Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 MIR539-201ENST00000365690 78 ntBASIC-1.08□□□□□ -2.58
HDGFL3Q9Y3E1 AL606845.1-201ENST00000404881 255 ntBASIC-1.08□□□□□ -2.58
HDGFL3Q9Y3E1 Y_RNA.718-201ENST00000517110 102 ntBASIC-1.08□□□□□ -2.58
HDGFL3Q9Y3E1 YWHAEP2-201ENST00000580066 112 ntBASIC-1.08□□□□□ -2.58
HDGFL3Q9Y3E1 MIR3681-201ENST00000580089 72 ntBASIC-1.08□□□□□ -2.58
HDGFL3Q9Y3E1 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.08□□□□□ -2.58
HDGFL3Q9Y3E1 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.08□□□□□ -2.58
HDGFL3Q9Y3E1 Y_RNA.120-201ENST00000363304 110 ntBASIC-1.09□□□□□ -2.58
HDGFL3Q9Y3E1 Y_RNA.183-201ENST00000363882 113 ntBASIC-1.09□□□□□ -2.58
HDGFL3Q9Y3E1 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.09□□□□□ -2.58
HDGFL3Q9Y3E1 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.09□□□□□ -2.58
HDGFL3Q9Y3E1 MIR548I2-201ENST00000408348 149 ntBASIC-1.09□□□□□ -2.58
HDGFL3Q9Y3E1 RNU7-152P-201ENST00000458982 64 ntBASIC-1.09□□□□□ -2.58
HDGFL3Q9Y3E1 AC006504.6-201ENST00000590142 199 ntBASIC-1.09□□□□□ -2.58
HDGFL3Q9Y3E1 AC080013.6-201ENST00000606185 215 ntBASIC-1.09□□□□□ -2.58
HDGFL3Q9Y3E1 Y_RNA.160-201ENST00000363677 92 ntBASIC-1.1□□□□□ -2.59
HDGFL3Q9Y3E1 Y_RNA.187-201ENST00000363918 113 ntBASIC-1.1□□□□□ -2.59
HDGFL3Q9Y3E1 Y_RNA.387-201ENST00000383918 102 ntBASIC-1.1□□□□□ -2.59
HDGFL3Q9Y3E1 RNY1P7-201ENST00000384743 110 ntBASIC-1.1□□□□□ -2.59
HDGFL3Q9Y3E1 MIR616-201ENST00000385293 97 ntBASIC-1.1□□□□□ -2.59
HDGFL3Q9Y3E1 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.1□□□□□ -2.59
HDGFL3Q9Y3E1 RNU6-138P-201ENST00000515952 107 ntBASIC-1.1□□□□□ -2.59
HDGFL3Q9Y3E1 Y_RNA.661-201ENST00000516003 99 ntBASIC-1.1□□□□□ -2.59
HDGFL3Q9Y3E1 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.1□□□□□ -2.59
HDGFL3Q9Y3E1 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.1□□□□□ -2.59
HDGFL3Q9Y3E1 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-1.1□□□□□ -2.59
HDGFL3Q9Y3E1 RNU6-211P-201ENST00000384047 107 ntBASIC-1.11□□□□□ -2.59
HDGFL3Q9Y3E1 RNY1P6-201ENST00000384193 109 ntBASIC-1.11□□□□□ -2.59
HDGFL3Q9Y3E1 RNU6-1215P-201ENST00000384441 102 ntBASIC-1.11□□□□□ -2.59
HDGFL3Q9Y3E1 MIR519E-201ENST00000385075 84 ntBASIC-1.11□□□□□ -2.59
HDGFL3Q9Y3E1 AC082651.2-201ENST00000496833 166 ntBASIC-1.11□□□□□ -2.59
HDGFL3Q9Y3E1 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.11□□□□□ -2.59
HDGFL3Q9Y3E1 RNU6-1149P-201ENST00000516810 97 ntBASIC-1.11□□□□□ -2.59
HDGFL3Q9Y3E1 MIR4500-201ENST00000579472 76 ntBASIC-1.11□□□□□ -2.59
HDGFL3Q9Y3E1 MIR548AG2-201ENST00000581228 64 ntBASIC-1.11□□□□□ -2.59
HDGFL3Q9Y3E1 MIR548AE1-201ENST00000583292 70 ntBASIC-1.11□□□□□ -2.59
HDGFL3Q9Y3E1 MIR548AE2-201ENST00000583456 67 ntBASIC-1.11□□□□□ -2.59
HDGFL3Q9Y3E1 MIR6086-201ENST00000638065 55 ntBASIC-1.11□□□□□ -2.59
HDGFL3Q9Y3E1 UBE2WP1-201ENST00000362030 340 ntBASIC-1.12□□□□□ -2.59
HDGFL3Q9Y3E1 Y_RNA.5-201ENST00000362334 102 ntBASIC-1.12□□□□□ -2.59
HDGFL3Q9Y3E1 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.12□□□□□ -2.59
HDGFL3Q9Y3E1 Y_RNA.541-201ENST00000384640 113 ntBASIC-1.12□□□□□ -2.59
HDGFL3Q9Y3E1 MIR617-201ENST00000385030 97 ntBASIC-1.12□□□□□ -2.59
HDGFL3Q9Y3E1 MIR196A1-201ENST00000388006 70 ntBASIC-1.12□□□□□ -2.59
HDGFL3Q9Y3E1 RNU7-195P-201ENST00000458793 62 ntBASIC-1.12□□□□□ -2.59
HDGFL3Q9Y3E1 AC021146.6-201ENST00000514659 117 ntBASIC-1.12□□□□□ -2.59
HDGFL3Q9Y3E1 RNU6-453P-201ENST00000516819 85 ntBASIC-1.12□□□□□ -2.59
HDGFL3Q9Y3E1 AC037487.3-201ENST00000606668 112 ntBASIC-1.12□□□□□ -2.59
HDGFL3Q9Y3E1 AC084781.2-201ENST00000615568 161 ntBASIC-1.12□□□□□ -2.59
HDGFL3Q9Y3E1 AC112487.2-201ENST00000637950 304 ntBASIC-1.12□□□□□ -2.59
HDGFL3Q9Y3E1 RNU6-623P-201ENST00000363143 105 ntBASIC-1.13□□□□□ -2.59
HDGFL3Q9Y3E1 Y_RNA.176-201ENST00000363815 109 ntBASIC-1.13□□□□□ -2.59
HDGFL3Q9Y3E1 snoU2_19.4-201ENST00000364329 80 ntBASIC-1.13□□□□□ -2.59
HDGFL3Q9Y3E1 RNU6-900P-201ENST00000384498 102 ntBASIC-1.13□□□□□ -2.59
HDGFL3Q9Y3E1 IGKV1-22-201ENST00000524313 326 ntBASIC-1.13□□□□□ -2.59
HDGFL3Q9Y3E1 AP001328.1-201ENST00000528550 176 ntBASIC-1.13□□□□□ -2.59
HDGFL3Q9Y3E1 RNU6-524P-201ENST00000384270 107 ntBASIC-1.14□□□□□ -2.59
HDGFL3Q9Y3E1 RNU6-154P-201ENST00000384306 106 ntBASIC-1.14□□□□□ -2.59
HDGFL3Q9Y3E1 MIR204-201ENST00000385200 110 ntBASIC-1.14□□□□□ -2.59
HDGFL3Q9Y3E1 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.14□□□□□ -2.59
HDGFL3Q9Y3E1 MIR1302-11-201ENST00000408051 138 ntBASIC-1.14□□□□□ -2.59
HDGFL3Q9Y3E1 MIR1302-9-201ENST00000408365 138 ntBASIC-1.14□□□□□ -2.59
HDGFL3Q9Y3E1 MIR1302-10-201ENST00000408734 138 ntBASIC-1.14□□□□□ -2.59
HDGFL3Q9Y3E1 SNORD63B-201ENST00000411005 70 ntBASIC-1.14□□□□□ -2.59
HDGFL3Q9Y3E1 MIR1302-2-201ENST00000607096 138 ntBASIC-1.14□□□□□ -2.59
HDGFL3Q9Y3E1 Y_RNA.154-201ENST00000363624 102 ntBASIC-1.15□□□□□ -2.59
HDGFL3Q9Y3E1 RNY4P3-201ENST00000365254 95 ntBASIC-1.15□□□□□ -2.59
HDGFL3Q9Y3E1 SNORA63.7-201ENST00000365579 123 ntBASIC-1.15□□□□□ -2.59
HDGFL3Q9Y3E1 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.15□□□□□ -2.59
HDGFL3Q9Y3E1 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.15□□□□□ -2.59
HDGFL3Q9Y3E1 SNORA79-201ENST00000408376 140 ntBASIC-1.15□□□□□ -2.59
HDGFL3Q9Y3E1 MIR4280-201ENST00000582178 76 ntBASIC-1.15□□□□□ -2.59
HDGFL3Q9Y3E1 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.16□□□□□ -2.6
HDGFL3Q9Y3E1 SNORD115-44-201ENST00000365391 82 ntBASIC-1.16□□□□□ -2.6
HDGFL3Q9Y3E1 Y_RNA.390-201ENST00000383932 102 ntBASIC-1.16□□□□□ -2.6
HDGFL3Q9Y3E1 SNORD56B-201ENST00000384713 71 ntBASIC-1.16□□□□□ -2.6
HDGFL3Q9Y3E1 MIR624-201ENST00000385217 97 ntBASIC-1.16□□□□□ -2.6
HDGFL3Q9Y3E1 RNU4-43P-201ENST00000410628 137 ntBASIC-1.16□□□□□ -2.6
HDGFL3Q9Y3E1 AL445193.1-201ENST00000441183 141 ntBASIC-1.16□□□□□ -2.6
HDGFL3Q9Y3E1 RNU6-976P-201ENST00000516086 111 ntBASIC-1.16□□□□□ -2.6
HDGFL3Q9Y3E1 RNU6-561P-201ENST00000516222 102 ntBASIC-1.16□□□□□ -2.6
HDGFL3Q9Y3E1 RNU6-277P-201ENST00000516272 106 ntBASIC-1.16□□□□□ -2.6
HDGFL3Q9Y3E1 MIR4460-201ENST00000577862 86 ntBASIC-1.16□□□□□ -2.6
HDGFL3Q9Y3E1 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.17□□□□□ -2.6
HDGFL3Q9Y3E1 RNU6-978P-201ENST00000364371 103 ntBASIC-1.17□□□□□ -2.6
HDGFL3Q9Y3E1 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.17□□□□□ -2.6
HDGFL3Q9Y3E1 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.17□□□□□ -2.6
HDGFL3Q9Y3E1 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.17□□□□□ -2.6
HDGFL3Q9Y3E1 Z83846.1-201ENST00000446798 265 ntBASIC-1.17□□□□□ -2.6
HDGFL3Q9Y3E1 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.17□□□□□ -2.6
HDGFL3Q9Y3E1 RNU7-48P-201ENST00000458875 63 ntBASIC-1.17□□□□□ -2.6
HDGFL3Q9Y3E1 MIR1270-201ENST00000459320 83 ntBASIC-1.17□□□□□ -2.6
HDGFL3Q9Y3E1 AC090574.1-201ENST00000623186 233 ntBASIC-1.17□□□□□ -2.6
HDGFL3Q9Y3E1 RNU6-170P-201ENST00000362832 104 ntBASIC-1.18□□□□□ -2.6
HDGFL3Q9Y3E1 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.18□□□□□ -2.6
HDGFL3Q9Y3E1 MT-TL1-201ENST00000386347 75 ntBASIC-1.18□□□□□ -2.6
HDGFL3Q9Y3E1 RNU6-121P-201ENST00000410525 99 ntBASIC-1.18□□□□□ -2.6
HDGFL3Q9Y3E1 FGF7P6-202ENST00000451282 293 ntBASIC-1.18□□□□□ -2.6
HDGFL3Q9Y3E1 SNORA13-201ENST00000458790 133 ntBASIC-1.18□□□□□ -2.6
HDGFL3Q9Y3E1 snoU13.19-201ENST00000459148 104 ntBASIC-1.18□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 236.5 ms