Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 MIR4251-201ENST00000635819 61 ntBASIC1.92□□□□□ -2.1
DDX11Q96FC9 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
DDX11Q96FC9 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
DDX11Q96FC9 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
DDX11Q96FC9 Y_RNA.219-201ENST00000364232 113 ntBASIC1.91□□□□□ -2.1
DDX11Q96FC9 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.91□□□□□ -2.1
DDX11Q96FC9 MIR1302-7-201ENST00000408841 72 ntBASIC1.91□□□□□ -2.1
DDX11Q96FC9 RNU6-1086P-201ENST00000410930 100 ntBASIC1.91□□□□□ -2.1
DDX11Q96FC9 Y_RNA.659-201ENST00000515994 113 ntBASIC1.91□□□□□ -2.1
DDX11Q96FC9 CYP3A52P-201ENST00000563326 91 ntBASIC1.91□□□□□ -2.1
DDX11Q96FC9 AC096720.1-201ENST00000604441 183 ntBASIC1.91□□□□□ -2.1
DDX11Q96FC9 RNU7-79P-201ENST00000516082 62 ntBASIC1.9□□□□□ -2.11
DDX11Q96FC9 SNORD111.1-201ENST00000516421 86 ntBASIC1.9□□□□□ -2.11
DDX11Q96FC9 Y_RNA.685-201ENST00000516532 108 ntBASIC1.9□□□□□ -2.11
DDX11Q96FC9 RNU6-267P-201ENST00000516714 103 ntBASIC1.9□□□□□ -2.11
DDX11Q96FC9 Y_RNA.705-201ENST00000516862 110 ntBASIC1.9□□□□□ -2.11
DDX11Q96FC9 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.9□□□□□ -2.11
DDX11Q96FC9 SNORD53B-201ENST00000577887 78 ntBASIC1.9□□□□□ -2.11
DDX11Q96FC9 AL512598.1-201ENST00000610158 273 ntBASIC1.9□□□□□ -2.11
DDX11Q96FC9 RNU6-675P-201ENST00000384236 104 ntBASIC1.89□□□□□ -2.11
DDX11Q96FC9 RNU6-887P-201ENST00000410660 100 ntBASIC1.89□□□□□ -2.11
DDX11Q96FC9 RNU6-402P-201ENST00000410678 103 ntBASIC1.89□□□□□ -2.11
DDX11Q96FC9 RNA5SP225-201ENST00000410874 135 ntBASIC1.89□□□□□ -2.11
DDX11Q96FC9 AC005908.1-201ENST00000468701 347 ntBASIC1.89□□□□□ -2.11
DDX11Q96FC9 SNORD67.1-201ENST00000516618 108 ntBASIC1.89□□□□□ -2.11
DDX11Q96FC9 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
DDX11Q96FC9 MIR376B-201ENST00000614515 100 ntBASIC1.89□□□□□ -2.11
DDX11Q96FC9 SEPT14P17-201ENST00000617978 177 ntBASIC1.89□□□□□ -2.11
DDX11Q96FC9 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
DDX11Q96FC9 SNORD114-10-201ENST00000363409 72 ntBASIC1.88□□□□□ -2.11
DDX11Q96FC9 RNU6-219P-201ENST00000364728 107 ntBASIC1.88□□□□□ -2.11
DDX11Q96FC9 SNORD38B-201ENST00000384690 67 ntBASIC1.88□□□□□ -2.11
DDX11Q96FC9 RNU6-997P-201ENST00000384725 107 ntBASIC1.88□□□□□ -2.11
DDX11Q96FC9 RNU6-972P-201ENST00000391208 107 ntBASIC1.88□□□□□ -2.11
DDX11Q96FC9 RNU7-137P-201ENST00000516788 62 ntBASIC1.88□□□□□ -2.11
DDX11Q96FC9 SNORD38B-202ENST00000625943 69 ntBASIC1.88□□□□□ -2.11
DDX11Q96FC9 MIR337-201ENST00000362281 93 ntBASIC1.87□□□□□ -2.11
DDX11Q96FC9 SNORD38.1-201ENST00000363863 68 ntBASIC1.87□□□□□ -2.11
DDX11Q96FC9 RNY1P1-201ENST00000364372 112 ntBASIC1.87□□□□□ -2.11
DDX11Q96FC9 RNU6-497P-201ENST00000365316 104 ntBASIC1.87□□□□□ -2.11
DDX11Q96FC9 RNU6-787P-201ENST00000384032 107 ntBASIC1.87□□□□□ -2.11
DDX11Q96FC9 RNU6-1124P-201ENST00000384169 107 ntBASIC1.87□□□□□ -2.11
DDX11Q96FC9 MIR34C-201ENST00000384831 77 ntBASIC1.87□□□□□ -2.11
DDX11Q96FC9 RNU6-321P-201ENST00000410912 106 ntBASIC1.87□□□□□ -2.11
DDX11Q96FC9 AC244023.1-201ENST00000426884 112 ntBASIC1.87□□□□□ -2.11
DDX11Q96FC9 AC109327.2-201ENST00000448339 378 ntBASIC1.87□□□□□ -2.11
DDX11Q96FC9 RNA5SP395-201ENST00000516567 118 ntBASIC1.87□□□□□ -2.11
DDX11Q96FC9 AC242498.1-201ENST00000604134 111 ntBASIC1.87□□□□□ -2.11
DDX11Q96FC9 PRELID3BP2-201ENST00000605362 201 ntBASIC1.87□□□□□ -2.11
DDX11Q96FC9 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.87□□□□□ -2.11
DDX11Q96FC9 SNORA25.3-201ENST00000363205 127 ntBASIC1.86□□□□□ -2.11
DDX11Q96FC9 RNA5SP48-201ENST00000363969 126 ntBASIC1.86□□□□□ -2.11
DDX11Q96FC9 RNU6-1163P-201ENST00000364516 107 ntBASIC1.86□□□□□ -2.11
DDX11Q96FC9 RNU6-813P-201ENST00000384691 107 ntBASIC1.86□□□□□ -2.11
DDX11Q96FC9 RNU6-1321P-201ENST00000390905 107 ntBASIC1.86□□□□□ -2.11
DDX11Q96FC9 RNU6-447P-201ENST00000410293 104 ntBASIC1.86□□□□□ -2.11
DDX11Q96FC9 RNU6-1118P-201ENST00000410382 104 ntBASIC1.86□□□□□ -2.11
DDX11Q96FC9 RNU6-1076P-201ENST00000410397 104 ntBASIC1.86□□□□□ -2.11
DDX11Q96FC9 RNU6-355P-201ENST00000410427 104 ntBASIC1.86□□□□□ -2.11
DDX11Q96FC9 RNU6-791P-201ENST00000410467 104 ntBASIC1.86□□□□□ -2.11
DDX11Q96FC9 RNU6-705P-201ENST00000410601 104 ntBASIC1.86□□□□□ -2.11
DDX11Q96FC9 RNU6-1100P-201ENST00000410691 104 ntBASIC1.86□□□□□ -2.11
DDX11Q96FC9 RNU6-860P-201ENST00000410860 104 ntBASIC1.86□□□□□ -2.11
DDX11Q96FC9 RNU6-1217P-201ENST00000411276 104 ntBASIC1.86□□□□□ -2.11
DDX11Q96FC9 RNU6-785P-201ENST00000411324 104 ntBASIC1.86□□□□□ -2.11
DDX11Q96FC9 U6.90-201ENST00000614007 104 ntBASIC1.86□□□□□ -2.11
DDX11Q96FC9 U6.70-201ENST00000620287 104 ntBASIC1.86□□□□□ -2.11
DDX11Q96FC9 AP000648.3-201ENST00000623539 4507 ntBASIC1.85□□□□□ -2.11
DDX11Q96FC9 MIR302D-201ENST00000362275 68 ntBASIC1.85□□□□□ -2.11
DDX11Q96FC9 RNU1-42P-201ENST00000364033 160 ntBASIC1.85□□□□□ -2.11
DDX11Q96FC9 RNY1P13-201ENST00000365030 105 ntBASIC1.85□□□□□ -2.11
DDX11Q96FC9 Y_RNA.448-201ENST00000384185 108 ntBASIC1.85□□□□□ -2.11
DDX11Q96FC9 RNU6-1237P-201ENST00000384777 107 ntBASIC1.85□□□□□ -2.11
DDX11Q96FC9 RPL39P39-201ENST00000455840 151 ntBASIC1.85□□□□□ -2.11
DDX11Q96FC9 RNU7-95P-201ENST00000459222 64 ntBASIC1.85□□□□□ -2.11
DDX11Q96FC9 TRMT112P2-201ENST00000512910 132 ntBASIC1.85□□□□□ -2.11
DDX11Q96FC9 MIR4285-201ENST00000581001 85 ntBASIC1.85□□□□□ -2.11
DDX11Q96FC9 MIR4422-201ENST00000581938 83 ntBASIC1.85□□□□□ -2.11
DDX11Q96FC9 AL359821.1-201ENST00000605519 182 ntBASIC1.85□□□□□ -2.11
DDX11Q96FC9 AC105081.1-201ENST00000617727 106 ntBASIC1.85□□□□□ -2.11
DDX11Q96FC9 SNORD58A-201ENST00000383875 65 ntBASIC1.84□□□□□ -2.11
DDX11Q96FC9 RNU6-979P-201ENST00000383896 107 ntBASIC1.84□□□□□ -2.11
DDX11Q96FC9 U8.15-201ENST00000390947 134 ntBASIC1.84□□□□□ -2.11
DDX11Q96FC9 MIR1255A-201ENST00000408338 113 ntBASIC1.84□□□□□ -2.11
DDX11Q96FC9 HSPE1P24-201ENST00000450782 238 ntBASIC1.84□□□□□ -2.11
DDX11Q96FC9 AL645939.4-201ENST00000604495 135 ntBASIC1.84□□□□□ -2.11
DDX11Q96FC9 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.84□□□□□ -2.11
DDX11Q96FC9 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.84□□□□□ -2.11
DDX11Q96FC9 SNORD33-201ENST00000362761 85 ntBASIC1.83□□□□□ -2.12
DDX11Q96FC9 RNU6-1276P-201ENST00000365372 104 ntBASIC1.83□□□□□ -2.12
DDX11Q96FC9 Y_RNA.620-201ENST00000411009 88 ntBASIC1.83□□□□□ -2.12
DDX11Q96FC9 RPS29P28-201ENST00000446439 141 ntBASIC1.83□□□□□ -2.12
DDX11Q96FC9 AC141846.1-201ENST00000568348 142 ntBASIC1.83□□□□□ -2.12
DDX11Q96FC9 AL357312.1-201ENST00000603879 298 ntBASIC1.83□□□□□ -2.12
DDX11Q96FC9 AC020891.4-201ENST00000605745 93 ntBASIC1.83□□□□□ -2.12
DDX11Q96FC9 IGLL4P-201ENST00000614590 133 ntBASIC1.83□□□□□ -2.12
DDX11Q96FC9 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.83□□□□□ -2.12
DDX11Q96FC9 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.82□□□□□ -2.12
DDX11Q96FC9 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
DDX11Q96FC9 SNORD116-10-201ENST00000363791 102 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms