Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 MIR103A2-201ENST00000362154 78 ntBASIC1.52□□□□□ -2.17
NDC1Q9BTX1 SNORD114-10-201ENST00000363409 72 ntBASIC1.52□□□□□ -2.17
NDC1Q9BTX1 RNA5SP363-201ENST00000365072 115 ntBASIC1.52□□□□□ -2.17
NDC1Q9BTX1 Y_RNA.369-201ENST00000365568 117 ntBASIC1.52□□□□□ -2.17
NDC1Q9BTX1 Y_RNA.377-201ENST00000365644 108 ntBASIC1.52□□□□□ -2.17
NDC1Q9BTX1 Y_RNA.448-201ENST00000384185 108 ntBASIC1.52□□□□□ -2.17
NDC1Q9BTX1 RNU6-205P-201ENST00000390858 107 ntBASIC1.52□□□□□ -2.17
NDC1Q9BTX1 UBL5P1-201ENST00000507979 193 ntBASIC1.52□□□□□ -2.17
NDC1Q9BTX1 RNU6-795P-201ENST00000516323 103 ntBASIC1.52□□□□□ -2.17
NDC1Q9BTX1 MIR2115-201ENST00000516657 100 ntBASIC1.52□□□□□ -2.17
NDC1Q9BTX1 MIR4264-201ENST00000583520 66 ntBASIC1.52□□□□□ -2.17
NDC1Q9BTX1 AC006254.2-201ENST00000603259 279 ntBASIC1.52□□□□□ -2.17
NDC1Q9BTX1 BX248123.2-201ENST00000606318 124 ntBASIC1.52□□□□□ -2.17
NDC1Q9BTX1 AC012531.4-201ENST00000616509 177 ntBASIC1.52□□□□□ -2.17
NDC1Q9BTX1 MIR6740-201ENST00000618268 113 ntBASIC1.52□□□□□ -2.17
NDC1Q9BTX1 MIR6516-201ENST00000630554 81 ntBASIC1.52□□□□□ -2.17
NDC1Q9BTX1 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.51□□□□□ -2.17
NDC1Q9BTX1 RNA5SP264-201ENST00000363115 107 ntBASIC1.51□□□□□ -2.17
NDC1Q9BTX1 Y_RNA.226-201ENST00000364337 114 ntBASIC1.51□□□□□ -2.17
NDC1Q9BTX1 RNU6-1131P-201ENST00000364955 107 ntBASIC1.51□□□□□ -2.17
NDC1Q9BTX1 MIR488-201ENST00000365739 83 ntBASIC1.51□□□□□ -2.17
NDC1Q9BTX1 Y_RNA.466-201ENST00000384294 113 ntBASIC1.51□□□□□ -2.17
NDC1Q9BTX1 RNU6-1321P-201ENST00000390905 107 ntBASIC1.51□□□□□ -2.17
NDC1Q9BTX1 RNU11-2P-201ENST00000516898 142 ntBASIC1.51□□□□□ -2.17
NDC1Q9BTX1 AP000753.3-201ENST00000604083 169 ntBASIC1.51□□□□□ -2.17
NDC1Q9BTX1 AL359821.1-201ENST00000605519 182 ntBASIC1.51□□□□□ -2.17
NDC1Q9BTX1 AL512598.1-201ENST00000610158 273 ntBASIC1.51□□□□□ -2.17
NDC1Q9BTX1 MIR2052-201ENST00000636055 55 ntBASIC1.51□□□□□ -2.17
NDC1Q9BTX1 AC091304.10-201ENST00000641554 121 ntBASIC1.51□□□□□ -2.17
NDC1Q9BTX1 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.5□□□□□ -2.17
NDC1Q9BTX1 RNU6-170P-201ENST00000362832 104 ntBASIC1.5□□□□□ -2.17
NDC1Q9BTX1 RNU6-654P-201ENST00000364373 107 ntBASIC1.5□□□□□ -2.17
NDC1Q9BTX1 MIR34C-201ENST00000384831 77 ntBASIC1.5□□□□□ -2.17
NDC1Q9BTX1 MIR517C-201ENST00000385103 95 ntBASIC1.5□□□□□ -2.17
NDC1Q9BTX1 MT-TN-201ENST00000387400 73 ntBASIC1.5□□□□□ -2.17
NDC1Q9BTX1 SNORA67.6-201ENST00000391093 99 ntBASIC1.5□□□□□ -2.17
NDC1Q9BTX1 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.5□□□□□ -2.17
NDC1Q9BTX1 TRMT112P2-201ENST00000512910 132 ntBASIC1.5□□□□□ -2.17
NDC1Q9BTX1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.5□□□□□ -2.17
NDC1Q9BTX1 MIR548Z-201ENST00000584743 97 ntBASIC1.5□□□□□ -2.17
NDC1Q9BTX1 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.5□□□□□ -2.17
NDC1Q9BTX1 MIR4679-1-201ENST00000637619 75 ntBASIC1.5□□□□□ -2.17
NDC1Q9BTX1 Y_RNA.247-201ENST00000364500 92 ntBASIC1.49□□□□□ -2.17
NDC1Q9BTX1 RNU6-49P-201ENST00000384256 107 ntBASIC1.49□□□□□ -2.17
NDC1Q9BTX1 MIR563-201ENST00000385080 79 ntBASIC1.49□□□□□ -2.17
NDC1Q9BTX1 RNU6-1054P-201ENST00000411293 104 ntBASIC1.49□□□□□ -2.17
NDC1Q9BTX1 Y_RNA.659-201ENST00000515994 113 ntBASIC1.49□□□□□ -2.17
NDC1Q9BTX1 MIR4285-201ENST00000581001 85 ntBASIC1.49□□□□□ -2.17
NDC1Q9BTX1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.49□□□□□ -2.17
NDC1Q9BTX1 RNY1P10-201ENST00000363268 113 ntBASIC1.48□□□□□ -2.17
NDC1Q9BTX1 SNORD45B-201ENST00000364617 72 ntBASIC1.48□□□□□ -2.17
NDC1Q9BTX1 RNU6-865P-201ENST00000364772 107 ntBASIC1.48□□□□□ -2.17
NDC1Q9BTX1 RNU6-949P-201ENST00000384040 107 ntBASIC1.48□□□□□ -2.17
NDC1Q9BTX1 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.48□□□□□ -2.17
NDC1Q9BTX1 RNU6-447P-201ENST00000410293 104 ntBASIC1.48□□□□□ -2.17
NDC1Q9BTX1 RNA5SP95-201ENST00000410319 137 ntBASIC1.48□□□□□ -2.17
NDC1Q9BTX1 RNU6-1118P-201ENST00000410382 104 ntBASIC1.48□□□□□ -2.17
NDC1Q9BTX1 RNU6-1076P-201ENST00000410397 104 ntBASIC1.48□□□□□ -2.17
NDC1Q9BTX1 RNU6-355P-201ENST00000410427 104 ntBASIC1.48□□□□□ -2.17
NDC1Q9BTX1 RNU6-791P-201ENST00000410467 104 ntBASIC1.48□□□□□ -2.17
NDC1Q9BTX1 RNU6-705P-201ENST00000410601 104 ntBASIC1.48□□□□□ -2.17
NDC1Q9BTX1 RNU6-1100P-201ENST00000410691 104 ntBASIC1.48□□□□□ -2.17
NDC1Q9BTX1 RNU6-860P-201ENST00000410860 104 ntBASIC1.48□□□□□ -2.17
NDC1Q9BTX1 RNU6-1217P-201ENST00000411276 104 ntBASIC1.48□□□□□ -2.17
NDC1Q9BTX1 RNU6-785P-201ENST00000411324 104 ntBASIC1.48□□□□□ -2.17
NDC1Q9BTX1 AC004941.2-201ENST00000427009 228 ntBASIC1.48□□□□□ -2.17
NDC1Q9BTX1 RNU7-62P-201ENST00000458856 62 ntBASIC1.48□□□□□ -2.17
NDC1Q9BTX1 RNU7-95P-201ENST00000459222 64 ntBASIC1.48□□□□□ -2.17
NDC1Q9BTX1 RNU7-61P-201ENST00000515897 61 ntBASIC1.48□□□□□ -2.17
NDC1Q9BTX1 RNU6-1006P-201ENST00000516998 103 ntBASIC1.48□□□□□ -2.17
NDC1Q9BTX1 AC096720.1-201ENST00000604441 183 ntBASIC1.48□□□□□ -2.17
NDC1Q9BTX1 U6.90-201ENST00000614007 104 ntBASIC1.48□□□□□ -2.17
NDC1Q9BTX1 MIR376B-201ENST00000614515 100 ntBASIC1.48□□□□□ -2.17
NDC1Q9BTX1 U6.70-201ENST00000620287 104 ntBASIC1.48□□□□□ -2.17
NDC1Q9BTX1 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.48□□□□□ -2.17
NDC1Q9BTX1 MIR30D-201ENST00000362283 70 ntBASIC1.47□□□□□ -2.17
NDC1Q9BTX1 RNU1-42P-201ENST00000364033 160 ntBASIC1.47□□□□□ -2.17
NDC1Q9BTX1 RNU6-60P-201ENST00000364792 103 ntBASIC1.47□□□□□ -2.17
NDC1Q9BTX1 Y_RNA.342-201ENST00000365352 113 ntBASIC1.47□□□□□ -2.17
NDC1Q9BTX1 RNY1P7-201ENST00000384743 110 ntBASIC1.47□□□□□ -2.17
NDC1Q9BTX1 MIR1287-201ENST00000408492 90 ntBASIC1.47□□□□□ -2.17
NDC1Q9BTX1 RNU6-1165P-201ENST00000410119 107 ntBASIC1.47□□□□□ -2.17
NDC1Q9BTX1 RNU6-613P-201ENST00000410412 108 ntBASIC1.47□□□□□ -2.17
NDC1Q9BTX1 RNU7-48P-201ENST00000458875 63 ntBASIC1.47□□□□□ -2.17
NDC1Q9BTX1 AC048334.1-201ENST00000477975 159 ntBASIC1.47□□□□□ -2.17
NDC1Q9BTX1 MIR4777-201ENST00000583710 86 ntBASIC1.47□□□□□ -2.17
NDC1Q9BTX1 uc_338.6-201ENST00000613544 171 ntBASIC1.47□□□□□ -2.17
NDC1Q9BTX1 Y_RNA.95-201ENST00000363079 95 ntBASIC1.46□□□□□ -2.18
NDC1Q9BTX1 Y_RNA.98-201ENST00000363109 102 ntBASIC1.46□□□□□ -2.18
NDC1Q9BTX1 RNU6-644P-201ENST00000391155 98 ntBASIC1.46□□□□□ -2.18
NDC1Q9BTX1 AC096949.1-201ENST00000412047 152 ntBASIC1.46□□□□□ -2.18
NDC1Q9BTX1 RPS29P28-201ENST00000446439 141 ntBASIC1.46□□□□□ -2.18
NDC1Q9BTX1 AC023790.1-201ENST00000482174 347 ntBASIC1.46□□□□□ -2.18
NDC1Q9BTX1 SNORA31.2-201ENST00000516019 134 ntBASIC1.46□□□□□ -2.18
NDC1Q9BTX1 SNORA31.24-201ENST00000517232 57 ntBASIC1.46□□□□□ -2.18
NDC1Q9BTX1 AL645939.4-201ENST00000604495 135 ntBASIC1.46□□□□□ -2.18
NDC1Q9BTX1 MALAT1.1-201ENST00000618249 95 ntBASIC1.46□□□□□ -2.18
NDC1Q9BTX1 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
NDC1Q9BTX1 MIR377-201ENST00000362145 69 ntBASIC1.45□□□□□ -2.18
NDC1Q9BTX1 SNORD38.1-201ENST00000363863 68 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 193.6 ms