Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.02□□□□□ -2.25
DDX56Q9NY93 RNU6-1061P-201ENST00000516530 99 ntBASIC1.02□□□□□ -2.25
DDX56Q9NY93 RNU7-156P-201ENST00000517214 74 ntBASIC1.02□□□□□ -2.25
DDX56Q9NY93 Y_RNA.4-201ENST00000362333 112 ntBASIC1.01□□□□□ -2.25
DDX56Q9NY93 MT-TI-201ENST00000387365 69 ntBASIC1.01□□□□□ -2.25
DDX56Q9NY93 RPL39P28-201ENST00000465655 155 ntBASIC1.01□□□□□ -2.25
DDX56Q9NY93 AC011195.1-201ENST00000578177 177 ntBASIC1.01□□□□□ -2.25
DDX56Q9NY93 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1□□□□□ -2.25
DDX56Q9NY93 AC096949.1-201ENST00000412047 152 ntBASIC1□□□□□ -2.25
DDX56Q9NY93 Y_RNA.676-201ENST00000516393 96 ntBASIC1□□□□□ -2.25
DDX56Q9NY93 SNORD67.1-201ENST00000516618 108 ntBASIC1□□□□□ -2.25
DDX56Q9NY93 MIR4653-201ENST00000585107 83 ntBASIC1□□□□□ -2.25
DDX56Q9NY93 Y_RNA.164-201ENST00000363709 102 ntBASIC0.99□□□□□ -2.25
DDX56Q9NY93 Y_RNA.528-201ENST00000384575 108 ntBASIC0.99□□□□□ -2.25
DDX56Q9NY93 RNU4-83P-201ENST00000410863 133 ntBASIC0.99□□□□□ -2.25
DDX56Q9NY93 RNA5SP136-201ENST00000410906 107 ntBASIC0.99□□□□□ -2.25
DDX56Q9NY93 AL359881.1-201ENST00000602916 267 ntBASIC0.99□□□□□ -2.25
DDX56Q9NY93 RNU6-403P-201ENST00000363163 104 ntBASIC0.98□□□□□ -2.25
DDX56Q9NY93 SNORD58C-201ENST00000365223 64 ntBASIC0.98□□□□□ -2.25
DDX56Q9NY93 MIR605-201ENST00000385078 83 ntBASIC0.98□□□□□ -2.25
DDX56Q9NY93 RNU7-102P-201ENST00000458948 62 ntBASIC0.98□□□□□ -2.25
DDX56Q9NY93 RNU7-137P-201ENST00000516788 62 ntBASIC0.98□□□□□ -2.25
DDX56Q9NY93 RNU7-6P-201ENST00000516845 62 ntBASIC0.98□□□□□ -2.25
DDX56Q9NY93 RNU6-1234P-201ENST00000516877 103 ntBASIC0.98□□□□□ -2.25
DDX56Q9NY93 MIR4491-201ENST00000581087 68 ntBASIC0.98□□□□□ -2.25
DDX56Q9NY93 AC008608.1-201ENST00000603910 127 ntBASIC0.98□□□□□ -2.25
DDX56Q9NY93 Y_RNA.198-201ENST00000364013 98 ntBASIC0.97□□□□□ -2.25
DDX56Q9NY93 RNU6-53P-201ENST00000365367 106 ntBASIC0.97□□□□□ -2.25
DDX56Q9NY93 RNU4-45P-201ENST00000365469 141 ntBASIC0.97□□□□□ -2.25
DDX56Q9NY93 MIR573-201ENST00000384964 99 ntBASIC0.97□□□□□ -2.25
DDX56Q9NY93 Y_RNA.588-201ENST00000391254 102 ntBASIC0.97□□□□□ -2.25
DDX56Q9NY93 RNU7-107P-201ENST00000459121 61 ntBASIC0.97□□□□□ -2.25
DDX56Q9NY93 SNORD92-201ENST00000585078 85 ntBASIC0.97□□□□□ -2.25
DDX56Q9NY93 AC025166.1-201ENST00000612411 163 ntBASIC0.97□□□□□ -2.25
DDX56Q9NY93 AC105081.1-201ENST00000617727 106 ntBASIC0.97□□□□□ -2.25
DDX56Q9NY93 Y_RNA.218-201ENST00000364218 104 ntBASIC0.96□□□□□ -2.26
DDX56Q9NY93 Y_RNA.525-201ENST00000384570 113 ntBASIC0.96□□□□□ -2.26
DDX56Q9NY93 SNORD77B-201ENST00000391112 67 ntBASIC0.96□□□□□ -2.26
DDX56Q9NY93 Y_RNA.630-201ENST00000411370 108 ntBASIC0.96□□□□□ -2.26
DDX56Q9NY93 AC244098.3-201ENST00000424803 96 ntBASIC0.96□□□□□ -2.26
DDX56Q9NY93 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.96□□□□□ -2.26
DDX56Q9NY93 MIRLET7F2-201ENST00000385277 83 ntBASIC0.95□□□□□ -2.26
DDX56Q9NY93 MIR759-201ENST00000390224 91 ntBASIC0.95□□□□□ -2.26
DDX56Q9NY93 COX6CP6-201ENST00000490840 228 ntBASIC0.95□□□□□ -2.26
DDX56Q9NY93 RNU6-772P-201ENST00000516042 105 ntBASIC0.95□□□□□ -2.26
DDX56Q9NY93 FAM71BP1-201ENST00000604431 523 ntBASIC0.95□□□□□ -2.26
DDX56Q9NY93 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.95□□□□□ -2.26
DDX56Q9NY93 MIR8066-201ENST00000617280 78 ntBASIC0.95□□□□□ -2.26
DDX56Q9NY93 Y_RNA.13-201ENST00000362403 112 ntBASIC0.94□□□□□ -2.26
DDX56Q9NY93 Y_RNA.71-201ENST00000362892 104 ntBASIC0.94□□□□□ -2.26
DDX56Q9NY93 SNORD114-10-201ENST00000363409 72 ntBASIC0.94□□□□□ -2.26
DDX56Q9NY93 Y_RNA.213-201ENST00000364178 111 ntBASIC0.94□□□□□ -2.26
DDX56Q9NY93 RNU6-80P-201ENST00000384195 107 ntBASIC0.94□□□□□ -2.26
DDX56Q9NY93 RNU6-616P-201ENST00000384353 107 ntBASIC0.94□□□□□ -2.26
DDX56Q9NY93 RNU6-735P-201ENST00000410612 107 ntBASIC0.94□□□□□ -2.26
DDX56Q9NY93 RNA5SP222-201ENST00000411039 105 ntBASIC0.94□□□□□ -2.26
DDX56Q9NY93 MIR3163-201ENST00000581592 73 ntBASIC0.94□□□□□ -2.26
DDX56Q9NY93 AC087741.2-201ENST00000619415 172 ntBASIC0.94□□□□□ -2.26
DDX56Q9NY93 MTND5P18-201ENST00000445624 1801 ntBASIC0.94□□□□□ -2.26
DDX56Q9NY93 SNORA72.6-201ENST00000384520 129 ntBASIC0.93□□□□□ -2.26
DDX56Q9NY93 MIR532-201ENST00000385025 91 ntBASIC0.93□□□□□ -2.26
DDX56Q9NY93 AL603908.1-201ENST00000406098 201 ntBASIC0.93□□□□□ -2.26
DDX56Q9NY93 SNORA25.16-201ENST00000516741 121 ntBASIC0.93□□□□□ -2.26
DDX56Q9NY93 AL157777.2-201ENST00000258070 137 ntBASIC0.92□□□□□ -2.26
DDX56Q9NY93 SNORA25.9-201ENST00000365087 128 ntBASIC0.92□□□□□ -2.26
DDX56Q9NY93 MIR206-201ENST00000384872 86 ntBASIC0.92□□□□□ -2.26
DDX56Q9NY93 TMSB4XP3-201ENST00000445144 114 ntBASIC0.92□□□□□ -2.26
DDX56Q9NY93 MIR6082-201ENST00000613604 109 ntBASIC0.92□□□□□ -2.26
DDX56Q9NY93 MIR8070-201ENST00000616510 88 ntBASIC0.92□□□□□ -2.26
DDX56Q9NY93 HSBP1P2-201ENST00000299671 229 ntBASIC0.91□□□□□ -2.26
DDX56Q9NY93 Y_RNA.42-201ENST00000362660 108 ntBASIC0.91□□□□□ -2.26
DDX56Q9NY93 RNA5SP133-201ENST00000363368 119 ntBASIC0.91□□□□□ -2.26
DDX56Q9NY93 AC133485.1-201ENST00000567176 124 ntBASIC0.91□□□□□ -2.26
DDX56Q9NY93 AC090897.1-201ENST00000580909 226 ntBASIC0.91□□□□□ -2.26
DDX56Q9NY93 U6.109-201ENST00000636749 87 ntBASIC0.91□□□□□ -2.26
DDX56Q9NY93 SNORD114-27-201ENST00000363766 70 ntBASIC0.9□□□□□ -2.27
DDX56Q9NY93 RNU6-1321P-201ENST00000390905 107 ntBASIC0.9□□□□□ -2.27
DDX56Q9NY93 AC138749.4-201ENST00000563970 127 ntBASIC0.9□□□□□ -2.27
DDX56Q9NY93 Y_RNA.773-201ENST00000607168 90 ntBASIC0.9□□□□□ -2.27
DDX56Q9NY93 MIR6857-201ENST00000613267 93 ntBASIC0.9□□□□□ -2.27
DDX56Q9NY93 SNORD114-2-201ENST00000363953 78 ntBASIC0.89□□□□□ -2.27
DDX56Q9NY93 Y_RNA.346-201ENST00000365385 112 ntBASIC0.89□□□□□ -2.27
DDX56Q9NY93 RNU6-959P-201ENST00000384671 107 ntBASIC0.89□□□□□ -2.27
DDX56Q9NY93 MIR499A-201ENST00000384903 122 ntBASIC0.89□□□□□ -2.27
DDX56Q9NY93 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
DDX56Q9NY93 RNU7-2P-201ENST00000516096 62 ntBASIC0.89□□□□□ -2.27
DDX56Q9NY93 RNU6-659P-201ENST00000516454 104 ntBASIC0.89□□□□□ -2.27
DDX56Q9NY93 RNU6-531P-201ENST00000516694 104 ntBASIC0.89□□□□□ -2.27
DDX56Q9NY93 RNU6-448P-201ENST00000517052 107 ntBASIC0.89□□□□□ -2.27
DDX56Q9NY93 DEFB131E-201ENST00000532329 154 ntBASIC0.89□□□□□ -2.27
DDX56Q9NY93 MIR3612-201ENST00000579753 87 ntBASIC0.89□□□□□ -2.27
DDX56Q9NY93 RNU6-81P-201ENST00000365608 104 ntBASIC0.88□□□□□ -2.27
DDX56Q9NY93 SNORA36.2-201ENST00000384004 127 ntBASIC0.88□□□□□ -2.27
DDX56Q9NY93 Y_RNA.448-201ENST00000384185 108 ntBASIC0.88□□□□□ -2.27
DDX56Q9NY93 RNU6-1307P-201ENST00000391012 103 ntBASIC0.88□□□□□ -2.27
DDX56Q9NY93 RNA5SP102-201ENST00000516865 106 ntBASIC0.88□□□□□ -2.27
DDX56Q9NY93 AC013244.2-201ENST00000603396 103 ntBASIC0.88□□□□□ -2.27
DDX56Q9NY93 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.88□□□□□ -2.27
DDX56Q9NY93 SNORD115-19-201ENST00000363098 82 ntBASIC0.87□□□□□ -2.27
DDX56Q9NY93 SNORD115-18-201ENST00000363293 82 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 255.8 ms