Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AP001362.1-201ENST00000625165 124 ntBASIC2.34□□□□□ -2.03
RTCBQ9Y3I0 RNA5SP138-201ENST00000365098 114 ntBASIC2.33□□□□□ -2.04
RTCBQ9Y3I0 MIR499A-201ENST00000384903 122 ntBASIC2.33□□□□□ -2.04
RTCBQ9Y3I0 SNORA67.5-201ENST00000391036 107 ntBASIC2.33□□□□□ -2.04
RTCBQ9Y3I0 AC244023.1-201ENST00000426884 112 ntBASIC2.33□□□□□ -2.04
RTCBQ9Y3I0 AC027119.1-201ENST00000440877 241 ntBASIC2.33□□□□□ -2.04
RTCBQ9Y3I0 RNA5SP445-201ENST00000515889 115 ntBASIC2.33□□□□□ -2.04
RTCBQ9Y3I0 MTND5P40-201ENST00000559945 246 ntBASIC2.33□□□□□ -2.04
RTCBQ9Y3I0 AC242498.1-201ENST00000604134 111 ntBASIC2.33□□□□□ -2.04
RTCBQ9Y3I0 PRELID3BP2-201ENST00000605362 201 ntBASIC2.33□□□□□ -2.04
RTCBQ9Y3I0 AC012676.2-201ENST00000619258 186 ntBASIC2.33□□□□□ -2.04
RTCBQ9Y3I0 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.33□□□□□ -2.04
RTCBQ9Y3I0 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
RTCBQ9Y3I0 WWP1P1-201ENST00000466609 2769 ntBASIC2.32□□□□□ -2.04
RTCBQ9Y3I0 AL596028.1-201ENST00000326971 197 ntBASIC2.32□□□□□ -2.04
RTCBQ9Y3I0 Y_RNA.508-201ENST00000384502 114 ntBASIC2.32□□□□□ -2.04
RTCBQ9Y3I0 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
RTCBQ9Y3I0 RNU1-98P-201ENST00000458992 160 ntBASIC2.32□□□□□ -2.04
RTCBQ9Y3I0 snoU13.2-201ENST00000459201 104 ntBASIC2.32□□□□□ -2.04
RTCBQ9Y3I0 AC133485.1-201ENST00000567176 124 ntBASIC2.32□□□□□ -2.04
RTCBQ9Y3I0 MIR4303-201ENST00000581299 66 ntBASIC2.32□□□□□ -2.04
RTCBQ9Y3I0 MIR3192-201ENST00000584920 77 ntBASIC2.32□□□□□ -2.04
RTCBQ9Y3I0 AL773524.1-201ENST00000614065 229 ntBASIC2.32□□□□□ -2.04
RTCBQ9Y3I0 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
RTCBQ9Y3I0 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
RTCBQ9Y3I0 Y_RNA.173-201ENST00000363776 113 ntBASIC2.31□□□□□ -2.04
RTCBQ9Y3I0 RNA5SP160-201ENST00000364866 120 ntBASIC2.31□□□□□ -2.04
RTCBQ9Y3I0 AC079804.2-201ENST00000490376 200 ntBASIC2.31□□□□□ -2.04
RTCBQ9Y3I0 AC015688.6-201ENST00000577737 104 ntBASIC2.31□□□□□ -2.04
RTCBQ9Y3I0 AP000553.5-201ENST00000641933 54 ntBASIC2.31□□□□□ -2.04
RTCBQ9Y3I0 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
RTCBQ9Y3I0 RNU6-949P-201ENST00000384040 107 ntBASIC2.3□□□□□ -2.04
RTCBQ9Y3I0 MIR1255A-201ENST00000408338 113 ntBASIC2.3□□□□□ -2.04
RTCBQ9Y3I0 RNU7-171P-201ENST00000459581 62 ntBASIC2.3□□□□□ -2.04
RTCBQ9Y3I0 AC025033.1-201ENST00000463883 194 ntBASIC2.3□□□□□ -2.04
RTCBQ9Y3I0 MIR4255-201ENST00000579351 72 ntBASIC2.3□□□□□ -2.04
RTCBQ9Y3I0 AL096861.1-201ENST00000610899 123 ntBASIC2.3□□□□□ -2.04
RTCBQ9Y3I0 Y_RNA.118-201ENST00000363300 101 ntBASIC2.29□□□□□ -2.04
RTCBQ9Y3I0 RNU6-1125P-201ENST00000363601 107 ntBASIC2.29□□□□□ -2.04
RTCBQ9Y3I0 RNU6-396P-201ENST00000365369 105 ntBASIC2.29□□□□□ -2.04
RTCBQ9Y3I0 Y_RNA.355-201ENST00000365462 98 ntBASIC2.29□□□□□ -2.04
RTCBQ9Y3I0 Y_RNA.426-201ENST00000384068 113 ntBASIC2.29□□□□□ -2.04
RTCBQ9Y3I0 RNU6-480P-201ENST00000384332 107 ntBASIC2.29□□□□□ -2.04
RTCBQ9Y3I0 Y_RNA.609-201ENST00000410669 89 ntBASIC2.29□□□□□ -2.04
RTCBQ9Y3I0 AC244636.1-201ENST00000421152 228 ntBASIC2.29□□□□□ -2.04
RTCBQ9Y3I0 HSPE1P24-201ENST00000450782 238 ntBASIC2.29□□□□□ -2.04
RTCBQ9Y3I0 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.29□□□□□ -2.04
RTCBQ9Y3I0 SNORA77B-201ENST00000578179 125 ntBASIC2.29□□□□□ -2.04
RTCBQ9Y3I0 GHRLOS.1-201ENST00000610995 70 ntBASIC2.29□□□□□ -2.04
RTCBQ9Y3I0 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
RTCBQ9Y3I0 RNY1P2-201ENST00000364820 117 ntBASIC2.28□□□□□ -2.04
RTCBQ9Y3I0 SNORA25.9-201ENST00000365087 128 ntBASIC2.28□□□□□ -2.04
RTCBQ9Y3I0 MIR588-201ENST00000384900 83 ntBASIC2.28□□□□□ -2.04
RTCBQ9Y3I0 RNA5SP225-201ENST00000410874 135 ntBASIC2.28□□□□□ -2.04
RTCBQ9Y3I0 MIR4666B-201ENST00000578142 81 ntBASIC2.28□□□□□ -2.04
RTCBQ9Y3I0 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.28□□□□□ -2.04
RTCBQ9Y3I0 MIR502-201ENST00000606349 86 ntBASIC2.28□□□□□ -2.04
RTCBQ9Y3I0 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
RTCBQ9Y3I0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
RTCBQ9Y3I0 HSBP1P2-201ENST00000299671 229 ntBASIC2.27□□□□□ -2.05
RTCBQ9Y3I0 SNORA16B-201ENST00000364674 135 ntBASIC2.27□□□□□ -2.05
RTCBQ9Y3I0 RNA5SP37-201ENST00000365420 130 ntBASIC2.27□□□□□ -2.05
RTCBQ9Y3I0 RNU6-787P-201ENST00000384032 107 ntBASIC2.27□□□□□ -2.05
RTCBQ9Y3I0 MIR17-201ENST00000385012 84 ntBASIC2.27□□□□□ -2.05
RTCBQ9Y3I0 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
RTCBQ9Y3I0 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.27□□□□□ -2.05
RTCBQ9Y3I0 MIR1302-7-201ENST00000408841 72 ntBASIC2.27□□□□□ -2.05
RTCBQ9Y3I0 RNA5SP338-201ENST00000410495 85 ntBASIC2.27□□□□□ -2.05
RTCBQ9Y3I0 MIR514B-201ENST00000516774 80 ntBASIC2.27□□□□□ -2.05
RTCBQ9Y3I0 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.27□□□□□ -2.05
RTCBQ9Y3I0 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
RTCBQ9Y3I0 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.26□□□□□ -2.05
RTCBQ9Y3I0 RNU6-633P-201ENST00000362612 103 ntBASIC2.26□□□□□ -2.05
RTCBQ9Y3I0 RNU6-509P-201ENST00000363519 107 ntBASIC2.26□□□□□ -2.05
RTCBQ9Y3I0 Y_RNA.191-201ENST00000363972 113 ntBASIC2.26□□□□□ -2.05
RTCBQ9Y3I0 MIR181B2-201ENST00000385004 89 ntBASIC2.26□□□□□ -2.05
RTCBQ9Y3I0 Y_RNA.611-201ENST00000410682 108 ntBASIC2.26□□□□□ -2.05
RTCBQ9Y3I0 AC090255.1-201ENST00000495779 349 ntBASIC2.26□□□□□ -2.05
RTCBQ9Y3I0 RNA5SP395-201ENST00000516567 118 ntBASIC2.26□□□□□ -2.05
RTCBQ9Y3I0 AL513043.2-201ENST00000573941 143 ntBASIC2.26□□□□□ -2.05
RTCBQ9Y3I0 MIR8074-201ENST00000615081 81 ntBASIC2.26□□□□□ -2.05
RTCBQ9Y3I0 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
RTCBQ9Y3I0 SNORA25.3-201ENST00000363205 127 ntBASIC2.25□□□□□ -2.05
RTCBQ9Y3I0 MIR563-201ENST00000385080 79 ntBASIC2.25□□□□□ -2.05
RTCBQ9Y3I0 HMGN2P38-201ENST00000423806 265 ntBASIC2.25□□□□□ -2.05
RTCBQ9Y3I0 RPS27P21-201ENST00000486977 252 ntBASIC2.25□□□□□ -2.05
RTCBQ9Y3I0 RNU1-40P-201ENST00000516816 164 ntBASIC2.25□□□□□ -2.05
RTCBQ9Y3I0 RNU1-97P-201ENST00000516872 164 ntBASIC2.25□□□□□ -2.05
RTCBQ9Y3I0 MIR4713-201ENST00000582691 75 ntBASIC2.25□□□□□ -2.05
RTCBQ9Y3I0 MIR4264-201ENST00000583520 66 ntBASIC2.25□□□□□ -2.05
RTCBQ9Y3I0 AP000753.3-201ENST00000604083 169 ntBASIC2.25□□□□□ -2.05
RTCBQ9Y3I0 MIR548BB-201ENST00000626714 66 ntBASIC2.25□□□□□ -2.05
RTCBQ9Y3I0 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RTCBQ9Y3I0 Y_RNA.437-201ENST00000384113 113 ntBASIC2.24□□□□□ -2.05
RTCBQ9Y3I0 SNORA2B-201ENST00000384583 137 ntBASIC2.24□□□□□ -2.05
RTCBQ9Y3I0 AL161932.1-201ENST00000437408 146 ntBASIC2.24□□□□□ -2.05
RTCBQ9Y3I0 RNU7-95P-201ENST00000459222 64 ntBASIC2.24□□□□□ -2.05
RTCBQ9Y3I0 RNU6-947P-201ENST00000516264 106 ntBASIC2.24□□□□□ -2.05
RTCBQ9Y3I0 MIR4287-201ENST00000579398 78 ntBASIC2.24□□□□□ -2.05
RTCBQ9Y3I0 AL512598.1-201ENST00000610158 273 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms