Protein–RNA interactions for Protein: Q9BQT9

CLSTN3, Calsyntenin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3Q9BQT9 RNU7-123P-201ENST00000515911 60 ntBASIC0.87□□□□□ -2.27
CLSTN3Q9BQT9 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.87□□□□□ -2.27
CLSTN3Q9BQT9 AC004812.1-201ENST00000540773 146 ntBASIC0.87□□□□□ -2.27
CLSTN3Q9BQT9 AL590095.2-201ENST00000604136 117 ntBASIC0.87□□□□□ -2.27
CLSTN3Q9BQT9 AL137067.1-201ENST00000615933 120 ntBASIC0.87□□□□□ -2.27
CLSTN3Q9BQT9 RNU6-369P-201ENST00000362515 102 ntBASIC0.86□□□□□ -2.27
CLSTN3Q9BQT9 Y_RNA.280-201ENST00000364765 112 ntBASIC0.86□□□□□ -2.27
CLSTN3Q9BQT9 Y_RNA.298-201ENST00000364960 107 ntBASIC0.86□□□□□ -2.27
CLSTN3Q9BQT9 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
CLSTN3Q9BQT9 Y_RNA.531-201ENST00000384589 121 ntBASIC0.86□□□□□ -2.27
CLSTN3Q9BQT9 SNORA40-201ENST00000388090 126 ntBASIC0.86□□□□□ -2.27
CLSTN3Q9BQT9 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.86□□□□□ -2.27
CLSTN3Q9BQT9 RNU7-185P-201ENST00000459215 60 ntBASIC0.86□□□□□ -2.27
CLSTN3Q9BQT9 RPL39P28-201ENST00000465655 155 ntBASIC0.86□□□□□ -2.27
CLSTN3Q9BQT9 RNA5SP33-201ENST00000516687 98 ntBASIC0.86□□□□□ -2.27
CLSTN3Q9BQT9 MIR4676-201ENST00000583078 72 ntBASIC0.86□□□□□ -2.27
CLSTN3Q9BQT9 AL353765.1-201ENST00000605514 183 ntBASIC0.86□□□□□ -2.27
CLSTN3Q9BQT9 AC023934.1-201ENST00000574529 2389 ntBASIC0.86□□□□□ -2.27
CLSTN3Q9BQT9 RNA5SP457-201ENST00000363657 124 ntBASIC0.85□□□□□ -2.27
CLSTN3Q9BQT9 Y_RNA.299-201ENST00000364973 94 ntBASIC0.85□□□□□ -2.27
CLSTN3Q9BQT9 MIR520F-201ENST00000384824 87 ntBASIC0.85□□□□□ -2.27
CLSTN3Q9BQT9 MIR125B2-201ENST00000385128 89 ntBASIC0.85□□□□□ -2.27
CLSTN3Q9BQT9 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.85□□□□□ -2.27
CLSTN3Q9BQT9 RNU6-447P-201ENST00000410293 104 ntBASIC0.85□□□□□ -2.27
CLSTN3Q9BQT9 RNU6-1118P-201ENST00000410382 104 ntBASIC0.85□□□□□ -2.27
CLSTN3Q9BQT9 RNU6-1076P-201ENST00000410397 104 ntBASIC0.85□□□□□ -2.27
CLSTN3Q9BQT9 RNU6-355P-201ENST00000410427 104 ntBASIC0.85□□□□□ -2.27
CLSTN3Q9BQT9 RNU6-791P-201ENST00000410467 104 ntBASIC0.85□□□□□ -2.27
CLSTN3Q9BQT9 RNU6-705P-201ENST00000410601 104 ntBASIC0.85□□□□□ -2.27
CLSTN3Q9BQT9 RNU6-1100P-201ENST00000410691 104 ntBASIC0.85□□□□□ -2.27
CLSTN3Q9BQT9 RNU6-860P-201ENST00000410860 104 ntBASIC0.85□□□□□ -2.27
CLSTN3Q9BQT9 RNU6-1217P-201ENST00000411276 104 ntBASIC0.85□□□□□ -2.27
CLSTN3Q9BQT9 RNU6-785P-201ENST00000411324 104 ntBASIC0.85□□□□□ -2.27
CLSTN3Q9BQT9 IGKV1-22-201ENST00000524313 326 ntBASIC0.85□□□□□ -2.27
CLSTN3Q9BQT9 AC141846.1-201ENST00000568348 142 ntBASIC0.85□□□□□ -2.27
CLSTN3Q9BQT9 MIR4714-201ENST00000580728 77 ntBASIC0.85□□□□□ -2.27
CLSTN3Q9BQT9 U6.90-201ENST00000614007 104 ntBASIC0.85□□□□□ -2.27
CLSTN3Q9BQT9 TUG1_4.1-201ENST00000619464 181 ntBASIC0.85□□□□□ -2.27
CLSTN3Q9BQT9 U6.70-201ENST00000620287 104 ntBASIC0.85□□□□□ -2.27
CLSTN3Q9BQT9 MIR6513-201ENST00000621188 64 ntBASIC0.85□□□□□ -2.27
CLSTN3Q9BQT9 RNU6-647P-201ENST00000364243 107 ntBASIC0.84□□□□□ -2.27
CLSTN3Q9BQT9 RNU6-187P-201ENST00000384139 106 ntBASIC0.84□□□□□ -2.27
CLSTN3Q9BQT9 RNU6-364P-201ENST00000384387 107 ntBASIC0.84□□□□□ -2.27
CLSTN3Q9BQT9 RNU1-119P-201ENST00000391122 165 ntBASIC0.84□□□□□ -2.27
CLSTN3Q9BQT9 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.84□□□□□ -2.27
CLSTN3Q9BQT9 AL158147.1-201ENST00000443970 75 ntBASIC0.84□□□□□ -2.27
CLSTN3Q9BQT9 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.84□□□□□ -2.27
CLSTN3Q9BQT9 MIR4804-201ENST00000581683 73 ntBASIC0.84□□□□□ -2.27
CLSTN3Q9BQT9 AC020891.4-201ENST00000605745 93 ntBASIC0.84□□□□□ -2.27
CLSTN3Q9BQT9 RNU6-1335P-201ENST00000365426 107 ntBASIC0.83□□□□□ -2.28
CLSTN3Q9BQT9 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.83□□□□□ -2.28
CLSTN3Q9BQT9 SNORD93-201ENST00000408813 74 ntBASIC0.83□□□□□ -2.28
CLSTN3Q9BQT9 RN7SKP19-201ENST00000516016 252 ntBASIC0.83□□□□□ -2.28
CLSTN3Q9BQT9 RNU6-351P-201ENST00000516097 100 ntBASIC0.83□□□□□ -2.28
CLSTN3Q9BQT9 RNY4P20-201ENST00000516678 93 ntBASIC0.83□□□□□ -2.28
CLSTN3Q9BQT9 MIR548AE2-201ENST00000583456 67 ntBASIC0.83□□□□□ -2.28
CLSTN3Q9BQT9 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.83□□□□□ -2.28
CLSTN3Q9BQT9 SNORD114-2-201ENST00000363953 78 ntBASIC0.82□□□□□ -2.28
CLSTN3Q9BQT9 RNY1P13-201ENST00000365030 105 ntBASIC0.82□□□□□ -2.28
CLSTN3Q9BQT9 RNU6-949P-201ENST00000384040 107 ntBASIC0.82□□□□□ -2.28
CLSTN3Q9BQT9 SNORA32-201ENST00000384072 121 ntBASIC0.82□□□□□ -2.28
CLSTN3Q9BQT9 RNU6-110P-201ENST00000384508 104 ntBASIC0.82□□□□□ -2.28
CLSTN3Q9BQT9 MIR146A-201ENST00000385201 99 ntBASIC0.82□□□□□ -2.28
CLSTN3Q9BQT9 Y_RNA.586-201ENST00000391146 98 ntBASIC0.82□□□□□ -2.28
CLSTN3Q9BQT9 MIR548M-201ENST00000408260 86 ntBASIC0.82□□□□□ -2.28
CLSTN3Q9BQT9 SNORD99-201ENST00000408612 74 ntBASIC0.82□□□□□ -2.28
CLSTN3Q9BQT9 RNU7-79P-201ENST00000516082 62 ntBASIC0.82□□□□□ -2.28
CLSTN3Q9BQT9 ACA64.5-201ENST00000516207 127 ntBASIC0.82□□□□□ -2.28
CLSTN3Q9BQT9 RNU7-35P-201ENST00000517174 62 ntBASIC0.82□□□□□ -2.28
CLSTN3Q9BQT9 AC022523.2-201ENST00000561045 150 ntBASIC0.82□□□□□ -2.28
CLSTN3Q9BQT9 AC133485.1-201ENST00000567176 124 ntBASIC0.82□□□□□ -2.28
CLSTN3Q9BQT9 AC138907.6-201ENST00000568401 126 ntBASIC0.82□□□□□ -2.28
CLSTN3Q9BQT9 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.82□□□□□ -2.28
CLSTN3Q9BQT9 RNU6-235P-201ENST00000362644 107 ntBASIC0.81□□□□□ -2.28
CLSTN3Q9BQT9 SNORD50.2-201ENST00000365465 70 ntBASIC0.81□□□□□ -2.28
CLSTN3Q9BQT9 RNU6-1104P-201ENST00000384723 104 ntBASIC0.81□□□□□ -2.28
CLSTN3Q9BQT9 Y_RNA.617-201ENST00000410920 90 ntBASIC0.81□□□□□ -2.28
CLSTN3Q9BQT9 MIR6835-201ENST00000621552 64 ntBASIC0.81□□□□□ -2.28
CLSTN3Q9BQT9 AC010487.4-201ENST00000637027 61 ntBASIC0.81□□□□□ -2.28
CLSTN3Q9BQT9 SNORD114-23-201ENST00000363536 72 ntBASIC0.8□□□□□ -2.28
CLSTN3Q9BQT9 RNU4-45P-201ENST00000365469 141 ntBASIC0.8□□□□□ -2.28
CLSTN3Q9BQT9 MIR520H-201ENST00000385126 88 ntBASIC0.8□□□□□ -2.28
CLSTN3Q9BQT9 U8.15-201ENST00000390947 134 ntBASIC0.8□□□□□ -2.28
CLSTN3Q9BQT9 RNU4-69P-201ENST00000410677 143 ntBASIC0.8□□□□□ -2.28
CLSTN3Q9BQT9 RNU7-56P-201ENST00000458744 62 ntBASIC0.8□□□□□ -2.28
CLSTN3Q9BQT9 RNU6-1211P-201ENST00000459179 105 ntBASIC0.8□□□□□ -2.28
CLSTN3Q9BQT9 MIR1270-201ENST00000459320 83 ntBASIC0.8□□□□□ -2.28
CLSTN3Q9BQT9 RNU7-156P-201ENST00000517214 74 ntBASIC0.8□□□□□ -2.28
CLSTN3Q9BQT9 SNORD92-201ENST00000585078 85 ntBASIC0.8□□□□□ -2.28
CLSTN3Q9BQT9 MIR924-201ENST00000638017 53 ntBASIC0.8□□□□□ -2.28
CLSTN3Q9BQT9 Y_RNA.30-201ENST00000362572 97 ntBASIC0.79□□□□□ -2.28
CLSTN3Q9BQT9 RNU6-704P-201ENST00000364162 103 ntBASIC0.79□□□□□ -2.28
CLSTN3Q9BQT9 MIR1263-201ENST00000408324 86 ntBASIC0.79□□□□□ -2.28
CLSTN3Q9BQT9 RNU6-781P-201ENST00000516377 101 ntBASIC0.79□□□□□ -2.28
CLSTN3Q9BQT9 RNU6-971P-201ENST00000516920 106 ntBASIC0.79□□□□□ -2.28
CLSTN3Q9BQT9 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.79□□□□□ -2.28
CLSTN3Q9BQT9 MIR4653-201ENST00000585107 83 ntBASIC0.79□□□□□ -2.28
CLSTN3Q9BQT9 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.28
CLSTN3Q9BQT9 AL589743.1-201ENST00000551932 2712 ntBASIC0.78□□□□□ -2.28
CLSTN3Q9BQT9 MIR539-201ENST00000365690 78 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 199.7 ms