Protein–RNA interactions for Protein: Q96FI4

NEIL1, Endonuclease 8-like 1, humanhuman

Predicted RBP Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1Q96FI4 RN7SL274P-201ENST00000492268 272 ntBASIC1.66□□□□□ -2.14
NEIL1Q96FI4 AC019176.1-201ENST00000518519 225 ntBASIC1.66□□□□□ -2.14
NEIL1Q96FI4 RNU6-90P-201ENST00000606352 106 ntBASIC1.66□□□□□ -2.14
NEIL1Q96FI4 IGLL4P-201ENST00000614590 133 ntBASIC1.66□□□□□ -2.14
NEIL1Q96FI4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.66□□□□□ -2.14
NEIL1Q96FI4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
NEIL1Q96FI4 MIR302D-201ENST00000362275 68 ntBASIC1.65□□□□□ -2.15
NEIL1Q96FI4 Y_RNA.73-201ENST00000362910 113 ntBASIC1.65□□□□□ -2.15
NEIL1Q96FI4 SNORD116-22-201ENST00000384430 92 ntBASIC1.65□□□□□ -2.15
NEIL1Q96FI4 MIR563-201ENST00000385080 79 ntBASIC1.65□□□□□ -2.15
NEIL1Q96FI4 SUMO2P12-201ENST00000405924 140 ntBASIC1.65□□□□□ -2.15
NEIL1Q96FI4 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.65□□□□□ -2.15
NEIL1Q96FI4 SPINT5P-201ENST00000448174 155 ntBASIC1.65□□□□□ -2.15
NEIL1Q96FI4 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.65□□□□□ -2.15
NEIL1Q96FI4 AC022137.1-201ENST00000483735 151 ntBASIC1.65□□□□□ -2.15
NEIL1Q96FI4 AP003716.2-201ENST00000528260 108 ntBASIC1.65□□□□□ -2.15
NEIL1Q96FI4 AP003327.1-201ENST00000529684 127 ntBASIC1.65□□□□□ -2.15
NEIL1Q96FI4 AC133485.1-201ENST00000567176 124 ntBASIC1.65□□□□□ -2.15
NEIL1Q96FI4 AC104984.5-201ENST00000586878 94 ntBASIC1.65□□□□□ -2.15
NEIL1Q96FI4 MIR6740-201ENST00000618268 113 ntBASIC1.65□□□□□ -2.15
NEIL1Q96FI4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
NEIL1Q96FI4 Y_RNA.173-201ENST00000363776 113 ntBASIC1.64□□□□□ -2.15
NEIL1Q96FI4 RNU6-219P-201ENST00000364728 107 ntBASIC1.64□□□□□ -2.15
NEIL1Q96FI4 SNORD38.2-201ENST00000384470 69 ntBASIC1.64□□□□□ -2.15
NEIL1Q96FI4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.64□□□□□ -2.15
NEIL1Q96FI4 RPL39P39-201ENST00000455840 151 ntBASIC1.64□□□□□ -2.15
NEIL1Q96FI4 RNU6-267P-201ENST00000516714 103 ntBASIC1.64□□□□□ -2.15
NEIL1Q96FI4 MIR4264-201ENST00000583520 66 ntBASIC1.64□□□□□ -2.15
NEIL1Q96FI4 AC012676.2-201ENST00000619258 186 ntBASIC1.64□□□□□ -2.15
NEIL1Q96FI4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.64□□□□□ -2.15
NEIL1Q96FI4 MIR504-201ENST00000385065 83 ntBASIC1.63□□□□□ -2.15
NEIL1Q96FI4 RNU6-205P-201ENST00000390858 107 ntBASIC1.63□□□□□ -2.15
NEIL1Q96FI4 RNU1-98P-201ENST00000458992 160 ntBASIC1.63□□□□□ -2.15
NEIL1Q96FI4 MIR2115-201ENST00000516657 100 ntBASIC1.63□□□□□ -2.15
NEIL1Q96FI4 MTND5P40-201ENST00000559945 246 ntBASIC1.63□□□□□ -2.15
NEIL1Q96FI4 MIR6715A-201ENST00000615929 79 ntBASIC1.63□□□□□ -2.15
NEIL1Q96FI4 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.62□□□□□ -2.15
NEIL1Q96FI4 MIR30D-201ENST00000362283 70 ntBASIC1.62□□□□□ -2.15
NEIL1Q96FI4 Y_RNA.219-201ENST00000364232 113 ntBASIC1.62□□□□□ -2.15
NEIL1Q96FI4 RNY1P2-201ENST00000364820 117 ntBASIC1.62□□□□□ -2.15
NEIL1Q96FI4 MIR583-201ENST00000384846 75 ntBASIC1.62□□□□□ -2.15
NEIL1Q96FI4 MT-TN-201ENST00000387400 73 ntBASIC1.62□□□□□ -2.15
NEIL1Q96FI4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.62□□□□□ -2.15
NEIL1Q96FI4 RNU6-1275P-201ENST00000391087 107 ntBASIC1.62□□□□□ -2.15
NEIL1Q96FI4 MIR1185-1-201ENST00000408598 86 ntBASIC1.62□□□□□ -2.15
NEIL1Q96FI4 RNU6-1165P-201ENST00000410119 107 ntBASIC1.62□□□□□ -2.15
NEIL1Q96FI4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.62□□□□□ -2.15
NEIL1Q96FI4 AL133373.1-201ENST00000497098 94 ntBASIC1.62□□□□□ -2.15
NEIL1Q96FI4 RNA5SP182-201ENST00000516064 82 ntBASIC1.62□□□□□ -2.15
NEIL1Q96FI4 RNU6-902P-201ENST00000517212 91 ntBASIC1.62□□□□□ -2.15
NEIL1Q96FI4 MIR5089-201ENST00000580047 84 ntBASIC1.62□□□□□ -2.15
NEIL1Q96FI4 MIR4668-201ENST00000582284 70 ntBASIC1.62□□□□□ -2.15
NEIL1Q96FI4 SNRPGP19-201ENST00000603826 189 ntBASIC1.62□□□□□ -2.15
NEIL1Q96FI4 AP000753.3-201ENST00000604083 169 ntBASIC1.62□□□□□ -2.15
NEIL1Q96FI4 AC020891.4-201ENST00000605745 93 ntBASIC1.62□□□□□ -2.15
NEIL1Q96FI4 MIR6516-201ENST00000630554 81 ntBASIC1.62□□□□□ -2.15
NEIL1Q96FI4 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
NEIL1Q96FI4 HSBP1P2-201ENST00000299671 229 ntBASIC1.61□□□□□ -2.15
NEIL1Q96FI4 Y_RNA.168-201ENST00000363740 102 ntBASIC1.61□□□□□ -2.15
NEIL1Q96FI4 Y_RNA.620-201ENST00000411009 88 ntBASIC1.61□□□□□ -2.15
NEIL1Q96FI4 AC138749.4-201ENST00000563970 127 ntBASIC1.61□□□□□ -2.15
NEIL1Q96FI4 SNORA4-201ENST00000584302 138 ntBASIC1.61□□□□□ -2.15
NEIL1Q96FI4 uc_338.6-201ENST00000613544 171 ntBASIC1.61□□□□□ -2.15
NEIL1Q96FI4 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.61□□□□□ -2.15
NEIL1Q96FI4 RNA5SP264-201ENST00000363115 107 ntBASIC1.6□□□□□ -2.15
NEIL1Q96FI4 RNU6-497P-201ENST00000365316 104 ntBASIC1.6□□□□□ -2.15
NEIL1Q96FI4 RNY1P4-201ENST00000384595 115 ntBASIC1.6□□□□□ -2.15
NEIL1Q96FI4 SNORD78.1-201ENST00000390866 65 ntBASIC1.6□□□□□ -2.15
NEIL1Q96FI4 MIR1289-2-201ENST00000408360 111 ntBASIC1.6□□□□□ -2.15
NEIL1Q96FI4 RNU7-62P-201ENST00000458856 62 ntBASIC1.6□□□□□ -2.15
NEIL1Q96FI4 RPL30P7-201ENST00000479312 323 ntBASIC1.6□□□□□ -2.15
NEIL1Q96FI4 RPS29P11-201ENST00000496507 171 ntBASIC1.6□□□□□ -2.15
NEIL1Q96FI4 RNU11-2P-201ENST00000516898 142 ntBASIC1.6□□□□□ -2.15
NEIL1Q96FI4 AC090897.1-201ENST00000580909 226 ntBASIC1.6□□□□□ -2.15
NEIL1Q96FI4 AC012493.3-201ENST00000604494 112 ntBASIC1.6□□□□□ -2.15
NEIL1Q96FI4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.6□□□□□ -2.15
NEIL1Q96FI4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
NEIL1Q96FI4 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
NEIL1Q96FI4 MIR103A2-201ENST00000362154 78 ntBASIC1.59□□□□□ -2.15
NEIL1Q96FI4 RNU6-654P-201ENST00000364373 107 ntBASIC1.59□□□□□ -2.15
NEIL1Q96FI4 SNORA2B-201ENST00000384583 137 ntBASIC1.59□□□□□ -2.15
NEIL1Q96FI4 MIR181B2-201ENST00000385004 89 ntBASIC1.59□□□□□ -2.15
NEIL1Q96FI4 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
NEIL1Q96FI4 Y_RNA.609-201ENST00000410669 89 ntBASIC1.59□□□□□ -2.15
NEIL1Q96FI4 MIR7843-201ENST00000622274 79 ntBASIC1.59□□□□□ -2.15
NEIL1Q96FI4 RNU6-1276P-201ENST00000365372 104 ntBASIC1.58□□□□□ -2.16
NEIL1Q96FI4 RNU6-979P-201ENST00000383896 107 ntBASIC1.58□□□□□ -2.16
NEIL1Q96FI4 RNU6-242P-201ENST00000384359 107 ntBASIC1.58□□□□□ -2.16
NEIL1Q96FI4 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.58□□□□□ -2.16
NEIL1Q96FI4 U8.13-201ENST00000390842 128 ntBASIC1.58□□□□□ -2.16
NEIL1Q96FI4 RNA5SP95-201ENST00000410319 137 ntBASIC1.58□□□□□ -2.16
NEIL1Q96FI4 RNU6-613P-201ENST00000410412 108 ntBASIC1.58□□□□□ -2.16
NEIL1Q96FI4 RNU6-295P-201ENST00000516901 104 ntBASIC1.58□□□□□ -2.16
NEIL1Q96FI4 AL513043.2-201ENST00000573941 143 ntBASIC1.58□□□□□ -2.16
NEIL1Q96FI4 AC025521.1-201ENST00000621624 286 ntBASIC1.58□□□□□ -2.16
NEIL1Q96FI4 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.58□□□□□ -2.16
NEIL1Q96FI4 U6.109-201ENST00000636749 87 ntBASIC1.58□□□□□ -2.16
NEIL1Q96FI4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.58□□□□□ -2.16
NEIL1Q96FI4 MIR377-201ENST00000362145 69 ntBASIC1.57□□□□□ -2.16
NEIL1Q96FI4 RNU6-228P-201ENST00000362700 106 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 214.9 ms