Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.55□□□□□ -2.5
ALX4Q9H161 MIR3920-201ENST00000581751 86 ntBASIC-0.55□□□□□ -2.5
ALX4Q9H161 MIR4280-201ENST00000582178 76 ntBASIC-0.55□□□□□ -2.5
ALX4Q9H161 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-0.55□□□□□ -2.5
ALX4Q9H161 U6.109-201ENST00000636749 87 ntBASIC-0.55□□□□□ -2.5
ALX4Q9H161 RNU1-141P-201ENST00000364623 158 ntBASIC-0.56□□□□□ -2.5
ALX4Q9H161 RNA5SP331-201ENST00000364986 107 ntBASIC-0.56□□□□□ -2.5
ALX4Q9H161 MIR539-201ENST00000365690 78 ntBASIC-0.56□□□□□ -2.5
ALX4Q9H161 RNU6-47P-201ENST00000383866 107 ntBASIC-0.56□□□□□ -2.5
ALX4Q9H161 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.56□□□□□ -2.5
ALX4Q9H161 MIR181B2-201ENST00000385004 89 ntBASIC-0.56□□□□□ -2.5
ALX4Q9H161 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.56□□□□□ -2.5
ALX4Q9H161 RNU6-138P-201ENST00000515952 107 ntBASIC-0.56□□□□□ -2.5
ALX4Q9H161 IGKV1-22-201ENST00000524313 326 ntBASIC-0.56□□□□□ -2.5
ALX4Q9H161 MIR548AE1-201ENST00000583292 70 ntBASIC-0.56□□□□□ -2.5
ALX4Q9H161 MIR4473-201ENST00000583731 91 ntBASIC-0.56□□□□□ -2.5
ALX4Q9H161 AC090574.1-201ENST00000623186 233 ntBASIC-0.56□□□□□ -2.5
ALX4Q9H161 AC093726.3-201ENST00000637588 150 ntBASIC-0.56□□□□□ -2.5
ALX4Q9H161 RNU6-509P-201ENST00000363519 107 ntBASIC-0.57□□□□□ -2.5
ALX4Q9H161 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.57□□□□□ -2.5
ALX4Q9H161 AL603914.1-201ENST00000401964 204 ntBASIC-0.57□□□□□ -2.5
ALX4Q9H161 Y_RNA.632-201ENST00000459189 102 ntBASIC-0.57□□□□□ -2.5
ALX4Q9H161 SNORD19B-201ENST00000459623 84 ntBASIC-0.57□□□□□ -2.5
ALX4Q9H161 TRAJ51-201ENST00000504127 63 ntBASIC-0.57□□□□□ -2.5
ALX4Q9H161 RNU7-35P-201ENST00000517174 62 ntBASIC-0.57□□□□□ -2.5
ALX4Q9H161 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.57□□□□□ -2.5
ALX4Q9H161 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.57□□□□□ -2.5
ALX4Q9H161 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.57□□□□□ -2.5
ALX4Q9H161 MIR548H5-201ENST00000580314 60 ntBASIC-0.57□□□□□ -2.5
ALX4Q9H161 RNU6-86P-201ENST00000606534 107 ntBASIC-0.57□□□□□ -2.5
ALX4Q9H161 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.58□□□□□ -2.5
ALX4Q9H161 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.58□□□□□ -2.5
ALX4Q9H161 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.58□□□□□ -2.5
ALX4Q9H161 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.58□□□□□ -2.5
ALX4Q9H161 RNU6-449P-201ENST00000383914 107 ntBASIC-0.58□□□□□ -2.5
ALX4Q9H161 MIR635-201ENST00000384830 98 ntBASIC-0.58□□□□□ -2.5
ALX4Q9H161 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.58□□□□□ -2.5
ALX4Q9H161 AL445193.1-201ENST00000441183 141 ntBASIC-0.58□□□□□ -2.5
ALX4Q9H161 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.58□□□□□ -2.5
ALX4Q9H161 AL365205.2-201ENST00000594586 68 ntBASIC-0.58□□□□□ -2.5
ALX4Q9H161 AL132765.2-201ENST00000610812 351 ntBASIC-0.58□□□□□ -2.5
ALX4Q9H161 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.58□□□□□ -2.5
ALX4Q9H161 U4.1-201ENST00000620349 87 ntBASIC-0.58□□□□□ -2.5
ALX4Q9H161 Y_RNA.70-201ENST00000362886 110 ntBASIC-0.59□□□□□ -2.5
ALX4Q9H161 Y_RNA.248-201ENST00000364501 109 ntBASIC-0.59□□□□□ -2.5
ALX4Q9H161 RNU6-211P-201ENST00000384047 107 ntBASIC-0.59□□□□□ -2.5
ALX4Q9H161 MIR599-201ENST00000385069 95 ntBASIC-0.59□□□□□ -2.5
ALX4Q9H161 MT-TT-201ENST00000387460 66 ntBASIC-0.59□□□□□ -2.5
ALX4Q9H161 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.59□□□□□ -2.5
ALX4Q9H161 AL606845.1-201ENST00000404881 255 ntBASIC-0.59□□□□□ -2.5
ALX4Q9H161 AC093423.1-201ENST00000440817 142 ntBASIC-0.59□□□□□ -2.5
ALX4Q9H161 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.59□□□□□ -2.5
ALX4Q9H161 SNORD38.3-201ENST00000516599 73 ntBASIC-0.59□□□□□ -2.5
ALX4Q9H161 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.59□□□□□ -2.5
ALX4Q9H161 MIR548AG2-201ENST00000581228 64 ntBASIC-0.59□□□□□ -2.5
ALX4Q9H161 RNU7-10P-201ENST00000607194 63 ntBASIC-0.59□□□□□ -2.5
ALX4Q9H161 UBE2WP1-201ENST00000362030 340 ntBASIC-0.6□□□□□ -2.51
ALX4Q9H161 MIR196A1-201ENST00000388006 70 ntBASIC-0.6□□□□□ -2.51
ALX4Q9H161 RNU6-721P-201ENST00000410155 105 ntBASIC-0.6□□□□□ -2.51
ALX4Q9H161 RNA5SP266-201ENST00000410273 108 ntBASIC-0.6□□□□□ -2.51
ALX4Q9H161 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.6□□□□□ -2.51
ALX4Q9H161 RNU6-881P-201ENST00000516813 102 ntBASIC-0.6□□□□□ -2.51
ALX4Q9H161 YWHAEP2-201ENST00000580066 112 ntBASIC-0.6□□□□□ -2.51
ALX4Q9H161 MIR3681-201ENST00000580089 72 ntBASIC-0.6□□□□□ -2.51
ALX4Q9H161 AL359881.1-201ENST00000602916 267 ntBASIC-0.6□□□□□ -2.51
ALX4Q9H161 AC098479.1-201ENST00000609225 154 ntBASIC-0.6□□□□□ -2.51
ALX4Q9H161 AC145423.2-201ENST00000610631 239 ntBASIC-0.6□□□□□ -2.51
ALX4Q9H161 U6atac.1-201ENST00000616025 117 ntBASIC-0.6□□□□□ -2.51
ALX4Q9H161 uc_338.10-201ENST00000621872 182 ntBASIC-0.6□□□□□ -2.51
ALX4Q9H161 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.61□□□□□ -2.51
ALX4Q9H161 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.61□□□□□ -2.51
ALX4Q9H161 RNU4-16P-201ENST00000364737 141 ntBASIC-0.61□□□□□ -2.51
ALX4Q9H161 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.61□□□□□ -2.51
ALX4Q9H161 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.61□□□□□ -2.51
ALX4Q9H161 RNU6-900P-201ENST00000384498 102 ntBASIC-0.61□□□□□ -2.51
ALX4Q9H161 MIR616-201ENST00000385293 97 ntBASIC-0.61□□□□□ -2.51
ALX4Q9H161 AC138393.2-201ENST00000414742 246 ntBASIC-0.61□□□□□ -2.51
ALX4Q9H161 MTATP6P23-201ENST00000440153 476 ntBASIC-0.61□□□□□ -2.51
ALX4Q9H161 RNU7-137P-201ENST00000516788 62 ntBASIC-0.61□□□□□ -2.51
ALX4Q9H161 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.61□□□□□ -2.51
ALX4Q9H161 MTND5P40-201ENST00000559945 246 ntBASIC-0.61□□□□□ -2.51
ALX4Q9H161 MIR6851-201ENST00000617060 67 ntBASIC-0.61□□□□□ -2.51
ALX4Q9H161 AC069503.3-201ENST00000618674 145 ntBASIC-0.61□□□□□ -2.51
ALX4Q9H161 SNORD114-29-201ENST00000364819 70 ntBASIC-0.62□□□□□ -2.51
ALX4Q9H161 SNORD115-44-201ENST00000365391 82 ntBASIC-0.62□□□□□ -2.51
ALX4Q9H161 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.62□□□□□ -2.51
ALX4Q9H161 MIR519E-201ENST00000385075 84 ntBASIC-0.62□□□□□ -2.51
ALX4Q9H161 MIR204-201ENST00000385200 110 ntBASIC-0.62□□□□□ -2.51
ALX4Q9H161 SNORA49-201ENST00000386157 136 ntBASIC-0.62□□□□□ -2.51
ALX4Q9H161 SNORA79-201ENST00000408376 140 ntBASIC-0.62□□□□□ -2.51
ALX4Q9H161 RNU6-570P-201ENST00000517051 105 ntBASIC-0.62□□□□□ -2.51
ALX4Q9H161 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.62□□□□□ -2.51
ALX4Q9H161 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.62□□□□□ -2.51
ALX4Q9H161 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.63□□□□□ -2.51
ALX4Q9H161 RNU6-154P-201ENST00000384306 106 ntBASIC-0.63□□□□□ -2.51
ALX4Q9H161 RNU6-121P-201ENST00000410525 99 ntBASIC-0.63□□□□□ -2.51
ALX4Q9H161 AC097635.1-201ENST00000450678 155 ntBASIC-0.63□□□□□ -2.51
ALX4Q9H161 AL500527.2-201ENST00000454105 95 ntBASIC-0.63□□□□□ -2.51
ALX4Q9H161 snoU13.13-201ENST00000458842 104 ntBASIC-0.63□□□□□ -2.51
ALX4Q9H161 AC021146.6-201ENST00000514659 117 ntBASIC-0.63□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 185.8 ms