Protein–RNA interactions for Protein: Q9H4I2

ZHX3, Zinc fingers and homeoboxes protein 3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZHX3Q9H4I2 RNU4-67P-201ENST00000364569 141 ntBASIC0.19□□□□□ -2.38
ZHX3Q9H4I2 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.19□□□□□ -2.38
ZHX3Q9H4I2 AL022718.1-201ENST00000412004 84 ntBASIC0.19□□□□□ -2.38
ZHX3Q9H4I2 RNU4-71P-201ENST00000516258 113 ntBASIC0.19□□□□□ -2.38
ZHX3Q9H4I2 RNU7-35P-201ENST00000517174 62 ntBASIC0.19□□□□□ -2.38
ZHX3Q9H4I2 AC069113.3-201ENST00000521019 150 ntBASIC0.19□□□□□ -2.38
ZHX3Q9H4I2 MIR7107-201ENST00000611489 80 ntBASIC0.19□□□□□ -2.38
ZHX3Q9H4I2 RNA5SP227-201ENST00000516184 113 ntBASIC0.18□□□□□ -2.38
ZHX3Q9H4I2 RNA5SP33-201ENST00000516687 98 ntBASIC0.18□□□□□ -2.38
ZHX3Q9H4I2 SCARNA16.5-201ENST00000517114 183 ntBASIC0.18□□□□□ -2.38
ZHX3Q9H4I2 AC112693.2-201ENST00000556538 232 ntBASIC0.18□□□□□ -2.38
ZHX3Q9H4I2 AC062037.2-201ENST00000610137 73 ntBASIC0.18□□□□□ -2.38
ZHX3Q9H4I2 AL109933.3-201ENST00000619095 188 ntBASIC0.18□□□□□ -2.38
ZHX3Q9H4I2 SNORA32-201ENST00000384072 121 ntBASIC0.17□□□□□ -2.38
ZHX3Q9H4I2 AC069271.1-201ENST00000445577 156 ntBASIC0.17□□□□□ -2.38
ZHX3Q9H4I2 RNU6-1194P-201ENST00000516208 104 ntBASIC0.17□□□□□ -2.38
ZHX3Q9H4I2 Y_RNA.680-201ENST00000516441 93 ntBASIC0.17□□□□□ -2.38
ZHX3Q9H4I2 RNU6-531P-201ENST00000516694 104 ntBASIC0.17□□□□□ -2.38
ZHX3Q9H4I2 RNA5SP47-201ENST00000517230 109 ntBASIC0.17□□□□□ -2.38
ZHX3Q9H4I2 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.17□□□□□ -2.38
ZHX3Q9H4I2 MIR6828-201ENST00000636181 60 ntBASIC0.17□□□□□ -2.38
ZHX3Q9H4I2 MIR4315-1-201ENST00000636800 73 ntBASIC0.17□□□□□ -2.38
ZHX3Q9H4I2 MIR4315-2-201ENST00000640925 73 ntBASIC0.17□□□□□ -2.38
ZHX3Q9H4I2 Y_RNA.60-201ENST00000362831 98 ntBASIC0.16□□□□□ -2.38
ZHX3Q9H4I2 RNA5SP133-201ENST00000363368 119 ntBASIC0.16□□□□□ -2.38
ZHX3Q9H4I2 SNORD28-201ENST00000384706 75 ntBASIC0.16□□□□□ -2.38
ZHX3Q9H4I2 RNA5SP63-201ENST00000391225 112 ntBASIC0.16□□□□□ -2.38
ZHX3Q9H4I2 AL118496.2-201ENST00000448300 230 ntBASIC0.16□□□□□ -2.38
ZHX3Q9H4I2 RNU6-768P-201ENST00000384683 107 ntBASIC0.15□□□□□ -2.39
ZHX3Q9H4I2 RNU6-918P-201ENST00000391219 106 ntBASIC0.15□□□□□ -2.39
ZHX3Q9H4I2 RNA5SP236-201ENST00000516169 116 ntBASIC0.15□□□□□ -2.39
ZHX3Q9H4I2 RNU6-111P-201ENST00000517179 105 ntBASIC0.15□□□□□ -2.39
ZHX3Q9H4I2 MIR4639-201ENST00000584938 69 ntBASIC0.15□□□□□ -2.39
ZHX3Q9H4I2 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.15□□□□□ -2.39
ZHX3Q9H4I2 RNU6-690P-201ENST00000365242 106 ntBASIC0.14□□□□□ -2.39
ZHX3Q9H4I2 RNU6-1023P-201ENST00000516137 106 ntBASIC0.14□□□□□ -2.39
ZHX3Q9H4I2 U6.109-201ENST00000636749 87 ntBASIC0.14□□□□□ -2.39
ZHX3Q9H4I2 AC091304.10-201ENST00000641554 121 ntBASIC0.14□□□□□ -2.39
ZHX3Q9H4I2 RNU4-58P-201ENST00000363192 141 ntBASIC0.13□□□□□ -2.39
ZHX3Q9H4I2 Y_RNA.120-201ENST00000363304 110 ntBASIC0.13□□□□□ -2.39
ZHX3Q9H4I2 RNU6-1082P-201ENST00000364574 107 ntBASIC0.13□□□□□ -2.39
ZHX3Q9H4I2 SNORA20.1-201ENST00000364790 130 ntBASIC0.13□□□□□ -2.39
ZHX3Q9H4I2 Y_RNA.476-201ENST00000384347 108 ntBASIC0.13□□□□□ -2.39
ZHX3Q9H4I2 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
ZHX3Q9H4I2 MIR6755-201ENST00000619993 66 ntBASIC0.13□□□□□ -2.39
ZHX3Q9H4I2 AC244669.1-204ENST00000621564 178 ntBASIC0.13□□□□□ -2.39
ZHX3Q9H4I2 SNORD115-2-201ENST00000362842 82 ntBASIC0.12□□□□□ -2.39
ZHX3Q9H4I2 SNORD115-20-201ENST00000365099 82 ntBASIC0.12□□□□□ -2.39
ZHX3Q9H4I2 Y_RNA.423-201ENST00000384057 113 ntBASIC0.12□□□□□ -2.39
ZHX3Q9H4I2 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
ZHX3Q9H4I2 MIR3149-201ENST00000584629 83 ntBASIC0.12□□□□□ -2.39
ZHX3Q9H4I2 MIR6718-201ENST00000616153 80 ntBASIC0.12□□□□□ -2.39
ZHX3Q9H4I2 RNA5SP245-201ENST00000364239 121 ntBASIC0.11□□□□□ -2.39
ZHX3Q9H4I2 Y_RNA.366-201ENST00000365540 102 ntBASIC0.11□□□□□ -2.39
ZHX3Q9H4I2 MIRLET7F2-201ENST00000385277 83 ntBASIC0.11□□□□□ -2.39
ZHX3Q9H4I2 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
ZHX3Q9H4I2 AC107027.2-201ENST00000512197 115 ntBASIC0.11□□□□□ -2.39
ZHX3Q9H4I2 RNU6-1045P-201ENST00000516321 107 ntBASIC0.11□□□□□ -2.39
ZHX3Q9H4I2 MIR548AE2-201ENST00000583456 67 ntBASIC0.11□□□□□ -2.39
ZHX3Q9H4I2 U4.1-201ENST00000620349 87 ntBASIC0.11□□□□□ -2.39
ZHX3Q9H4I2 MIR101-2-201ENST00000362195 79 ntBASIC0.1□□□□□ -2.39
ZHX3Q9H4I2 MIR411-201ENST00000362239 96 ntBASIC0.1□□□□□ -2.39
ZHX3Q9H4I2 SNORA63.5-201ENST00000363548 123 ntBASIC0.1□□□□□ -2.39
ZHX3Q9H4I2 Y_RNA.162-201ENST00000363683 102 ntBASIC0.1□□□□□ -2.39
ZHX3Q9H4I2 RNU6-818P-201ENST00000364837 108 ntBASIC0.1□□□□□ -2.39
ZHX3Q9H4I2 Y_RNA.435-201ENST00000384095 112 ntBASIC0.1□□□□□ -2.39
ZHX3Q9H4I2 RNU6-187P-201ENST00000384139 106 ntBASIC0.1□□□□□ -2.39
ZHX3Q9H4I2 Y_RNA.447-201ENST00000384184 113 ntBASIC0.1□□□□□ -2.39
ZHX3Q9H4I2 MIR1270-201ENST00000459320 83 ntBASIC0.1□□□□□ -2.39
ZHX3Q9H4I2 SCARNA15.1-201ENST00000516384 125 ntBASIC0.1□□□□□ -2.39
ZHX3Q9H4I2 SNORD67.1-201ENST00000516618 108 ntBASIC0.1□□□□□ -2.39
ZHX3Q9H4I2 MIR4305-201ENST00000583252 102 ntBASIC0.1□□□□□ -2.39
ZHX3Q9H4I2 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.1□□□□□ -2.39
ZHX3Q9H4I2 TUG1_4.1-201ENST00000619464 181 ntBASIC0.1□□□□□ -2.39
ZHX3Q9H4I2 SNORA9.1-201ENST00000362412 131 ntBASIC0.09□□□□□ -2.4
ZHX3Q9H4I2 Y_RNA.200-201ENST00000364018 102 ntBASIC0.09□□□□□ -2.4
ZHX3Q9H4I2 RNU6-47P-201ENST00000383866 107 ntBASIC0.09□□□□□ -2.4
ZHX3Q9H4I2 Y_RNA.531-201ENST00000384589 121 ntBASIC0.09□□□□□ -2.4
ZHX3Q9H4I2 RNU7-137P-201ENST00000516788 62 ntBASIC0.09□□□□□ -2.4
ZHX3Q9H4I2 AC138749.4-201ENST00000563970 127 ntBASIC0.09□□□□□ -2.4
ZHX3Q9H4I2 RNU1-29P-201ENST00000606574 126 ntBASIC0.09□□□□□ -2.4
ZHX3Q9H4I2 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.08□□□□□ -2.4
ZHX3Q9H4I2 Y_RNA.83-201ENST00000363005 113 ntBASIC0.08□□□□□ -2.4
ZHX3Q9H4I2 RNU6-1020P-201ENST00000363684 107 ntBASIC0.08□□□□□ -2.4
ZHX3Q9H4I2 Y_RNA.307-201ENST00000365022 117 ntBASIC0.08□□□□□ -2.4
ZHX3Q9H4I2 RNU6-240P-201ENST00000516098 97 ntBASIC0.08□□□□□ -2.4
ZHX3Q9H4I2 RNU2-35P-201ENST00000516446 142 ntBASIC0.08□□□□□ -2.4
ZHX3Q9H4I2 RNU2-60P-201ENST00000517290 128 ntBASIC0.08□□□□□ -2.4
ZHX3Q9H4I2 AL359881.1-201ENST00000602916 267 ntBASIC0.08□□□□□ -2.4
ZHX3Q9H4I2 RNA5SP257-201ENST00000363023 116 ntBASIC0.07□□□□□ -2.4
ZHX3Q9H4I2 SNORA42.1-201ENST00000363515 137 ntBASIC0.07□□□□□ -2.4
ZHX3Q9H4I2 RNU6-702P-201ENST00000364982 107 ntBASIC0.07□□□□□ -2.4
ZHX3Q9H4I2 Y_RNA.337-201ENST00000365312 102 ntBASIC0.07□□□□□ -2.4
ZHX3Q9H4I2 RNU6-1126P-201ENST00000384002 107 ntBASIC0.07□□□□□ -2.4
ZHX3Q9H4I2 PCNPP3-201ENST00000393579 471 ntBASIC0.07□□□□□ -2.4
ZHX3Q9H4I2 AC011603.4-201ENST00000611325 277 ntBASIC0.07□□□□□ -2.4
ZHX3Q9H4I2 MIR2909-201ENST00000617113 69 ntBASIC0.07□□□□□ -2.4
ZHX3Q9H4I2 Y_RNA.119-201ENST00000363301 96 ntBASIC0.06□□□□□ -2.4
ZHX3Q9H4I2 RNY1P11-201ENST00000363759 113 ntBASIC0.06□□□□□ -2.4
ZHX3Q9H4I2 RNU6-312P-201ENST00000364629 107 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 214 ms