Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 RNU6-690P-201ENST00000365242 106 ntBASIC0.34□□□□□ -2.36
SNX25Q9H3E2 SNORA8.2-201ENST00000384372 139 ntBASIC0.34□□□□□ -2.36
SNX25Q9H3E2 RNU6-588P-201ENST00000410281 105 ntBASIC0.34□□□□□ -2.36
SNX25Q9H3E2 SNORD71-201ENST00000411292 86 ntBASIC0.34□□□□□ -2.36
SNX25Q9H3E2 Y_RNA.644-201ENST00000459006 113 ntBASIC0.34□□□□□ -2.36
SNX25Q9H3E2 Y_RNA.674-201ENST00000516362 113 ntBASIC0.34□□□□□ -2.36
SNX25Q9H3E2 SNORA31.14-201ENST00000516728 116 ntBASIC0.34□□□□□ -2.36
SNX25Q9H3E2 AC072026.1-201ENST00000605023 201 ntBASIC0.34□□□□□ -2.36
SNX25Q9H3E2 AC141273.2-201ENST00000618989 130 ntBASIC0.34□□□□□ -2.36
SNX25Q9H3E2 MIR6844-201ENST00000637122 62 ntBASIC0.34□□□□□ -2.36
SNX25Q9H3E2 MIR103A1-201ENST00000362165 78 ntBASIC0.33□□□□□ -2.36
SNX25Q9H3E2 RNU6-379P-201ENST00000363813 104 ntBASIC0.33□□□□□ -2.36
SNX25Q9H3E2 Y_RNA.297-201ENST00000364950 91 ntBASIC0.33□□□□□ -2.36
SNX25Q9H3E2 SNORA32-201ENST00000384072 121 ntBASIC0.33□□□□□ -2.36
SNX25Q9H3E2 RNY1P4-201ENST00000384595 115 ntBASIC0.33□□□□□ -2.36
SNX25Q9H3E2 RNU6-239P-201ENST00000390990 99 ntBASIC0.33□□□□□ -2.36
SNX25Q9H3E2 Y_RNA.793-201ENST00000411222 111 ntBASIC0.33□□□□□ -2.36
SNX25Q9H3E2 RNU2-35P-201ENST00000516446 142 ntBASIC0.33□□□□□ -2.36
SNX25Q9H3E2 RNA5SP33-201ENST00000516687 98 ntBASIC0.33□□□□□ -2.36
SNX25Q9H3E2 MTND5P34-201ENST00000568888 325 ntBASIC0.33□□□□□ -2.36
SNX25Q9H3E2 MIR3646-201ENST00000578301 84 ntBASIC0.33□□□□□ -2.36
SNX25Q9H3E2 AC011603.4-201ENST00000611325 277 ntBASIC0.33□□□□□ -2.36
SNX25Q9H3E2 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.33□□□□□ -2.36
SNX25Q9H3E2 AC090625.1-201ENST00000357130 210 ntBASIC0.32□□□□□ -2.36
SNX25Q9H3E2 RNU4-84P-201ENST00000364200 139 ntBASIC0.32□□□□□ -2.36
SNX25Q9H3E2 Y_RNA.357-201ENST00000365487 109 ntBASIC0.32□□□□□ -2.36
SNX25Q9H3E2 Y_RNA.536-201ENST00000384621 113 ntBASIC0.32□□□□□ -2.36
SNX25Q9H3E2 RNU6-291P-201ENST00000384720 107 ntBASIC0.32□□□□□ -2.36
SNX25Q9H3E2 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
SNX25Q9H3E2 AC108740.1-201ENST00000498629 225 ntBASIC0.32□□□□□ -2.36
SNX25Q9H3E2 MIR4305-201ENST00000583252 102 ntBASIC0.32□□□□□ -2.36
SNX25Q9H3E2 AC078938.1-201ENST00000620993 318 ntBASIC0.32□□□□□ -2.36
SNX25Q9H3E2 Y_RNA.174-201ENST00000363781 105 ntBASIC0.31□□□□□ -2.36
SNX25Q9H3E2 Y_RNA.188-201ENST00000363952 111 ntBASIC0.31□□□□□ -2.36
SNX25Q9H3E2 Y_RNA.531-201ENST00000384589 121 ntBASIC0.31□□□□□ -2.36
SNX25Q9H3E2 AL078595.1-201ENST00000404458 226 ntBASIC0.31□□□□□ -2.36
SNX25Q9H3E2 RNU6-240P-201ENST00000516098 97 ntBASIC0.31□□□□□ -2.36
SNX25Q9H3E2 Y_RNA.697-201ENST00000516776 113 ntBASIC0.31□□□□□ -2.36
SNX25Q9H3E2 AC022523.2-201ENST00000561045 150 ntBASIC0.31□□□□□ -2.36
SNX25Q9H3E2 MIR3658-201ENST00000636291 56 ntBASIC0.31□□□□□ -2.36
SNX25Q9H3E2 AC010487.4-201ENST00000637027 61 ntBASIC0.31□□□□□ -2.36
SNX25Q9H3E2 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
SNX25Q9H3E2 RNU6-508P-201ENST00000363231 103 ntBASIC0.3□□□□□ -2.36
SNX25Q9H3E2 Y_RNA.240-201ENST00000364469 95 ntBASIC0.3□□□□□ -2.36
SNX25Q9H3E2 Y_RNA.366-201ENST00000365540 102 ntBASIC0.3□□□□□ -2.36
SNX25Q9H3E2 RNU6-535P-201ENST00000384722 107 ntBASIC0.3□□□□□ -2.36
SNX25Q9H3E2 MT-TG-201ENST00000387429 68 ntBASIC0.3□□□□□ -2.36
SNX25Q9H3E2 SNRPGP12-201ENST00000449481 213 ntBASIC0.3□□□□□ -2.36
SNX25Q9H3E2 MIR1270-201ENST00000459320 83 ntBASIC0.3□□□□□ -2.36
SNX25Q9H3E2 RNU6-1271P-201ENST00000517049 105 ntBASIC0.3□□□□□ -2.36
SNX25Q9H3E2 DEFB131E-201ENST00000532329 154 ntBASIC0.3□□□□□ -2.36
SNX25Q9H3E2 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.3□□□□□ -2.36
SNX25Q9H3E2 MIR548AE2-201ENST00000583456 67 ntBASIC0.3□□□□□ -2.36
SNX25Q9H3E2 RNU6-1327P-201ENST00000365302 105 ntBASIC0.29□□□□□ -2.36
SNX25Q9H3E2 MTATP6P21-201ENST00000440681 189 ntBASIC0.29□□□□□ -2.36
SNX25Q9H3E2 Y_RNA.651-201ENST00000459380 103 ntBASIC0.29□□□□□ -2.36
SNX25Q9H3E2 RNA5SP134-201ENST00000516492 96 ntBASIC0.29□□□□□ -2.36
SNX25Q9H3E2 RNU6-531P-201ENST00000516694 104 ntBASIC0.29□□□□□ -2.36
SNX25Q9H3E2 AP002392.1-201ENST00000537692 208 ntBASIC0.29□□□□□ -2.36
SNX25Q9H3E2 AC138907.4-201ENST00000570107 226 ntBASIC0.29□□□□□ -2.36
SNX25Q9H3E2 AL359881.1-201ENST00000602916 267 ntBASIC0.29□□□□□ -2.36
SNX25Q9H3E2 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.29□□□□□ -2.36
SNX25Q9H3E2 MIR6828-201ENST00000636181 60 ntBASIC0.29□□□□□ -2.36
SNX25Q9H3E2 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.29□□□□□ -2.36
SNX25Q9H3E2 Y_RNA.36-201ENST00000362602 112 ntBASIC0.28□□□□□ -2.36
SNX25Q9H3E2 RNA5SP133-201ENST00000363368 119 ntBASIC0.28□□□□□ -2.36
SNX25Q9H3E2 RNU6-1318P-201ENST00000365389 103 ntBASIC0.28□□□□□ -2.36
SNX25Q9H3E2 SNORD37.2-201ENST00000391075 66 ntBASIC0.28□□□□□ -2.36
SNX25Q9H3E2 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.28□□□□□ -2.36
SNX25Q9H3E2 RNU7-137P-201ENST00000516788 62 ntBASIC0.28□□□□□ -2.36
SNX25Q9H3E2 U6.109-201ENST00000636749 87 ntBASIC0.28□□□□□ -2.36
SNX25Q9H3E2 RNA5SP245-201ENST00000364239 121 ntBASIC0.27□□□□□ -2.37
SNX25Q9H3E2 Y_RNA.251-201ENST00000364551 99 ntBASIC0.27□□□□□ -2.37
SNX25Q9H3E2 RNU6-200P-201ENST00000364743 107 ntBASIC0.27□□□□□ -2.37
SNX25Q9H3E2 Y_RNA.401-201ENST00000383965 117 ntBASIC0.27□□□□□ -2.37
SNX25Q9H3E2 Y_RNA.441-201ENST00000384123 112 ntBASIC0.27□□□□□ -2.37
SNX25Q9H3E2 SUMO1P3-201ENST00000439961 304 ntBASIC0.27□□□□□ -2.37
SNX25Q9H3E2 RNU7-120P-201ENST00000459334 63 ntBASIC0.27□□□□□ -2.37
SNX25Q9H3E2 RNU6-1194P-201ENST00000516208 104 ntBASIC0.27□□□□□ -2.37
SNX25Q9H3E2 SNORD67.1-201ENST00000516618 108 ntBASIC0.27□□□□□ -2.37
SNX25Q9H3E2 RNA5SP268-201ENST00000516828 124 ntBASIC0.27□□□□□ -2.37
SNX25Q9H3E2 RNU6-388P-201ENST00000517012 105 ntBASIC0.27□□□□□ -2.37
SNX25Q9H3E2 RNU6-389P-201ENST00000517048 105 ntBASIC0.27□□□□□ -2.37
SNX25Q9H3E2 RNA5SP47-201ENST00000517230 109 ntBASIC0.27□□□□□ -2.37
SNX25Q9H3E2 AC138749.4-201ENST00000563970 127 ntBASIC0.27□□□□□ -2.37
SNX25Q9H3E2 DNAJC19P2-201ENST00000593340 302 ntBASIC0.27□□□□□ -2.37
SNX25Q9H3E2 AC021443.1-201ENST00000604478 211 ntBASIC0.27□□□□□ -2.37
SNX25Q9H3E2 RNU6-682P-201ENST00000363843 106 ntBASIC0.26□□□□□ -2.37
SNX25Q9H3E2 RNU6-309P-201ENST00000364573 106 ntBASIC0.26□□□□□ -2.37
SNX25Q9H3E2 SNORD28-201ENST00000384706 75 ntBASIC0.26□□□□□ -2.37
SNX25Q9H3E2 RNU6-138P-201ENST00000515952 107 ntBASIC0.26□□□□□ -2.37
SNX25Q9H3E2 RNU6-861P-201ENST00000516745 106 ntBASIC0.26□□□□□ -2.37
SNX25Q9H3E2 RNU4-58P-201ENST00000363192 141 ntBASIC0.25□□□□□ -2.37
SNX25Q9H3E2 RNA5SP62-201ENST00000363457 110 ntBASIC0.25□□□□□ -2.37
SNX25Q9H3E2 RNU6-1229P-201ENST00000364295 107 ntBASIC0.25□□□□□ -2.37
SNX25Q9H3E2 Y_RNA.540-201ENST00000384638 111 ntBASIC0.25□□□□□ -2.37
SNX25Q9H3E2 Y_RNA.552-201ENST00000384665 112 ntBASIC0.25□□□□□ -2.37
SNX25Q9H3E2 RNU7-164P-201ENST00000459221 62 ntBASIC0.25□□□□□ -2.37
SNX25Q9H3E2 RNU7-123P-201ENST00000515911 60 ntBASIC0.25□□□□□ -2.37
SNX25Q9H3E2 RNU6-863P-201ENST00000515989 104 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 180.1 ms