Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 AC109327.2-201ENST00000448339 378 ntBASIC2.16□□□□□ -2.06
ZFYVE28Q9HCC9 RNU7-48P-201ENST00000458875 63 ntBASIC2.16□□□□□ -2.06
ZFYVE28Q9HCC9 RNU6-762P-201ENST00000517107 102 ntBASIC2.16□□□□□ -2.06
ZFYVE28Q9HCC9 AP000753.3-201ENST00000604083 169 ntBASIC2.16□□□□□ -2.06
ZFYVE28Q9HCC9 AL662814.1-201ENST00000617364 121 ntBASIC2.16□□□□□ -2.06
ZFYVE28Q9HCC9 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.16□□□□□ -2.06
ZFYVE28Q9HCC9 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
ZFYVE28Q9HCC9 Y_RNA.247-201ENST00000364500 92 ntBASIC2.15□□□□□ -2.07
ZFYVE28Q9HCC9 SNORD1A-201ENST00000364968 72 ntBASIC2.15□□□□□ -2.07
ZFYVE28Q9HCC9 Y_RNA.467-201ENST00000384297 102 ntBASIC2.15□□□□□ -2.07
ZFYVE28Q9HCC9 SNORD38.2-201ENST00000384470 69 ntBASIC2.15□□□□□ -2.07
ZFYVE28Q9HCC9 MIR588-201ENST00000384900 83 ntBASIC2.15□□□□□ -2.07
ZFYVE28Q9HCC9 MIR9-3-201ENST00000385084 90 ntBASIC2.15□□□□□ -2.07
ZFYVE28Q9HCC9 MIR1302-7-201ENST00000408841 72 ntBASIC2.15□□□□□ -2.07
ZFYVE28Q9HCC9 RNU6-887P-201ENST00000410660 100 ntBASIC2.15□□□□□ -2.07
ZFYVE28Q9HCC9 RNU2-40P-201ENST00000410833 196 ntBASIC2.15□□□□□ -2.07
ZFYVE28Q9HCC9 AC079140.2-201ENST00000506193 142 ntBASIC2.15□□□□□ -2.07
ZFYVE28Q9HCC9 MIR2115-201ENST00000516657 100 ntBASIC2.15□□□□□ -2.07
ZFYVE28Q9HCC9 RNU6-1006P-201ENST00000516998 103 ntBASIC2.15□□□□□ -2.07
ZFYVE28Q9HCC9 RNU4-52P-201ENST00000384209 138 ntBASIC2.14□□□□□ -2.07
ZFYVE28Q9HCC9 RNU6-813P-201ENST00000384691 107 ntBASIC2.14□□□□□ -2.07
ZFYVE28Q9HCC9 MIR450A2-201ENST00000385022 100 ntBASIC2.14□□□□□ -2.07
ZFYVE28Q9HCC9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
ZFYVE28Q9HCC9 RN7SL274P-201ENST00000492268 272 ntBASIC2.14□□□□□ -2.07
ZFYVE28Q9HCC9 AC133485.1-201ENST00000567176 124 ntBASIC2.14□□□□□ -2.07
ZFYVE28Q9HCC9 RNU6-90P-201ENST00000606352 106 ntBASIC2.14□□□□□ -2.07
ZFYVE28Q9HCC9 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
ZFYVE28Q9HCC9 RNA5SP37-201ENST00000365420 130 ntBASIC2.13□□□□□ -2.07
ZFYVE28Q9HCC9 AC005908.1-201ENST00000468701 347 ntBASIC2.13□□□□□ -2.07
ZFYVE28Q9HCC9 RNU11-2P-201ENST00000516898 142 ntBASIC2.13□□□□□ -2.07
ZFYVE28Q9HCC9 MIR4303-201ENST00000581299 66 ntBASIC2.13□□□□□ -2.07
ZFYVE28Q9HCC9 MIR4264-201ENST00000583520 66 ntBASIC2.13□□□□□ -2.07
ZFYVE28Q9HCC9 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.13□□□□□ -2.07
ZFYVE28Q9HCC9 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.13□□□□□ -2.07
ZFYVE28Q9HCC9 MIR302D-201ENST00000362275 68 ntBASIC2.12□□□□□ -2.07
ZFYVE28Q9HCC9 RNU6-949P-201ENST00000384040 107 ntBASIC2.12□□□□□ -2.07
ZFYVE28Q9HCC9 RNU6-820P-201ENST00000384273 107 ntBASIC2.12□□□□□ -2.07
ZFYVE28Q9HCC9 RNU6-1065P-201ENST00000384513 106 ntBASIC2.12□□□□□ -2.07
ZFYVE28Q9HCC9 MIR489-201ENST00000384923 84 ntBASIC2.12□□□□□ -2.07
ZFYVE28Q9HCC9 MIR502-201ENST00000606349 86 ntBASIC2.12□□□□□ -2.07
ZFYVE28Q9HCC9 RNU6-86P-201ENST00000606534 107 ntBASIC2.12□□□□□ -2.07
ZFYVE28Q9HCC9 AP001362.1-201ENST00000625165 124 ntBASIC2.12□□□□□ -2.07
ZFYVE28Q9HCC9 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
ZFYVE28Q9HCC9 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
ZFYVE28Q9HCC9 MT-TN-201ENST00000387400 73 ntBASIC2.11□□□□□ -2.07
ZFYVE28Q9HCC9 MIR548G-201ENST00000408442 89 ntBASIC2.11□□□□□ -2.07
ZFYVE28Q9HCC9 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.11□□□□□ -2.07
ZFYVE28Q9HCC9 SPINT5P-201ENST00000448174 155 ntBASIC2.11□□□□□ -2.07
ZFYVE28Q9HCC9 snoU13.25-201ENST00000458945 104 ntBASIC2.11□□□□□ -2.07
ZFYVE28Q9HCC9 RPL30P7-201ENST00000479312 323 ntBASIC2.11□□□□□ -2.07
ZFYVE28Q9HCC9 AC019176.1-201ENST00000518519 225 ntBASIC2.11□□□□□ -2.07
ZFYVE28Q9HCC9 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
ZFYVE28Q9HCC9 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
ZFYVE28Q9HCC9 RNU6-1163P-201ENST00000364516 107 ntBASIC2.1□□□□□ -2.07
ZFYVE28Q9HCC9 Y_RNA.388-201ENST00000383919 113 ntBASIC2.1□□□□□ -2.07
ZFYVE28Q9HCC9 AP003716.2-201ENST00000528260 108 ntBASIC2.1□□□□□ -2.07
ZFYVE28Q9HCC9 MTND5P40-201ENST00000559945 246 ntBASIC2.1□□□□□ -2.07
ZFYVE28Q9HCC9 MIR3937-201ENST00000580135 106 ntBASIC2.1□□□□□ -2.07
ZFYVE28Q9HCC9 BX248123.2-201ENST00000606318 124 ntBASIC2.1□□□□□ -2.07
ZFYVE28Q9HCC9 AL512598.1-201ENST00000610158 273 ntBASIC2.1□□□□□ -2.07
ZFYVE28Q9HCC9 AL161722.3-201ENST00000605789 2983 ntBASIC2.1□□□□□ -2.07
ZFYVE28Q9HCC9 MIR103A2-201ENST00000362154 78 ntBASIC2.09□□□□□ -2.07
ZFYVE28Q9HCC9 RNA5SP264-201ENST00000363115 107 ntBASIC2.09□□□□□ -2.07
ZFYVE28Q9HCC9 RNA5SP138-201ENST00000365098 114 ntBASIC2.09□□□□□ -2.07
ZFYVE28Q9HCC9 Y_RNA.567-201ENST00000384736 106 ntBASIC2.09□□□□□ -2.07
ZFYVE28Q9HCC9 MIR563-201ENST00000385080 79 ntBASIC2.09□□□□□ -2.07
ZFYVE28Q9HCC9 U8.15-201ENST00000390947 134 ntBASIC2.09□□□□□ -2.07
ZFYVE28Q9HCC9 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.09□□□□□ -2.07
ZFYVE28Q9HCC9 RNU6-717P-201ENST00000459076 104 ntBASIC2.09□□□□□ -2.07
ZFYVE28Q9HCC9 RPS29P11-201ENST00000496507 171 ntBASIC2.09□□□□□ -2.07
ZFYVE28Q9HCC9 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.09□□□□□ -2.07
ZFYVE28Q9HCC9 AC062037.1-201ENST00000605302 128 ntBASIC2.09□□□□□ -2.07
ZFYVE28Q9HCC9 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
ZFYVE28Q9HCC9 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
ZFYVE28Q9HCC9 Y_RNA.190-201ENST00000363964 101 ntBASIC2.08□□□□□ -2.08
ZFYVE28Q9HCC9 SNORD58A-201ENST00000383875 65 ntBASIC2.08□□□□□ -2.08
ZFYVE28Q9HCC9 RNU6-205P-201ENST00000390858 107 ntBASIC2.08□□□□□ -2.08
ZFYVE28Q9HCC9 HMGN2P19-201ENST00000425149 265 ntBASIC2.08□□□□□ -2.08
ZFYVE28Q9HCC9 snoU13.18-201ENST00000459483 104 ntBASIC2.08□□□□□ -2.08
ZFYVE28Q9HCC9 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.08□□□□□ -2.08
ZFYVE28Q9HCC9 MIR4255-201ENST00000579351 72 ntBASIC2.08□□□□□ -2.08
ZFYVE28Q9HCC9 SNORA4-201ENST00000584302 138 ntBASIC2.08□□□□□ -2.08
ZFYVE28Q9HCC9 MIR6740-201ENST00000618268 113 ntBASIC2.08□□□□□ -2.08
ZFYVE28Q9HCC9 MIR6516-201ENST00000630554 81 ntBASIC2.08□□□□□ -2.08
ZFYVE28Q9HCC9 AL359851.1-201ENST00000569460 4997 ntBASIC2.08□□□□□ -2.08
ZFYVE28Q9HCC9 Y_RNA.17-201ENST00000362433 111 ntBASIC2.07□□□□□ -2.08
ZFYVE28Q9HCC9 SNORD116-10-201ENST00000363791 102 ntBASIC2.07□□□□□ -2.08
ZFYVE28Q9HCC9 RNY1P2-201ENST00000364820 117 ntBASIC2.07□□□□□ -2.08
ZFYVE28Q9HCC9 RNU6-1165P-201ENST00000410119 107 ntBASIC2.07□□□□□ -2.08
ZFYVE28Q9HCC9 RNU7-62P-201ENST00000458856 62 ntBASIC2.07□□□□□ -2.08
ZFYVE28Q9HCC9 RNU7-95P-201ENST00000459222 64 ntBASIC2.07□□□□□ -2.08
ZFYVE28Q9HCC9 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.07□□□□□ -2.08
ZFYVE28Q9HCC9 RN7SKP12-201ENST00000516275 143 ntBASIC2.07□□□□□ -2.08
ZFYVE28Q9HCC9 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.07□□□□□ -2.08
ZFYVE28Q9HCC9 MIR3198-2-201ENST00000577868 80 ntBASIC2.07□□□□□ -2.08
ZFYVE28Q9HCC9 MIR3664-201ENST00000579074 99 ntBASIC2.07□□□□□ -2.08
ZFYVE28Q9HCC9 AC103810.7-201ENST00000607821 91 ntBASIC2.07□□□□□ -2.08
ZFYVE28Q9HCC9 AC012676.2-201ENST00000619258 186 ntBASIC2.07□□□□□ -2.08
ZFYVE28Q9HCC9 MIR1185-1-201ENST00000408598 86 ntBASIC2.06□□□□□ -2.08
ZFYVE28Q9HCC9 AC025033.1-201ENST00000463883 194 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms