Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
PDLIM7Q9NR12 MIR376B-201ENST00000614515 100 ntBASIC1.92□□□□□ -2.1
PDLIM7Q9NR12 AC105081.1-201ENST00000617727 106 ntBASIC1.92□□□□□ -2.1
PDLIM7Q9NR12 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.92□□□□□ -2.1
PDLIM7Q9NR12 RNA5SP48-201ENST00000363969 126 ntBASIC1.91□□□□□ -2.1
PDLIM7Q9NR12 Y_RNA.448-201ENST00000384185 108 ntBASIC1.91□□□□□ -2.1
PDLIM7Q9NR12 Y_RNA.467-201ENST00000384297 102 ntBASIC1.91□□□□□ -2.1
PDLIM7Q9NR12 MRPL35P3-201ENST00000421557 364 ntBASIC1.91□□□□□ -2.1
PDLIM7Q9NR12 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.91□□□□□ -2.1
PDLIM7Q9NR12 MIR4422-201ENST00000581938 83 ntBASIC1.91□□□□□ -2.1
PDLIM7Q9NR12 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
PDLIM7Q9NR12 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
PDLIM7Q9NR12 RNU4-52P-201ENST00000384209 138 ntBASIC1.9□□□□□ -2.11
PDLIM7Q9NR12 MIR34C-201ENST00000384831 77 ntBASIC1.9□□□□□ -2.11
PDLIM7Q9NR12 AC109327.2-201ENST00000448339 378 ntBASIC1.9□□□□□ -2.11
PDLIM7Q9NR12 RNU7-137P-201ENST00000516788 62 ntBASIC1.9□□□□□ -2.11
PDLIM7Q9NR12 RNU6-1006P-201ENST00000516998 103 ntBASIC1.9□□□□□ -2.11
PDLIM7Q9NR12 PRELID3BP2-201ENST00000605362 201 ntBASIC1.9□□□□□ -2.11
PDLIM7Q9NR12 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.89□□□□□ -2.11
PDLIM7Q9NR12 MIR7-2-201ENST00000384970 110 ntBASIC1.89□□□□□ -2.11
PDLIM7Q9NR12 RNU6-1321P-201ENST00000390905 107 ntBASIC1.89□□□□□ -2.11
PDLIM7Q9NR12 HSPE1P24-201ENST00000450782 238 ntBASIC1.89□□□□□ -2.11
PDLIM7Q9NR12 AL645939.4-201ENST00000604495 135 ntBASIC1.89□□□□□ -2.11
PDLIM7Q9NR12 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.89□□□□□ -2.11
PDLIM7Q9NR12 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.89□□□□□ -2.11
PDLIM7Q9NR12 SNORA25.3-201ENST00000363205 127 ntBASIC1.88□□□□□ -2.11
PDLIM7Q9NR12 SNORD114-10-201ENST00000363409 72 ntBASIC1.88□□□□□ -2.11
PDLIM7Q9NR12 RNU6-865P-201ENST00000364772 107 ntBASIC1.88□□□□□ -2.11
PDLIM7Q9NR12 RNY1P13-201ENST00000365030 105 ntBASIC1.88□□□□□ -2.11
PDLIM7Q9NR12 Y_RNA.540-201ENST00000384638 111 ntBASIC1.88□□□□□ -2.11
PDLIM7Q9NR12 RNA5SP237-201ENST00000410414 113 ntBASIC1.88□□□□□ -2.11
PDLIM7Q9NR12 AC244023.1-201ENST00000426884 112 ntBASIC1.88□□□□□ -2.11
PDLIM7Q9NR12 RPS29P28-201ENST00000446439 141 ntBASIC1.88□□□□□ -2.11
PDLIM7Q9NR12 RNU6-947P-201ENST00000516264 106 ntBASIC1.88□□□□□ -2.11
PDLIM7Q9NR12 Y_RNA.705-201ENST00000516862 110 ntBASIC1.88□□□□□ -2.11
PDLIM7Q9NR12 AL357312.1-201ENST00000603879 298 ntBASIC1.88□□□□□ -2.11
PDLIM7Q9NR12 AC242498.1-201ENST00000604134 111 ntBASIC1.88□□□□□ -2.11
PDLIM7Q9NR12 GHRLOS.1-201ENST00000610995 70 ntBASIC1.88□□□□□ -2.11
PDLIM7Q9NR12 Y_RNA.96-201ENST00000363092 109 ntBASIC1.87□□□□□ -2.11
PDLIM7Q9NR12 SNORD38.1-201ENST00000363863 68 ntBASIC1.87□□□□□ -2.11
PDLIM7Q9NR12 MIR450A2-201ENST00000385022 100 ntBASIC1.87□□□□□ -2.11
PDLIM7Q9NR12 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.87□□□□□ -2.11
PDLIM7Q9NR12 MIR1302-7-201ENST00000408841 72 ntBASIC1.87□□□□□ -2.11
PDLIM7Q9NR12 RN7SL274P-201ENST00000492268 272 ntBASIC1.87□□□□□ -2.11
PDLIM7Q9NR12 AC141846.1-201ENST00000568348 142 ntBASIC1.87□□□□□ -2.11
PDLIM7Q9NR12 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.86□□□□□ -2.11
PDLIM7Q9NR12 MIR494-201ENST00000349529 81 ntBASIC1.86□□□□□ -2.11
PDLIM7Q9NR12 Y_RNA.17-201ENST00000362433 111 ntBASIC1.86□□□□□ -2.11
PDLIM7Q9NR12 Y_RNA.190-201ENST00000363964 101 ntBASIC1.86□□□□□ -2.11
PDLIM7Q9NR12 RNU6-972P-201ENST00000391208 107 ntBASIC1.86□□□□□ -2.11
PDLIM7Q9NR12 RNU6-887P-201ENST00000410660 100 ntBASIC1.86□□□□□ -2.11
PDLIM7Q9NR12 RNU2-40P-201ENST00000410833 196 ntBASIC1.86□□□□□ -2.11
PDLIM7Q9NR12 AC027119.1-201ENST00000440877 241 ntBASIC1.86□□□□□ -2.11
PDLIM7Q9NR12 snoU13.25-201ENST00000458945 104 ntBASIC1.86□□□□□ -2.11
PDLIM7Q9NR12 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.86□□□□□ -2.11
PDLIM7Q9NR12 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.86□□□□□ -2.11
PDLIM7Q9NR12 RN7SKP12-201ENST00000516275 143 ntBASIC1.86□□□□□ -2.11
PDLIM7Q9NR12 MIR4439-201ENST00000583746 80 ntBASIC1.86□□□□□ -2.11
PDLIM7Q9NR12 AL662814.1-201ENST00000617364 121 ntBASIC1.86□□□□□ -2.11
PDLIM7Q9NR12 MIR8063-201ENST00000621930 81 ntBASIC1.86□□□□□ -2.11
PDLIM7Q9NR12 RNA5SP173-201ENST00000364857 136 ntBASIC1.85□□□□□ -2.11
PDLIM7Q9NR12 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.85□□□□□ -2.11
PDLIM7Q9NR12 Y_RNA.593-201ENST00000410292 98 ntBASIC1.85□□□□□ -2.11
PDLIM7Q9NR12 RNU6-86P-201ENST00000606534 107 ntBASIC1.85□□□□□ -2.11
PDLIM7Q9NR12 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.85□□□□□ -2.11
PDLIM7Q9NR12 uc_338.20-201ENST00000621563 178 ntBASIC1.85□□□□□ -2.11
PDLIM7Q9NR12 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
PDLIM7Q9NR12 RNU1-42P-201ENST00000364033 160 ntBASIC1.84□□□□□ -2.11
PDLIM7Q9NR12 RNU6-1163P-201ENST00000364516 107 ntBASIC1.84□□□□□ -2.11
PDLIM7Q9NR12 RNU6-820P-201ENST00000384273 107 ntBASIC1.84□□□□□ -2.11
PDLIM7Q9NR12 RNU6-1065P-201ENST00000384513 106 ntBASIC1.84□□□□□ -2.11
PDLIM7Q9NR12 RNU6-813P-201ENST00000384691 107 ntBASIC1.84□□□□□ -2.11
PDLIM7Q9NR12 MIR588-201ENST00000384900 83 ntBASIC1.84□□□□□ -2.11
PDLIM7Q9NR12 RNU1-78P-201ENST00000391248 165 ntBASIC1.84□□□□□ -2.11
PDLIM7Q9NR12 RNU6-447P-201ENST00000410293 104 ntBASIC1.84□□□□□ -2.11
PDLIM7Q9NR12 RNU6-1118P-201ENST00000410382 104 ntBASIC1.84□□□□□ -2.11
PDLIM7Q9NR12 RNU6-1076P-201ENST00000410397 104 ntBASIC1.84□□□□□ -2.11
PDLIM7Q9NR12 RNU6-355P-201ENST00000410427 104 ntBASIC1.84□□□□□ -2.11
PDLIM7Q9NR12 RNU6-791P-201ENST00000410467 104 ntBASIC1.84□□□□□ -2.11
PDLIM7Q9NR12 RNU6-705P-201ENST00000410601 104 ntBASIC1.84□□□□□ -2.11
PDLIM7Q9NR12 RNU6-1100P-201ENST00000410691 104 ntBASIC1.84□□□□□ -2.11
PDLIM7Q9NR12 RNU6-860P-201ENST00000410860 104 ntBASIC1.84□□□□□ -2.11
PDLIM7Q9NR12 RNU6-1217P-201ENST00000411276 104 ntBASIC1.84□□□□□ -2.11
PDLIM7Q9NR12 RNU6-785P-201ENST00000411324 104 ntBASIC1.84□□□□□ -2.11
PDLIM7Q9NR12 RNU7-48P-201ENST00000458875 63 ntBASIC1.84□□□□□ -2.11
PDLIM7Q9NR12 snoU13.2-201ENST00000459201 104 ntBASIC1.84□□□□□ -2.11
PDLIM7Q9NR12 AC005908.1-201ENST00000468701 347 ntBASIC1.84□□□□□ -2.11
PDLIM7Q9NR12 AC079140.2-201ENST00000506193 142 ntBASIC1.84□□□□□ -2.11
PDLIM7Q9NR12 SNORD53B-201ENST00000577887 78 ntBASIC1.84□□□□□ -2.11
PDLIM7Q9NR12 U6.90-201ENST00000614007 104 ntBASIC1.84□□□□□ -2.11
PDLIM7Q9NR12 SEPT14P17-201ENST00000617978 177 ntBASIC1.84□□□□□ -2.11
PDLIM7Q9NR12 U6.70-201ENST00000620287 104 ntBASIC1.84□□□□□ -2.11
PDLIM7Q9NR12 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
PDLIM7Q9NR12 Y_RNA.98-201ENST00000363109 102 ntBASIC1.83□□□□□ -2.12
PDLIM7Q9NR12 Y_RNA.191-201ENST00000363972 113 ntBASIC1.83□□□□□ -2.12
PDLIM7Q9NR12 RNU6-396P-201ENST00000365369 105 ntBASIC1.83□□□□□ -2.12
PDLIM7Q9NR12 RNA5SP364-201ENST00000516938 78 ntBASIC1.83□□□□□ -2.12
PDLIM7Q9NR12 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.83□□□□□ -2.12
PDLIM7Q9NR12 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.83□□□□□ -2.12
PDLIM7Q9NR12 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 165.3 ms