASIC2.19□□□□□ -2.06
PCDHGA11Q9Y5H2 SNORD53-201ENST00000579969 78 ntBASIC2.19□□□□□ -2.06
PCDHGA11Q9Y5H2 MIR4491-201ENST00000581087 68 ntBASIC2.19□□□□□ -2.06
PCDHGA11Q9Y5H2 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
PCDHGA11Q9Y5H2 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PCDHGA11Q9Y5H2 SNORD4B-201ENST00000459083 72 ntBASIC2.18□□□□□ -2.06
PCDHGA11Q9Y5H2 Y_RNA.648-201ENST00000459455 110 ntBASIC2.18□□□□□ -2.06
PCDHGA11Q9Y5H2 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.18□□□□□ -2.06
PCDHGA11Q9Y5H2 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
PCDHGA11Q9Y5H2 SNORA72.6-201ENST00000384520 129 ntBASIC2.17□□□□□ -2.06
PCDHGA11Q9Y5H2 AC087499.7-201ENST00000441958 109 ntBASIC2.17□□□□□ -2.06
PCDHGA11Q9Y5H2 MIR514B-201ENST00000516774 80 ntBASIC2.17□□□□□ -2.06
PCDHGA11Q9Y5H2 Y_RNA.316-201ENST00000365118 111 ntBASIC2.16□□□□□ -2.06
PCDHGA11Q9Y5H2 RNU1-36P-201ENST00000365130 165 ntBASIC2.16□□□□□ -2.06
PCDHGA11Q9Y5H2 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
PCDHGA11Q9Y5H2 RNU6-243P-201ENST00000391140 107 ntBASIC2.16□□□□□ -2.06
PCDHGA11Q9Y5H2 RNU6-1254P-201ENST00000391266 104 ntBASIC2.16□□□□□ -2.06
PCDHGA11Q9Y5H2 RNA5SP95-201ENST00000410319 137 ntBASIC2.16□□□□□ -2.06
PCDHGA11Q9Y5H2 HMGN2P19-201ENST00000425149 265 ntBASIC2.16□□□□□ -2.06
PCDHGA11Q9Y5H2 AC023790.1-201ENST00000482174 347 ntBASIC2.16□□□□□ -2.06
PCDHGA11Q9Y5H2 RNU6-531P-201ENST00000516694 104 ntBASIC2.16□□□□□ -2.06
PCDHGA11Q9Y5H2 uc_338.6-201ENST00000613544 171 ntBASIC2.16□□□□□ -2.06
PCDHGA11Q9Y5H2 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
PCDHGA11Q9Y5H2 RNU6-403P-201ENST00000363163 104 ntBASIC2.15□□□□□ -2.07
PCDHGA11Q9Y5H2 SNORA67.4-201ENST00000384688 142 ntBASIC2.15□□□□□ -2.07
PCDHGA11Q9Y5H2 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
PCDHGA11Q9Y5H2 AL512310.8-201ENST00000550183 120 ntBASIC2.15□□□□□ -2.07
PCDHGA11Q9Y5H2 AC019288.1-201ENST00000557918 224 ntBASIC2.15□□□□□ -2.07
PCDHGA11Q9Y5H2 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
PCDHGA11Q9Y5H2 RNU4-32P-201ENST00000363404 141 ntBASIC2.14□□□□□ -2.07
PCDHGA11Q9Y5H2 SNORA48.3-201ENST00000391081 134 ntBASIC2.14□□□□□ -2.07
PCDHGA11Q9Y5H2 RPL23AP42-201ENST00000471152 471 ntBASIC2.14□□□□□ -2.07
PCDHGA11Q9Y5H2 RNU6-1194P-201ENST00000516208 104 ntBASIC2.14□□□□□ -2.07
PCDHGA11Q9Y5H2 RNA5SP200-201ENST00000516360 103 ntBASIC2.14□□□□□ -2.07
PCDHGA11Q9Y5H2 MIR4672-201ENST00000583126 81 ntBASIC2.14□□□□□ -2.07
PCDHGA11Q9Y5H2 RNU7-10P-201ENST00000607194 63 ntBASIC2.14□□□□□ -2.07
PCDHGA11Q9Y5H2 MIR6132-201ENST00000622083 109 ntBASIC2.14□□□□□ -2.07
PCDHGA11Q9Y5H2 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
PCDHGA11Q9Y5H2 MIR101-2-201ENST00000362195 79 ntBASIC2.13□□□□□ -2.07
PCDHGA11Q9Y5H2 SNORD113.3-201ENST00000364630 78 ntBASIC2.13□□□□□ -2.07
PCDHGA11Q9Y5H2 MIR221-201ENST00000385135 110 ntBASIC2.13□□□□□ -2.07
PCDHGA11Q9Y5H2 Y_RNA.588-201ENST00000391254 102 ntBASIC2.13□□□□□ -2.07
PCDHGA11Q9Y5H2 MIR1257-201ENST00000408490 117 ntBASIC2.13□□□□□ -2.07
PCDHGA11Q9Y5H2 RNA5SP338-201ENST00000410495 85 ntBASIC2.13□□□□□ -2.07
PCDHGA11Q9Y5H2 RNU6-1054P-201ENST00000411293 104 ntBASIC2.13□□□□□ -2.07
PCDHGA11Q9Y5H2 RNU6-65P-201ENST00000516332 98 ntBASIC2.13□□□□□ -2.07
PCDHGA11Q9Y5H2 SNORA25.16-201ENST00000516741 121 ntBASIC2.13□□□□□ -2.07
PCDHGA11Q9Y5H2 MIR4536-1-201ENST00000583537 88 ntBASIC2.13□□□□□ -2.07
PCDHGA11Q9Y5H2 MIR4662A-201ENST00000637499 67 ntBASIC2.13□□□□□ -2.07
PCDHGA11Q9Y5H2 AC023934.1-201ENST00000574529 2389 ntBASIC2.13□□□□□ -2.07
PCDHGA11Q9Y5H2 RNA5SP289-201ENST00000362332 137 ntBASIC2.12□□□□□ -2.07
PCDHGA11Q9Y5H2 Y_RNA.330-201ENST00000365230 109 ntBASIC2.12□□□□□ -2.07
PCDHGA11Q9Y5H2 MIR516A2-201ENST00000384888 90 ntBASIC2.12□□□□□ -2.07
PCDHGA11Q9Y5H2 MIR516A1-201ENST00000385033 90 ntBASIC2.12□□□□□ -2.07
PCDHGA11Q9Y5H2 RNU1-78P-201ENST00000391248 165 ntBASIC2.12□□□□□ -2.07
PCDHGA11Q9Y5H2 AL356379.1-201ENST00000414105 126 ntBASIC2.12□□□□□ -2.07
PCDHGA11Q9Y5H2 RNU7-185P-201ENST00000459215 60 ntBASIC2.12□□□□□ -2.07
PCDHGA11Q9Y5H2 RNU6-165P-201ENST00000517170 99 ntBASIC2.12□□□□□ -2.07
PCDHGA11Q9Y5H2 AC140658.3-201ENST00000567603 271 ntBASIC2.12□□□□□ -2.07
PCDHGA11Q9Y5H2 MIR4422-201ENST00000581938 83 ntBASIC2.12□□□□□ -2.07
PCDHGA11Q9Y5H2 SNORD36A-201ENST00000362874 73 ntBASIC2.11□□□□□ -2.07
PCDHGA11Q9Y5H2 U8.2-201ENST00000363156 134 ntBASIC2.11□□□□□ -2.07
PCDHGA11Q9Y5H2 RNA5SP37-201ENST00000365420 130 ntBASIC2.11□□□□□ -2.07
PCDHGA11Q9Y5H2 AC008413.1-201ENST00000511864 177 ntBASIC2.11□□□□□ -2.07
PCDHGA11Q9Y5H2 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.11□□□□□ -2.07
PCDHGA11Q9Y5H2 MIR635-201ENST00000384830 98 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms