Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 MIR548G-201ENST00000408442 89 ntBASIC1.78□□□□□ -2.12
PCDH18Q9HCL0 HSPE1P24-201ENST00000450782 238 ntBASIC1.78□□□□□ -2.12
PCDH18Q9HCL0 RNU6-237P-201ENST00000515985 71 ntBASIC1.78□□□□□ -2.12
PCDH18Q9HCL0 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
PCDH18Q9HCL0 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
PCDH18Q9HCL0 RNA5SP48-201ENST00000363969 126 ntBASIC1.77□□□□□ -2.13
PCDH18Q9HCL0 RNU6-654P-201ENST00000364373 107 ntBASIC1.77□□□□□ -2.13
PCDH18Q9HCL0 SNORD58A-201ENST00000383875 65 ntBASIC1.77□□□□□ -2.13
PCDH18Q9HCL0 RNU6-997P-201ENST00000384725 107 ntBASIC1.77□□□□□ -2.13
PCDH18Q9HCL0 Y_RNA.567-201ENST00000384736 106 ntBASIC1.77□□□□□ -2.13
PCDH18Q9HCL0 RNU6-972P-201ENST00000391208 107 ntBASIC1.77□□□□□ -2.13
PCDH18Q9HCL0 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.77□□□□□ -2.13
PCDH18Q9HCL0 snoU13.26-201ENST00000459452 105 ntBASIC1.77□□□□□ -2.13
PCDH18Q9HCL0 RNU6-90P-201ENST00000606352 106 ntBASIC1.77□□□□□ -2.13
PCDH18Q9HCL0 AC012676.2-201ENST00000619258 186 ntBASIC1.77□□□□□ -2.13
PCDH18Q9HCL0 Y_RNA.98-201ENST00000363109 102 ntBASIC1.76□□□□□ -2.13
PCDH18Q9HCL0 Y_RNA.609-201ENST00000410669 89 ntBASIC1.76□□□□□ -2.13
PCDH18Q9HCL0 HMGN2P23-201ENST00000456759 269 ntBASIC1.76□□□□□ -2.13
PCDH18Q9HCL0 snoU13.2-201ENST00000459201 104 ntBASIC1.76□□□□□ -2.13
PCDH18Q9HCL0 RNU6-250P-201ENST00000516958 103 ntBASIC1.76□□□□□ -2.13
PCDH18Q9HCL0 AC133485.1-201ENST00000567176 124 ntBASIC1.76□□□□□ -2.13
PCDH18Q9HCL0 AC090897.1-201ENST00000580909 226 ntBASIC1.76□□□□□ -2.13
PCDH18Q9HCL0 GHRLOS.1-201ENST00000610995 70 ntBASIC1.76□□□□□ -2.13
PCDH18Q9HCL0 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.76□□□□□ -2.13
PCDH18Q9HCL0 WWP1P1-201ENST00000466609 2769 ntBASIC1.75□□□□□ -2.13
PCDH18Q9HCL0 SNORD116-22-201ENST00000384430 92 ntBASIC1.75□□□□□ -2.13
PCDH18Q9HCL0 MIR1261-201ENST00000408659 82 ntBASIC1.75□□□□□ -2.13
PCDH18Q9HCL0 RPL39P39-201ENST00000455840 151 ntBASIC1.75□□□□□ -2.13
PCDH18Q9HCL0 snoU13.15-201ENST00000459407 104 ntBASIC1.75□□□□□ -2.13
PCDH18Q9HCL0 MIR3124-201ENST00000582636 67 ntBASIC1.75□□□□□ -2.13
PCDH18Q9HCL0 AC103810.8-201ENST00000607347 118 ntBASIC1.75□□□□□ -2.13
PCDH18Q9HCL0 MIR8081-201ENST00000611533 95 ntBASIC1.75□□□□□ -2.13
PCDH18Q9HCL0 U6.109-201ENST00000636749 87 ntBASIC1.75□□□□□ -2.13
PCDH18Q9HCL0 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
PCDH18Q9HCL0 RNU6-396P-201ENST00000365369 105 ntBASIC1.74□□□□□ -2.13
PCDH18Q9HCL0 RNU6-1152P-201ENST00000384576 107 ntBASIC1.74□□□□□ -2.13
PCDH18Q9HCL0 MIR181B2-201ENST00000385004 89 ntBASIC1.74□□□□□ -2.13
PCDH18Q9HCL0 RNA5SP225-201ENST00000410874 135 ntBASIC1.74□□□□□ -2.13
PCDH18Q9HCL0 RNU6-295P-201ENST00000516901 104 ntBASIC1.74□□□□□ -2.13
PCDH18Q9HCL0 MIR4500-201ENST00000579472 76 ntBASIC1.74□□□□□ -2.13
PCDH18Q9HCL0 MIR4668-201ENST00000582284 70 ntBASIC1.74□□□□□ -2.13
PCDH18Q9HCL0 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
PCDH18Q9HCL0 MIR6516-201ENST00000630554 81 ntBASIC1.74□□□□□ -2.13
PCDH18Q9HCL0 MIR103A2-201ENST00000362154 78 ntBASIC1.73□□□□□ -2.13
PCDH18Q9HCL0 RNU6-1244P-201ENST00000363614 108 ntBASIC1.73□□□□□ -2.13
PCDH18Q9HCL0 SNORD1A-201ENST00000364968 72 ntBASIC1.73□□□□□ -2.13
PCDH18Q9HCL0 AC245517.4-201ENST00000448601 281 ntBASIC1.73□□□□□ -2.13
PCDH18Q9HCL0 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.73□□□□□ -2.13
PCDH18Q9HCL0 AP003327.1-201ENST00000529684 127 ntBASIC1.73□□□□□ -2.13
PCDH18Q9HCL0 AL357312.1-201ENST00000603879 298 ntBASIC1.73□□□□□ -2.13
PCDH18Q9HCL0 AC025521.1-201ENST00000621624 286 ntBASIC1.73□□□□□ -2.13
PCDH18Q9HCL0 AP001362.1-201ENST00000625165 124 ntBASIC1.73□□□□□ -2.13
PCDH18Q9HCL0 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
PCDH18Q9HCL0 RNU6-219P-201ENST00000364728 107 ntBASIC1.72□□□□□ -2.13
PCDH18Q9HCL0 RNU6-949P-201ENST00000384040 107 ntBASIC1.72□□□□□ -2.13
PCDH18Q9HCL0 RNU6-1124P-201ENST00000384169 107 ntBASIC1.72□□□□□ -2.13
PCDH18Q9HCL0 MIR1289-2-201ENST00000408360 111 ntBASIC1.72□□□□□ -2.13
PCDH18Q9HCL0 MIR1185-1-201ENST00000408598 86 ntBASIC1.72□□□□□ -2.13
PCDH18Q9HCL0 Y_RNA.611-201ENST00000410682 108 ntBASIC1.72□□□□□ -2.13
PCDH18Q9HCL0 BX276092.1-201ENST00000427368 251 ntBASIC1.72□□□□□ -2.13
PCDH18Q9HCL0 RNU7-62P-201ENST00000458856 62 ntBASIC1.72□□□□□ -2.13
PCDH18Q9HCL0 snoU13.9-201ENST00000458927 103 ntBASIC1.72□□□□□ -2.13
PCDH18Q9HCL0 AC023790.1-201ENST00000482174 347 ntBASIC1.72□□□□□ -2.13
PCDH18Q9HCL0 SNORA44.1-201ENST00000517031 108 ntBASIC1.72□□□□□ -2.13
PCDH18Q9HCL0 AC138749.4-201ENST00000563970 127 ntBASIC1.72□□□□□ -2.13
PCDH18Q9HCL0 MIR3937-201ENST00000580135 106 ntBASIC1.72□□□□□ -2.13
PCDH18Q9HCL0 RNU6-228P-201ENST00000362700 106 ntBASIC1.71□□□□□ -2.14
PCDH18Q9HCL0 Y_RNA.96-201ENST00000363092 109 ntBASIC1.71□□□□□ -2.14
PCDH18Q9HCL0 RNA5SP133-201ENST00000363368 119 ntBASIC1.71□□□□□ -2.14
PCDH18Q9HCL0 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.71□□□□□ -2.14
PCDH18Q9HCL0 RNU6-1165P-201ENST00000410119 107 ntBASIC1.71□□□□□ -2.14
PCDH18Q9HCL0 AC015818.7-201ENST00000428754 109 ntBASIC1.71□□□□□ -2.14
PCDH18Q9HCL0 AC087499.7-201ENST00000441958 109 ntBASIC1.71□□□□□ -2.14
PCDH18Q9HCL0 snoU13.21-201ENST00000459368 105 ntBASIC1.71□□□□□ -2.14
PCDH18Q9HCL0 MIR4255-201ENST00000579351 72 ntBASIC1.71□□□□□ -2.14
PCDH18Q9HCL0 MIR4439-201ENST00000583746 80 ntBASIC1.71□□□□□ -2.14
PCDH18Q9HCL0 AP000753.3-201ENST00000604083 169 ntBASIC1.71□□□□□ -2.14
PCDH18Q9HCL0 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
PCDH18Q9HCL0 MIR30D-201ENST00000362283 70 ntBASIC1.7□□□□□ -2.14
PCDH18Q9HCL0 SNORD116-10-201ENST00000363791 102 ntBASIC1.7□□□□□ -2.14
PCDH18Q9HCL0 SNORA2B-201ENST00000384583 137 ntBASIC1.7□□□□□ -2.14
PCDH18Q9HCL0 SNORD78.1-201ENST00000390866 65 ntBASIC1.7□□□□□ -2.14
PCDH18Q9HCL0 RNU6-447P-201ENST00000410293 104 ntBASIC1.7□□□□□ -2.14
PCDH18Q9HCL0 RNU6-1118P-201ENST00000410382 104 ntBASIC1.7□□□□□ -2.14
PCDH18Q9HCL0 RNU6-1076P-201ENST00000410397 104 ntBASIC1.7□□□□□ -2.14
PCDH18Q9HCL0 RNU6-355P-201ENST00000410427 104 ntBASIC1.7□□□□□ -2.14
PCDH18Q9HCL0 RNU6-791P-201ENST00000410467 104 ntBASIC1.7□□□□□ -2.14
PCDH18Q9HCL0 RNU6-705P-201ENST00000410601 104 ntBASIC1.7□□□□□ -2.14
PCDH18Q9HCL0 RNU6-1100P-201ENST00000410691 104 ntBASIC1.7□□□□□ -2.14
PCDH18Q9HCL0 RNU6-860P-201ENST00000410860 104 ntBASIC1.7□□□□□ -2.14
PCDH18Q9HCL0 RNU4-83P-201ENST00000410863 133 ntBASIC1.7□□□□□ -2.14
PCDH18Q9HCL0 RNU6-1217P-201ENST00000411276 104 ntBASIC1.7□□□□□ -2.14
PCDH18Q9HCL0 RNU6-785P-201ENST00000411324 104 ntBASIC1.7□□□□□ -2.14
PCDH18Q9HCL0 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.7□□□□□ -2.14
PCDH18Q9HCL0 AL513043.2-201ENST00000573941 143 ntBASIC1.7□□□□□ -2.14
PCDH18Q9HCL0 U6.90-201ENST00000614007 104 ntBASIC1.7□□□□□ -2.14
PCDH18Q9HCL0 U6.70-201ENST00000620287 104 ntBASIC1.7□□□□□ -2.14
PCDH18Q9HCL0 MIR7843-201ENST00000622274 79 ntBASIC1.7□□□□□ -2.14
PCDH18Q9HCL0 RNA5SP363-201ENST00000365072 115 ntBASIC1.69□□□□□ -2.14
PCDH18Q9HCL0 RNU6-1276P-201ENST00000365372 104 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms